RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 NISCHQ9Y2I1 1504 aa32.06■■■□□ 2.72
LDLRAP1-204ENST00000474283 CCDC180Q9P1Z9 1646 aa28.38■■■□□ 2.13
LDLRAP1-204ENST00000474283 ABCC9O60706 1549 aa27.27■■□□□ 1.96
LDLRAP1-204ENST00000474283 ZCCHC6Q5VYS8 1495 aaKnown RBP26.8■■□□□ 1.88
LDLRAP1-204ENST00000474283 DCAF8L2P0C7V8 631 aa26.67■■□□□ 1.86
LDLRAP1-204ENST00000474283 DCAF1Q9Y4B6 1507 aa26.5■■□□□ 1.83
LDLRAP1-204ENST00000474283 NACADO15069 1562 aa26.5■■□□□ 1.83
LDLRAP1-204ENST00000474283 RB1CC1Q8TDY2 1594 aa26.45■■□□□ 1.82
LDLRAP1-204ENST00000474283 MYO15BQ96JP2 1530 aa26.4■■□□□ 1.82
LDLRAP1-204ENST00000474283 UNC13AQ9UPW8 1703 aa26.03■■□□□ 1.76
LDLRAP1-204ENST00000474283 SCRIBQ14160 1630 aa25.97■■□□□ 1.75
LDLRAP1-204ENST00000474283 SHROOM4Q9ULL8 1493 aa25.72■■□□□ 1.71
LDLRAP1-204ENST00000474283 BICRAQ9NZM4 1560 aa25.61■■□□□ 1.69
LDLRAP1-204ENST00000474283 PABPN1Q86U42 306 aaKnown RBP eCLIP25.53■■□□□ 1.68
LDLRAP1-204ENST00000474283 DNAJC5BQ9UF47 199 aa25.16■■□□□ 1.62
LDLRAP1-204ENST00000474283 CECR2Q9BXF3 1484 aa24.93■■□□□ 1.58
LDLRAP1-204ENST00000474283 EIF4G1Q04637 1599 aaKnown RBP24.9■■□□□ 1.58
LDLRAP1-204ENST00000474283 SMARCA4P51532 1647 aa24.84■■□□□ 1.57
LDLRAP1-204ENST00000474283 BAZ1AQ9NRL2 1556 aaPredicted RBP24.84■■□□□ 1.57
LDLRAP1-204ENST00000474283 MROH2BQ7Z745 1585 aa24.74■■□□□ 1.55
LDLRAP1-204ENST00000474283 CC2D2AQ9P2K1 1620 aa24.72■■□□□ 1.55
LDLRAP1-204ENST00000474283 WIZO95785 1651 aa24.59■■□□□ 1.53
LDLRAP1-204ENST00000474283 RSF1Q96T23 1441 aaPredicted RBP24.58■■□□□ 1.53
LDLRAP1-204ENST00000474283 SMARCA2P51531 1590 aa24.54■■□□□ 1.52
LDLRAP1-204ENST00000474283 PEG3Q9GZU2 1588 aa24.51■■□□□ 1.51
LDLRAP1-204ENST00000474283 ATAD2BQ9ULI0 1458 aa24.5■■□□□ 1.51
LDLRAP1-204ENST00000474283 SUPT5HO00267 1087 aaKnown RBP24.42■■□□□ 1.5
LDLRAP1-204ENST00000474283 NCAPD3P42695 1498 aa24.37■■□□□ 1.49
LDLRAP1-204ENST00000474283 BAZ1BQ9UIG0 1483 aaKnown RBP24.37■■□□□ 1.49
LDLRAP1-204ENST00000474283 HMGXB3Q12766 1538 aa24.36■■□□□ 1.49
LDLRAP1-204ENST00000474283 TOP2AP11388 1531 aaKnown RBP24.28■■□□□ 1.48
LDLRAP1-204ENST00000474283 CCDC88BA6NC98 1476 aa23.96■■□□□ 1.43
LDLRAP1-204ENST00000474283 PRDM2Q13029 1718 aa23.79■■□□□ 1.4
LDLRAP1-204ENST00000474283 LAMC3Q9Y6N6 1575 aa23.74■■□□□ 1.39
LDLRAP1-204ENST00000474283 NESP48681 1621 aa23.74■■□□□ 1.39
LDLRAP1-204ENST00000474283 CADPSQ9ULU8 1353 aa23.7■■□□□ 1.38
LDLRAP1-204ENST00000474283 CFTRP13569 1480 aa23.67■■□□□ 1.38
LDLRAP1-204ENST00000474283 KIF21AQ7Z4S6 1674 aa23.6■■□□□ 1.37
LDLRAP1-204ENST00000474283 PDS5BQ9NTI5 1447 aa23.51■■□□□ 1.35
LDLRAP1-204ENST00000474283 FANCD2Q9BXW9 1451 aa23.49■■□□□ 1.35
LDLRAP1-204ENST00000474283 ERCC6Q03468 1493 aa23.48■■□□□ 1.35
LDLRAP1-204ENST00000474283 CEP164Q9UPV0 1460 aa23.43■■□□□ 1.34
LDLRAP1-204ENST00000474283 DNAJC5Q9H3Z4 198 aa23.34■■□□□ 1.33
LDLRAP1-204ENST00000474283 ABCC8Q09428 1581 aa23.32■■□□□ 1.32
LDLRAP1-204ENST00000474283 THOC2Q8NI27 1593 aaKnown RBP23.3■■□□□ 1.32
LDLRAP1-204ENST00000474283 MRC2Q9UBG0 1479 aa23.27■■□□□ 1.32
LDLRAP1-204ENST00000474283 URB2Q14146 1524 aaKnown RBP23.23■■□□□ 1.31
LDLRAP1-204ENST00000474283 DNMBPQ6XZF7 1577 aa23.21■■□□□ 1.31
LDLRAP1-204ENST00000474283 CUX1P39880 1505 aa23.19■■□□□ 1.3
LDLRAP1-204ENST00000474283 WRNQ14191 1432 aaPredicted RBP eCLIP23.19■■□□□ 1.3
LDLRAP1-204ENST00000474283 WDR62O43379 1518 aa23.18■■□□□ 1.3
LDLRAP1-204ENST00000474283 SYNJ1O43426 1573 aa23.18■■□□□ 1.3
LDLRAP1-204ENST00000474283 TOPBP1Q92547 1522 aa23.18■■□□□ 1.3
LDLRAP1-204ENST00000474283 BIVM-ERCC5R4GMW8 1640 aa23.17■■□□□ 1.3
LDLRAP1-204ENST00000474283 TOP2BQ02880 1626 aa23.14■■□□□ 1.29
LDLRAP1-204ENST00000474283 CUX2O14529 1486 aa23.11■■□□□ 1.29
LDLRAP1-204ENST00000474283 FGD5Q6ZNL6 1462 aa23.04■■□□□ 1.28
LDLRAP1-204ENST00000474283 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
LDLRAP1-204ENST00000474283 TRIM41Q8WV44 630 aa23■■□□□ 1.27
LDLRAP1-204ENST00000474283 POLA1P09884 1462 aaPredicted RBP22.99■■□□□ 1.27
LDLRAP1-204ENST00000474283 TARBP1Q13395 1621 aaKnown RBP22.92■■□□□ 1.26
LDLRAP1-204ENST00000474283 WDR97A6NE52 1622 aa22.91■■□□□ 1.26
LDLRAP1-204ENST00000474283 RAD54L2Q9Y4B4 1467 aa22.91■■□□□ 1.26
LDLRAP1-204ENST00000474283 SOGA1O94964 1423 aa22.91■■□□□ 1.26
LDLRAP1-204ENST00000474283 IFT140Q96RY7 1462 aa22.87■■□□□ 1.25
LDLRAP1-204ENST00000474283 ABCA10Q8WWZ4 1543 aa22.79■■□□□ 1.24
LDLRAP1-204ENST00000474283 EIF4G3O43432 1585 aaKnown RBP22.76■■□□□ 1.23
LDLRAP1-204ENST00000474283 ZNF608Q9ULD9 1512 aaPredicted RBP22.76■■□□□ 1.23
LDLRAP1-204ENST00000474283 PBRM1Q86U86 1689 aa22.74■■□□□ 1.23
LDLRAP1-204ENST00000474283 ABCA5Q8WWZ7 1642 aa22.73■■□□□ 1.23
LDLRAP1-204ENST00000474283 TDRD9Q8NDG6 1382 aaKnown RBP22.72■■□□□ 1.23
LDLRAP1-204ENST00000474283 AQRO60306 1485 aaKnown RBP eCLIP22.69■■□□□ 1.221e-6■■■■■ 43.1
LDLRAP1-204ENST00000474283 GAPVD1Q14C86 1478 aa22.66■■□□□ 1.22
LDLRAP1-204ENST00000474283 KIF27Q86VH2 1401 aa22.66■■□□□ 1.22
LDLRAP1-204ENST00000474283 RUSC2Q8N2Y8 1516 aa22.65■■□□□ 1.22
LDLRAP1-204ENST00000474283 GRIN2BQ13224 1484 aa22.58■■□□□ 1.2
LDLRAP1-204ENST00000474283 FAM9AQ8IZU1 332 aaPredicted RBP22.57■■□□□ 1.2
LDLRAP1-204ENST00000474283 ERICH3Q5RHP9 1530 aa22.55■■□□□ 1.2
LDLRAP1-204ENST00000474283 EEA1Q15075 1411 aa22.54■■□□□ 1.2
LDLRAP1-204ENST00000474283 CUL7Q14999 1698 aa22.52■■□□□ 1.2
LDLRAP1-204ENST00000474283 SNAPC4Q5SXM2 1469 aa22.52■■□□□ 1.2
LDLRAP1-204ENST00000474283 ADAMTS12P58397 1594 aa22.48■■□□□ 1.19
LDLRAP1-204ENST00000474283 CHD1O14646 1710 aa22.48■■□□□ 1.19
LDLRAP1-204ENST00000474283 IGF1RP08069 1367 aa22.47■■□□□ 1.19
LDLRAP1-204ENST00000474283 MAGI1Q96QZ7 1491 aaPredicted RBP22.47■■□□□ 1.19
LDLRAP1-204ENST00000474283 CSRNP3Q8WYN3 585 aa22.44■■□□□ 1.18
LDLRAP1-204ENST00000474283 FHAD1B1AJZ9 1412 aa22.39■■□□□ 1.17
LDLRAP1-204ENST00000474283 CARMIL1Q5VZK9 1371 aa22.38■■□□□ 1.17
LDLRAP1-204ENST00000474283 SYNJ2O15056 1496 aa22.37■■□□□ 1.17
LDLRAP1-204ENST00000474283 FBLN2P98095 1184 aa22.37■■□□□ 1.17
LDLRAP1-204ENST00000474283 KIF21BO75037 1637 aa22.35■■□□□ 1.17
LDLRAP1-204ENST00000474283 CHMP7Q8WUX9 453 aaPredicted RBP22.33■■□□□ 1.17
LDLRAP1-204ENST00000474283 RAPGEF2Q9Y4G8 1499 aa22.33■■□□□ 1.16
LDLRAP1-204ENST00000474283 PRXQ9BXM0 1461 aa22.32■■□□□ 1.16
LDLRAP1-204ENST00000474283 GRIN2AQ12879 1464 aa22.3■■□□□ 1.16
LDLRAP1-204ENST00000474283 EHMT2Q96KQ7 1210 aa22.3■■□□□ 1.16
LDLRAP1-204ENST00000474283 CTTNBP2Q8WZ74 1663 aa22.26■■□□□ 1.15
LDLRAP1-204ENST00000474283 GOLGA3Q08378 1498 aa22.22■■□□□ 1.15
LDLRAP1-204ENST00000474283 CEP170Q5SW79 1584 aa22.21■■□□□ 1.15
LDLRAP1-204ENST00000474283 UBTFP17480 764 aaKnown RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms