RNA–Protein interactions for RNA: ENST00000474270.1

ABCD4-207, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-207ENST00000474270 NISCHQ9Y2I1 1504 aa31.78■■■□□ 2.68
ABCD4-207ENST00000474270 CCDC180Q9P1Z9 1646 aa28.6■■■□□ 2.17
ABCD4-207ENST00000474270 ABCC9O60706 1549 aa28.53■■■□□ 2.16
ABCD4-207ENST00000474270 RB1CC1Q8TDY2 1594 aa27.11■■□□□ 1.93
ABCD4-207ENST00000474270 NACADO15069 1562 aa26.9■■□□□ 1.9
ABCD4-207ENST00000474270 DNAJC5BQ9UF47 199 aa26.89■■□□□ 1.9
ABCD4-207ENST00000474270 DCAF8L2P0C7V8 631 aa26.84■■□□□ 1.89
ABCD4-207ENST00000474270 UNC13AQ9UPW8 1703 aa26.76■■□□□ 1.87
ABCD4-207ENST00000474270 PABPN1Q86U42 306 aaKnown RBP eCLIP26.6■■□□□ 1.853e-10■□□□□ 10.9
ABCD4-207ENST00000474270 MYO15BQ96JP2 1530 aa26.48■■□□□ 1.83
ABCD4-207ENST00000474270 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
ABCD4-207ENST00000474270 BICRAQ9NZM4 1560 aa26.34■■□□□ 1.81
ABCD4-207ENST00000474270 DCAF1Q9Y4B6 1507 aa26.21■■□□□ 1.79
ABCD4-207ENST00000474270 SCRIBQ14160 1630 aa26.08■■□□□ 1.77
ABCD4-207ENST00000474270 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
ABCD4-207ENST00000474270 CC2D2AQ9P2K1 1620 aa25.74■■□□□ 1.71
ABCD4-207ENST00000474270 CECR2Q9BXF3 1484 aa25.69■■□□□ 1.7
ABCD4-207ENST00000474270 EIF4G1Q04637 1599 aaKnown RBP25.67■■□□□ 1.7
ABCD4-207ENST00000474270 SMARCA4P51532 1647 aa24.86■■□□□ 1.57
ABCD4-207ENST00000474270 DNAJC5Q9H3Z4 198 aa24.76■■□□□ 1.55
ABCD4-207ENST00000474270 NCAPD3P42695 1498 aa24.76■■□□□ 1.55
ABCD4-207ENST00000474270 ATAD2BQ9ULI0 1458 aa24.74■■□□□ 1.55
ABCD4-207ENST00000474270 SMARCA2P51531 1590 aa24.71■■□□□ 1.55
ABCD4-207ENST00000474270 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
ABCD4-207ENST00000474270 HMGXB3Q12766 1538 aa24.66■■□□□ 1.54
ABCD4-207ENST00000474270 ERCC6Q03468 1493 aa24.64■■□□□ 1.54
ABCD4-207ENST00000474270 CUX2O14529 1486 aa24.58■■□□□ 1.52
ABCD4-207ENST00000474270 BAZ1BQ9UIG0 1483 aaKnown RBP24.54■■□□□ 1.52
ABCD4-207ENST00000474270 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
ABCD4-207ENST00000474270 MROH2BQ7Z745 1585 aa24.53■■□□□ 1.52
ABCD4-207ENST00000474270 NESP48681 1621 aa24.47■■□□□ 1.51
ABCD4-207ENST00000474270 WIZO95785 1651 aa24.34■■□□□ 1.49
ABCD4-207ENST00000474270 KIF21AQ7Z4S6 1674 aa24.32■■□□□ 1.48
ABCD4-207ENST00000474270 LAMC3Q9Y6N6 1575 aa24.29■■□□□ 1.48
ABCD4-207ENST00000474270 THOC2Q8NI27 1593 aaKnown RBP24.25■■□□□ 1.47
ABCD4-207ENST00000474270 PDS5BQ9NTI5 1447 aa24.11■■□□□ 1.45
ABCD4-207ENST00000474270 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
ABCD4-207ENST00000474270 RSF1Q96T23 1441 aaPredicted RBP23.98■■□□□ 1.43
ABCD4-207ENST00000474270 TOP2AP11388 1531 aaKnown RBP23.94■■□□□ 1.42
ABCD4-207ENST00000474270 MRC2Q9UBG0 1479 aa23.9■■□□□ 1.42
ABCD4-207ENST00000474270 PRDM2Q13029 1718 aa23.87■■□□□ 1.41
ABCD4-207ENST00000474270 WDR62O43379 1518 aa23.86■■□□□ 1.41
ABCD4-207ENST00000474270 CEP164Q9UPV0 1460 aa23.84■■□□□ 1.41
ABCD4-207ENST00000474270 FANCD2Q9BXW9 1451 aa23.81■■□□□ 1.4
ABCD4-207ENST00000474270 CFTRP13569 1480 aa23.78■■□□□ 1.4
ABCD4-207ENST00000474270 TRIM41Q8WV44 630 aa23.73■■□□□ 1.39
ABCD4-207ENST00000474270 URB2Q14146 1524 aaKnown RBP23.64■■□□□ 1.37
ABCD4-207ENST00000474270 CCDC88BA6NC98 1476 aa23.63■■□□□ 1.37
ABCD4-207ENST00000474270 OSCARQ8IYS5 282 aa23.5■■□□□ 1.35
ABCD4-207ENST00000474270 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
ABCD4-207ENST00000474270 DNMBPQ6XZF7 1577 aa23.34■■□□□ 1.33
ABCD4-207ENST00000474270 ZNF608Q9ULD9 1512 aaPredicted RBP23.33■■□□□ 1.32
ABCD4-207ENST00000474270 IFT140Q96RY7 1462 aa23.31■■□□□ 1.32
ABCD4-207ENST00000474270 EIF4G3O43432 1585 aaKnown RBP23.29■■□□□ 1.32
ABCD4-207ENST00000474270 ABCC8Q09428 1581 aa23.28■■□□□ 1.32
ABCD4-207ENST00000474270 TARBP1Q13395 1621 aaKnown RBP23.23■■□□□ 1.31
ABCD4-207ENST00000474270 CHD1O14646 1710 aa23.21■■□□□ 1.31
ABCD4-207ENST00000474270 RIMBP3CA6NJZ7 1639 aa23.16■■□□□ 1.3
ABCD4-207ENST00000474270 RIMBP3BA6NNM3 1639 aa23.16■■□□□ 1.3
ABCD4-207ENST00000474270 RIMBP3Q9UFD9 1639 aa23.16■■□□□ 1.3
ABCD4-207ENST00000474270 POLA1P09884 1462 aaPredicted RBP23.14■■□□□ 1.29
ABCD4-207ENST00000474270 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.293e-9■■■■□ 21.9
ABCD4-207ENST00000474270 ARHGEF11O15085 1522 aa23.08■■□□□ 1.28
ABCD4-207ENST00000474270 RAD54L2Q9Y4B4 1467 aa23.07■■□□□ 1.28
ABCD4-207ENST00000474270 FBLN2P98095 1184 aa23.06■■□□□ 1.28
ABCD4-207ENST00000474270 CUX1P39880 1505 aa23.04■■□□□ 1.28
ABCD4-207ENST00000474270 FGD5Q6ZNL6 1462 aa23.04■■□□□ 1.28
ABCD4-207ENST00000474270 SUPT5HO00267 1087 aaKnown RBP23.03■■□□□ 1.28
ABCD4-207ENST00000474270 CYB5RLQ6IPT4 315 aa23.01■■□□□ 1.27
ABCD4-207ENST00000474270 WDR97A6NE52 1622 aa23■■□□□ 1.27
ABCD4-207ENST00000474270 SOGA1O94964 1423 aa22.99■■□□□ 1.27
ABCD4-207ENST00000474270 TDRD9Q8NDG6 1382 aaKnown RBP22.96■■□□□ 1.27
ABCD4-207ENST00000474270 PBRM1Q86U86 1689 aa22.96■■□□□ 1.27
ABCD4-207ENST00000474270 SNAPC4Q5SXM2 1469 aa22.9■■□□□ 1.26
ABCD4-207ENST00000474270 ARAP1Q96P48 1450 aa22.85■■□□□ 1.25
ABCD4-207ENST00000474270 CHMP7Q8WUX9 453 aaPredicted RBP22.83■■□□□ 1.25
ABCD4-207ENST00000474270 TRHP20396 242 aaPredicted RBP22.82■■□□□ 1.24
ABCD4-207ENST00000474270 GRIN2BQ13224 1484 aa22.79■■□□□ 1.24
ABCD4-207ENST00000474270 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
ABCD4-207ENST00000474270 ABCA5Q8WWZ7 1642 aa22.79■■□□□ 1.24
ABCD4-207ENST00000474270 BIVM-ERCC5R4GMW8 1640 aa22.78■■□□□ 1.24
ABCD4-207ENST00000474270 SYNJ1O43426 1573 aa22.77■■□□□ 1.24
ABCD4-207ENST00000474270 CLASP1Q7Z460 1538 aa22.77■■□□□ 1.24
ABCD4-207ENST00000474270 GAPVD1Q14C86 1478 aa22.74■■□□□ 1.23
ABCD4-207ENST00000474270 ABCA10Q8WWZ4 1543 aa22.73■■□□□ 1.23
ABCD4-207ENST00000474270 SYNJ2O15056 1496 aa22.73■■□□□ 1.23
ABCD4-207ENST00000474270 TOP2BQ02880 1626 aa22.72■■□□□ 1.23
ABCD4-207ENST00000474270 WRNQ14191 1432 aaPredicted RBP eCLIP22.63■■□□□ 1.21
ABCD4-207ENST00000474270 ADAMTS12P58397 1594 aa22.61■■□□□ 1.21
ABCD4-207ENST00000474270 GRIN2AQ12879 1464 aa22.54■■□□□ 1.2
ABCD4-207ENST00000474270 CEP170Q5SW79 1584 aa22.52■■□□□ 1.2
ABCD4-207ENST00000474270 ERICH3Q5RHP9 1530 aa22.47■■□□□ 1.19
ABCD4-207ENST00000474270 ERCC6L2Q5T890 1561 aa22.47■■□□□ 1.19
ABCD4-207ENST00000474270 FHAD1B1AJZ9 1412 aa22.43■■□□□ 1.18
ABCD4-207ENST00000474270 SHROOM2Q13796 1616 aa22.42■■□□□ 1.18
ABCD4-207ENST00000474270 NUP160Q12769 1436 aa22.4■■□□□ 1.18
ABCD4-207ENST00000474270 RUSC2Q8N2Y8 1516 aa22.3■■□□□ 1.16
ABCD4-207ENST00000474270 CUL7Q14999 1698 aa22.26■■□□□ 1.15
ABCD4-207ENST00000474270 AEBP2Q6ZN18 517 aaPredicted RBP22.25■■□□□ 1.15
ABCD4-207ENST00000474270 PRG4Q92954 1404 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms