RNA–Protein interactions for RNA: ENST00000474251.5

PDE6B-208, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-208ENST00000474251 NISCHQ9Y2I1 1504 aa45.51■■■■■ 4.88
PDE6B-208ENST00000474251 CCDC180Q9P1Z9 1646 aa40.97■■■■■ 4.15
PDE6B-208ENST00000474251 ABCC9O60706 1549 aa40.73■■■■■ 4.11
PDE6B-208ENST00000474251 RB1CC1Q8TDY2 1594 aa38.87■■■■□ 3.81
PDE6B-208ENST00000474251 NACADO15069 1562 aa38.61■■■■□ 3.77
PDE6B-208ENST00000474251 UNC13AQ9UPW8 1703 aa38.22■■■■□ 3.71
PDE6B-208ENST00000474251 DCAF8L2P0C7V8 631 aa38.15■■■■□ 3.7
PDE6B-208ENST00000474251 MYO15BQ96JP2 1530 aa38.1■■■■□ 3.69
PDE6B-208ENST00000474251 DNAJC5BQ9UF47 199 aa38.09■■■■□ 3.69
PDE6B-208ENST00000474251 PABPN1Q86U42 306 aaKnown RBP eCLIP37.82■■■■□ 3.64
PDE6B-208ENST00000474251 BICRAQ9NZM4 1560 aa37.78■■■■□ 3.64
PDE6B-208ENST00000474251 ZCCHC6Q5VYS8 1495 aaKnown RBP37.76■■■■□ 3.63
PDE6B-208ENST00000474251 DCAF1Q9Y4B6 1507 aa37.62■■■■□ 3.61
PDE6B-208ENST00000474251 SCRIBQ14160 1630 aa37.25■■■■□ 3.55
PDE6B-208ENST00000474251 SHROOM4Q9ULL8 1493 aa37.25■■■■□ 3.55
PDE6B-208ENST00000474251 CC2D2AQ9P2K1 1620 aa36.9■■■■□ 3.5
PDE6B-208ENST00000474251 EIF4G1Q04637 1599 aaKnown RBP36.82■■■■□ 3.48
PDE6B-208ENST00000474251 CECR2Q9BXF3 1484 aa36.69■■■■□ 3.46
PDE6B-208ENST00000474251 NCAPD3P42695 1498 aa35.58■■■■□ 3.29
PDE6B-208ENST00000474251 SMARCA4P51532 1647 aa35.57■■■■□ 3.28
PDE6B-208ENST00000474251 ATAD2BQ9ULI0 1458 aa35.49■■■■□ 3.27
PDE6B-208ENST00000474251 SMARCA2P51531 1590 aa35.44■■■■□ 3.26
PDE6B-208ENST00000474251 HMGXB3Q12766 1538 aa35.42■■■■□ 3.26
PDE6B-208ENST00000474251 BAZ1AQ9NRL2 1556 aaPredicted RBP35.34■■■■□ 3.25
PDE6B-208ENST00000474251 PEG3Q9GZU2 1588 aa35.22■■■■□ 3.23
PDE6B-208ENST00000474251 ERCC6Q03468 1493 aa35.16■■■■□ 3.22
PDE6B-208ENST00000474251 BAZ1BQ9UIG0 1483 aaKnown RBP35.16■■■■□ 3.22
PDE6B-208ENST00000474251 CUX2O14529 1486 aa35.14■■■■□ 3.22
PDE6B-208ENST00000474251 MROH2BQ7Z745 1585 aa35.07■■■■□ 3.2
PDE6B-208ENST00000474251 NESP48681 1621 aa35.03■■■■□ 3.2
PDE6B-208ENST00000474251 DNAJC5Q9H3Z4 198 aa34.93■■■■□ 3.18
PDE6B-208ENST00000474251 LAMC3Q9Y6N6 1575 aa34.86■■■■□ 3.17
PDE6B-208ENST00000474251 THOC2Q8NI27 1593 aaKnown RBP34.8■■■■□ 3.16
PDE6B-208ENST00000474251 KIF21AQ7Z4S6 1674 aa34.75■■■■□ 3.15
PDE6B-208ENST00000474251 WIZO95785 1651 aa34.72■■■■□ 3.15
PDE6B-208ENST00000474251 PDS5BQ9NTI5 1447 aa34.53■■■■□ 3.12
PDE6B-208ENST00000474251 CADPSQ9ULU8 1353 aa34.46■■■■□ 3.11
PDE6B-208ENST00000474251 MRC2Q9UBG0 1479 aa34.3■■■■□ 3.08
PDE6B-208ENST00000474251 RSF1Q96T23 1441 aaPredicted RBP34.3■■■■□ 3.08
PDE6B-208ENST00000474251 WDR62O43379 1518 aa34.27■■■■□ 3.08
PDE6B-208ENST00000474251 TOP2AP11388 1531 aaKnown RBP34.25■■■■□ 3.07
PDE6B-208ENST00000474251 CEP164Q9UPV0 1460 aa34.17■■■■□ 3.06
PDE6B-208ENST00000474251 CFTRP13569 1480 aa34.13■■■■□ 3.05
PDE6B-208ENST00000474251 FANCD2Q9BXW9 1451 aa34.11■■■■□ 3.05
PDE6B-208ENST00000474251 PRDM2Q13029 1718 aa34.08■■■■□ 3.05
PDE6B-208ENST00000474251 URB2Q14146 1524 aaKnown RBP33.87■■■■□ 3.01
PDE6B-208ENST00000474251 CCDC88BA6NC98 1476 aa33.78■■■■□ 3
PDE6B-208ENST00000474251 TOPBP1Q92547 1522 aa33.51■■■□□ 2.95
PDE6B-208ENST00000474251 IFT140Q96RY7 1462 aa33.47■■■□□ 2.95
PDE6B-208ENST00000474251 DNMBPQ6XZF7 1577 aa33.43■■■□□ 2.94
PDE6B-208ENST00000474251 ZNF608Q9ULD9 1512 aaPredicted RBP33.42■■■□□ 2.94
PDE6B-208ENST00000474251 ABCC8Q09428 1581 aa33.4■■■□□ 2.94
PDE6B-208ENST00000474251 TRIM41Q8WV44 630 aa33.39■■■□□ 2.94
PDE6B-208ENST00000474251 OSCARQ8IYS5 282 aa33.38■■■□□ 2.93
PDE6B-208ENST00000474251 EIF4G3O43432 1585 aaKnown RBP33.34■■■□□ 2.93
PDE6B-208ENST00000474251 TARBP1Q13395 1621 aaKnown RBP33.28■■■□□ 2.92
PDE6B-208ENST00000474251 RIMBP3CA6NJZ7 1639 aa33.17■■■□□ 2.9
PDE6B-208ENST00000474251 RIMBP3BA6NNM3 1639 aa33.17■■■□□ 2.9
PDE6B-208ENST00000474251 RIMBP3Q9UFD9 1639 aa33.17■■■□□ 2.9
PDE6B-208ENST00000474251 CHD1O14646 1710 aa33.16■■■□□ 2.9
PDE6B-208ENST00000474251 POLA1P09884 1462 aaPredicted RBP33.16■■■□□ 2.9
PDE6B-208ENST00000474251 AQRO60306 1485 aaKnown RBP eCLIP33.07■■■□□ 2.88
PDE6B-208ENST00000474251 ARHGEF11O15085 1522 aa33.01■■■□□ 2.87
PDE6B-208ENST00000474251 RAD54L2Q9Y4B4 1467 aa33■■■□□ 2.87
PDE6B-208ENST00000474251 WDR97A6NE52 1622 aa32.96■■■□□ 2.87
PDE6B-208ENST00000474251 FGD5Q6ZNL6 1462 aa32.96■■■□□ 2.87
PDE6B-208ENST00000474251 CUX1P39880 1505 aa32.96■■■□□ 2.87
PDE6B-208ENST00000474251 SOGA1O94964 1423 aa32.93■■■□□ 2.86
PDE6B-208ENST00000474251 TDRD9Q8NDG6 1382 aaKnown RBP32.83■■■□□ 2.85
PDE6B-208ENST00000474251 SNAPC4Q5SXM2 1469 aa32.8■■■□□ 2.84
PDE6B-208ENST00000474251 PBRM1Q86U86 1689 aa32.77■■■□□ 2.84
PDE6B-208ENST00000474251 FBLN2P98095 1184 aa32.73■■■□□ 2.83
PDE6B-208ENST00000474251 MAGI1Q96QZ7 1491 aaPredicted RBP32.72■■■□□ 2.83
PDE6B-208ENST00000474251 GRIN2BQ13224 1484 aa32.68■■■□□ 2.82
PDE6B-208ENST00000474251 ARAP1Q96P48 1450 aa32.68■■■□□ 2.82
PDE6B-208ENST00000474251 CLASP1Q7Z460 1538 aa32.68■■■□□ 2.82
PDE6B-208ENST00000474251 SUPT5HO00267 1087 aaKnown RBP32.67■■■□□ 2.82
PDE6B-208ENST00000474251 SYNJ1O43426 1573 aa32.65■■■□□ 2.82
PDE6B-208ENST00000474251 ABCA5Q8WWZ7 1642 aa32.63■■■□□ 2.81
PDE6B-208ENST00000474251 ABCA10Q8WWZ4 1543 aa32.6■■■□□ 2.81
PDE6B-208ENST00000474251 CYB5RLQ6IPT4 315 aa32.59■■■□□ 2.81
PDE6B-208ENST00000474251 SYNJ2O15056 1496 aa32.59■■■□□ 2.81
PDE6B-208ENST00000474251 GAPVD1Q14C86 1478 aa32.58■■■□□ 2.81
PDE6B-208ENST00000474251 BIVM-ERCC5R4GMW8 1640 aa32.55■■■□□ 2.8
PDE6B-208ENST00000474251 CHMP7Q8WUX9 453 aaPredicted RBP32.52■■■□□ 2.8
PDE6B-208ENST00000474251 TOP2BQ02880 1626 aa32.48■■■□□ 2.79
PDE6B-208ENST00000474251 WRNQ14191 1432 aaPredicted RBP eCLIP32.39■■■□□ 2.78
PDE6B-208ENST00000474251 ADAMTS12P58397 1594 aa32.37■■■□□ 2.77
PDE6B-208ENST00000474251 GRIN2AQ12879 1464 aa32.29■■■□□ 2.76
PDE6B-208ENST00000474251 CEP170Q5SW79 1584 aa32.24■■■□□ 2.75
PDE6B-208ENST00000474251 ERICH3Q5RHP9 1530 aa32.2■■■□□ 2.74
PDE6B-208ENST00000474251 TRHP20396 242 aaPredicted RBP32.19■■■□□ 2.74
PDE6B-208ENST00000474251 NUP160Q12769 1436 aa32.18■■■□□ 2.74
PDE6B-208ENST00000474251 ERCC6L2Q5T890 1561 aa32.16■■■□□ 2.74
PDE6B-208ENST00000474251 FHAD1B1AJZ9 1412 aa32.16■■■□□ 2.74
PDE6B-208ENST00000474251 SHROOM2Q13796 1616 aa32.15■■■□□ 2.74
PDE6B-208ENST00000474251 RUSC2Q8N2Y8 1516 aa31.92■■■□□ 2.7
PDE6B-208ENST00000474251 CUL7Q14999 1698 aa31.81■■■□□ 2.68
PDE6B-208ENST00000474251 PRG4Q92954 1404 aaPredicted RBP31.81■■■□□ 2.68
PDE6B-208ENST00000474251 KIF13AQ9H1H9 1805 aa31.76■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms