RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 NISCHQ9Y2I1 1504 aa39.22■■■■□ 3.87
CDPF1-205ENST00000474256 CCDC180Q9P1Z9 1646 aa35■■■■□ 3.19
CDPF1-205ENST00000474256 ABCC9O60706 1549 aa34.79■■■■□ 3.16
CDPF1-205ENST00000474256 RB1CC1Q8TDY2 1594 aa33.22■■■□□ 2.91
CDPF1-205ENST00000474256 NACADO15069 1562 aa33.09■■■□□ 2.89
CDPF1-205ENST00000474256 DCAF8L2P0C7V8 631 aa32.97■■■□□ 2.87
CDPF1-205ENST00000474256 MYO15BQ96JP2 1530 aa32.77■■■□□ 2.84
CDPF1-205ENST00000474256 ZCCHC6Q5VYS8 1495 aaKnown RBP32.56■■■□□ 2.8
CDPF1-205ENST00000474256 PABPN1Q86U42 306 aaKnown RBP eCLIP32.47■■■□□ 2.79
CDPF1-205ENST00000474256 DNAJC5BQ9UF47 199 aa32.46■■■□□ 2.79
CDPF1-205ENST00000474256 DCAF1Q9Y4B6 1507 aa32.44■■■□□ 2.78
CDPF1-205ENST00000474256 UNC13AQ9UPW8 1703 aa32.37■■■□□ 2.77
CDPF1-205ENST00000474256 BICRAQ9NZM4 1560 aa32.26■■■□□ 2.75
CDPF1-205ENST00000474256 SCRIBQ14160 1630 aa31.91■■■□□ 2.7
CDPF1-205ENST00000474256 SHROOM4Q9ULL8 1493 aa31.9■■■□□ 2.7
CDPF1-205ENST00000474256 EIF4G1Q04637 1599 aaKnown RBP31.44■■■□□ 2.62
CDPF1-205ENST00000474256 CC2D2AQ9P2K1 1620 aa31.42■■■□□ 2.62
CDPF1-205ENST00000474256 CECR2Q9BXF3 1484 aa31.33■■■□□ 2.61
CDPF1-205ENST00000474256 NCAPD3P42695 1498 aa30.59■■■□□ 2.49
CDPF1-205ENST00000474256 ATAD2BQ9ULI0 1458 aa30.51■■■□□ 2.48
CDPF1-205ENST00000474256 SMARCA4P51532 1647 aa30.49■■■□□ 2.47
CDPF1-205ENST00000474256 SMARCA2P51531 1590 aa30.41■■■□□ 2.46
CDPF1-205ENST00000474256 BAZ1AQ9NRL2 1556 aaPredicted RBP30.41■■■□□ 2.46
CDPF1-205ENST00000474256 HMGXB3Q12766 1538 aa30.34■■■□□ 2.45
CDPF1-205ENST00000474256 PEG3Q9GZU2 1588 aa30.24■■■□□ 2.43
CDPF1-205ENST00000474256 MROH2BQ7Z745 1585 aa30.21■■■□□ 2.43
CDPF1-205ENST00000474256 BAZ1BQ9UIG0 1483 aaKnown RBP30.2■■■□□ 2.43
CDPF1-205ENST00000474256 ERCC6Q03468 1493 aa30.01■■■□□ 2.4
CDPF1-205ENST00000474256 NESP48681 1621 aa29.96■■■□□ 2.39
CDPF1-205ENST00000474256 CUX2O14529 1486 aa29.9■■■□□ 2.38
CDPF1-205ENST00000474256 WIZO95785 1651 aa29.81■■■□□ 2.36
CDPF1-205ENST00000474256 LAMC3Q9Y6N6 1575 aa29.79■■■□□ 2.36
CDPF1-205ENST00000474256 RSF1Q96T23 1441 aaPredicted RBP29.72■■■□□ 2.35
CDPF1-205ENST00000474256 CADPSQ9ULU8 1353 aa29.67■■■□□ 2.34
CDPF1-205ENST00000474256 PDS5BQ9NTI5 1447 aa29.65■■■□□ 2.34
CDPF1-205ENST00000474256 DNAJC5Q9H3Z4 198 aa29.62■■■□□ 2.33
CDPF1-205ENST00000474256 THOC2Q8NI27 1593 aaKnown RBP29.58■■■□□ 2.33
CDPF1-205ENST00000474256 KIF21AQ7Z4S6 1674 aa29.51■■■□□ 2.31
CDPF1-205ENST00000474256 TOP2AP11388 1531 aaKnown RBP29.5■■■□□ 2.31
CDPF1-205ENST00000474256 CFTRP13569 1480 aa29.38■■■□□ 2.29
CDPF1-205ENST00000474256 MRC2Q9UBG0 1479 aa29.36■■■□□ 2.29
CDPF1-205ENST00000474256 FANCD2Q9BXW9 1451 aa29.29■■■□□ 2.28
CDPF1-205ENST00000474256 CEP164Q9UPV0 1460 aa29.29■■■□□ 2.28
CDPF1-205ENST00000474256 WDR62O43379 1518 aa29.28■■■□□ 2.28
CDPF1-205ENST00000474256 CCDC88BA6NC98 1476 aa29.18■■■□□ 2.26
CDPF1-205ENST00000474256 URB2Q14146 1524 aaKnown RBP29.04■■■□□ 2.24
CDPF1-205ENST00000474256 PRDM2Q13029 1718 aa28.94■■■□□ 2.22
CDPF1-205ENST00000474256 TOPBP1Q92547 1522 aa28.76■■■□□ 2.19
CDPF1-205ENST00000474256 ABCC8Q09428 1581 aa28.74■■■□□ 2.19
CDPF1-205ENST00000474256 IFT140Q96RY7 1462 aa28.72■■■□□ 2.19
CDPF1-205ENST00000474256 DNMBPQ6XZF7 1577 aa28.67■■■□□ 2.18
CDPF1-205ENST00000474256 ZNF608Q9ULD9 1512 aaPredicted RBP28.64■■■□□ 2.17
CDPF1-205ENST00000474256 OSCARQ8IYS5 282 aa28.61■■■□□ 2.17
CDPF1-205ENST00000474256 SUPT5HO00267 1087 aaKnown RBP28.57■■■□□ 2.16
CDPF1-205ENST00000474256 POLA1P09884 1462 aaPredicted RBP28.5■■■□□ 2.15
CDPF1-205ENST00000474256 TARBP1Q13395 1621 aaKnown RBP28.47■■■□□ 2.15
CDPF1-205ENST00000474256 EIF4G3O43432 1585 aaKnown RBP28.44■■■□□ 2.14
CDPF1-205ENST00000474256 AQRO60306 1485 aaKnown RBP eCLIP28.42■■■□□ 2.14
CDPF1-205ENST00000474256 RAD54L2Q9Y4B4 1467 aa28.39■■■□□ 2.13
CDPF1-205ENST00000474256 SOGA1O94964 1423 aa28.38■■■□□ 2.13
CDPF1-205ENST00000474256 TRIM41Q8WV44 630 aa28.36■■■□□ 2.13
CDPF1-205ENST00000474256 CUX1P39880 1505 aa28.36■■■□□ 2.13
CDPF1-205ENST00000474256 FGD5Q6ZNL6 1462 aa28.34■■■□□ 2.13
CDPF1-205ENST00000474256 TDRD9Q8NDG6 1382 aaKnown RBP28.3■■■□□ 2.12
CDPF1-205ENST00000474256 WDR97A6NE52 1622 aa28.21■■■□□ 2.11
CDPF1-205ENST00000474256 FBLN2P98095 1184 aa28.16■■■□□ 2.1
CDPF1-205ENST00000474256 CHD1O14646 1710 aa28.12■■■□□ 2.09
CDPF1-205ENST00000474256 RIMBP3CA6NJZ7 1639 aa28.12■■■□□ 2.09
CDPF1-205ENST00000474256 RIMBP3BA6NNM3 1639 aa28.12■■■□□ 2.09
CDPF1-205ENST00000474256 RIMBP3Q9UFD9 1639 aa28.12■■■□□ 2.09
CDPF1-205ENST00000474256 SNAPC4Q5SXM2 1469 aa28.12■■■□□ 2.09
CDPF1-205ENST00000474256 GRIN2BQ13224 1484 aa28.1■■■□□ 2.09
CDPF1-205ENST00000474256 ARHGEF11O15085 1522 aa28.1■■■□□ 2.09
CDPF1-205ENST00000474256 MAGI1Q96QZ7 1491 aaPredicted RBP28.07■■■□□ 2.08
CDPF1-205ENST00000474256 ABCA10Q8WWZ4 1543 aa28.06■■■□□ 2.08
CDPF1-205ENST00000474256 GAPVD1Q14C86 1478 aa28.03■■■□□ 2.08
CDPF1-205ENST00000474256 CHMP7Q8WUX9 453 aaPredicted RBP28.03■■■□□ 2.08
CDPF1-205ENST00000474256 WRNQ14191 1432 aaPredicted RBP eCLIP28.01■■■□□ 2.08
CDPF1-205ENST00000474256 SYNJ2O15056 1496 aa27.98■■■□□ 2.07
CDPF1-205ENST00000474256 TOP2BQ02880 1626 aa27.97■■■□□ 2.07
CDPF1-205ENST00000474256 ABCA5Q8WWZ7 1642 aa27.95■■■□□ 2.06
CDPF1-205ENST00000474256 BIVM-ERCC5R4GMW8 1640 aa27.94■■■□□ 2.06
CDPF1-205ENST00000474256 SYNJ1O43426 1573 aa27.94■■■□□ 2.06
CDPF1-205ENST00000474256 CYB5RLQ6IPT4 315 aa27.9■■■□□ 2.06
CDPF1-205ENST00000474256 CLASP1Q7Z460 1538 aa27.9■■■□□ 2.06
CDPF1-205ENST00000474256 PBRM1Q86U86 1689 aa27.9■■■□□ 2.06
CDPF1-205ENST00000474256 ARAP1Q96P48 1450 aa27.85■■■□□ 2.05
CDPF1-205ENST00000474256 GRIN2AQ12879 1464 aa27.73■■■□□ 2.03
CDPF1-205ENST00000474256 ADAMTS12P58397 1594 aa27.72■■■□□ 2.03
CDPF1-205ENST00000474256 FHAD1B1AJZ9 1412 aa27.71■■■□□ 2.03
CDPF1-205ENST00000474256 ERICH3Q5RHP9 1530 aa27.7■■■□□ 2.02
CDPF1-205ENST00000474256 NUP160Q12769 1436 aa27.66■■■□□ 2.02
CDPF1-205ENST00000474256 CEP170Q5SW79 1584 aa27.6■■■□□ 2.01
CDPF1-205ENST00000474256 TRHP20396 242 aaPredicted RBP27.48■■□□□ 1.99
CDPF1-205ENST00000474256 ERCC6L2Q5T890 1561 aa27.48■■□□□ 1.99
CDPF1-205ENST00000474256 KIF27Q86VH2 1401 aa27.47■■□□□ 1.99
CDPF1-205ENST00000474256 IGF1RP08069 1367 aa27.46■■□□□ 1.99
CDPF1-205ENST00000474256 SHROOM2Q13796 1616 aa27.45■■□□□ 1.98
CDPF1-205ENST00000474256 JPH4Q96JJ6 628 aa27.39■■□□□ 1.98
CDPF1-205ENST00000474256 PRG4Q92954 1404 aaPredicted RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms