RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 NISCHQ9Y2I1 1504 aa45.37■■■■■ 4.85
CCDC171-206ENST00000474193 CCDC180Q9P1Z9 1646 aa40.48■■■■■ 4.07
CCDC171-206ENST00000474193 ABCC9O60706 1549 aa40.03■■■■■ 4
CCDC171-206ENST00000474193 RB1CC1Q8TDY2 1594 aa38.36■■■■□ 3.73
CCDC171-206ENST00000474193 DCAF8L2P0C7V8 631 aa38.34■■■■□ 3.73
CCDC171-206ENST00000474193 NACADO15069 1562 aa38.22■■■■□ 3.71
CCDC171-206ENST00000474193 MYO15BQ96JP2 1530 aa37.82■■■■□ 3.65
CCDC171-206ENST00000474193 ZCCHC6Q5VYS8 1495 aaKnown RBP37.66■■■■□ 3.62
CCDC171-206ENST00000474193 DCAF1Q9Y4B6 1507 aa37.51■■■■□ 3.6
CCDC171-206ENST00000474193 PABPN1Q86U42 306 aaKnown RBP eCLIP37.39■■■■□ 3.58
CCDC171-206ENST00000474193 UNC13AQ9UPW8 1703 aa37.33■■■■□ 3.57
CCDC171-206ENST00000474193 BICRAQ9NZM4 1560 aa37.06■■■■□ 3.52
CCDC171-206ENST00000474193 DNAJC5BQ9UF47 199 aa37.03■■■■□ 3.52
CCDC171-206ENST00000474193 SCRIBQ14160 1630 aa36.91■■■■□ 3.5
CCDC171-206ENST00000474193 SHROOM4Q9ULL8 1493 aa36.76■■■■□ 3.48
CCDC171-206ENST00000474193 EIF4G1Q04637 1599 aaKnown RBP36.19■■■■□ 3.38
CCDC171-206ENST00000474193 CC2D2AQ9P2K1 1620 aa36.15■■■■□ 3.38
CCDC171-206ENST00000474193 CECR2Q9BXF3 1484 aa36.03■■■■□ 3.36
CCDC171-206ENST00000474193 SMARCA4P51532 1647 aa35.26■■■■□ 3.24
CCDC171-206ENST00000474193 NCAPD3P42695 1498 aa35.26■■■■□ 3.23
CCDC171-206ENST00000474193 BAZ1AQ9NRL2 1556 aaPredicted RBP35.23■■■■□ 3.23
CCDC171-206ENST00000474193 ATAD2BQ9ULI0 1458 aa35.2■■■■□ 3.23
CCDC171-206ENST00000474193 SMARCA2P51531 1590 aa35.19■■■■□ 3.22
CCDC171-206ENST00000474193 HMGXB3Q12766 1538 aa35.01■■■■□ 3.19
CCDC171-206ENST00000474193 BAZ1BQ9UIG0 1483 aaKnown RBP34.94■■■■□ 3.18
CCDC171-206ENST00000474193 MROH2BQ7Z745 1585 aa34.92■■■■□ 3.18
CCDC171-206ENST00000474193 PEG3Q9GZU2 1588 aa34.9■■■■□ 3.18
CCDC171-206ENST00000474193 ERCC6Q03468 1493 aa34.63■■■■□ 3.13
CCDC171-206ENST00000474193 WIZO95785 1651 aa34.53■■■■□ 3.12
CCDC171-206ENST00000474193 NESP48681 1621 aa34.46■■■■□ 3.11
CCDC171-206ENST00000474193 RSF1Q96T23 1441 aaPredicted RBP34.43■■■■□ 3.1
CCDC171-206ENST00000474193 LAMC3Q9Y6N6 1575 aa34.4■■■■□ 3.1
CCDC171-206ENST00000474193 CUX2O14529 1486 aa34.33■■■■□ 3.09
CCDC171-206ENST00000474193 PDS5BQ9NTI5 1447 aa34.27■■■■□ 3.08
CCDC171-206ENST00000474193 CADPSQ9ULU8 1353 aa34.25■■■■□ 3.07
CCDC171-206ENST00000474193 TOP2AP11388 1531 aaKnown RBP34.16■■■■□ 3.06
CCDC171-206ENST00000474193 KIF21AQ7Z4S6 1674 aa34.03■■■■□ 3.04
CCDC171-206ENST00000474193 THOC2Q8NI27 1593 aaKnown RBP33.97■■■■□ 3.03
CCDC171-206ENST00000474193 CFTRP13569 1480 aa33.91■■■■□ 3.02
CCDC171-206ENST00000474193 MRC2Q9UBG0 1479 aa33.85■■■■□ 3.01
CCDC171-206ENST00000474193 CEP164Q9UPV0 1460 aa33.84■■■■□ 3.01
CCDC171-206ENST00000474193 FANCD2Q9BXW9 1451 aa33.83■■■■□ 3.01
CCDC171-206ENST00000474193 CCDC88BA6NC98 1476 aa33.79■■■■□ 3
CCDC171-206ENST00000474193 DNAJC5Q9H3Z4 198 aa33.77■■■■□ 3
CCDC171-206ENST00000474193 WDR62O43379 1518 aa33.69■■■□□ 2.98
CCDC171-206ENST00000474193 PRDM2Q13029 1718 aa33.57■■■□□ 2.96
CCDC171-206ENST00000474193 SUPT5HO00267 1087 aaKnown RBP33.46■■■□□ 2.95
CCDC171-206ENST00000474193 URB2Q14146 1524 aaKnown RBP33.44■■■□□ 2.94
CCDC171-206ENST00000474193 ABCC8Q09428 1581 aa33.32■■■□□ 2.92
CCDC171-206ENST00000474193 TOPBP1Q92547 1522 aa33.22■■■□□ 2.91
CCDC171-206ENST00000474193 IFT140Q96RY7 1462 aa33.16■■■□□ 2.9
CCDC171-206ENST00000474193 DNMBPQ6XZF7 1577 aa33.15■■■□□ 2.9
CCDC171-206ENST00000474193 OSCARQ8IYS5 282 aa32.98■■■□□ 2.87
CCDC171-206ENST00000474193 ZNF608Q9ULD9 1512 aaPredicted RBP32.94■■■□□ 2.86
CCDC171-206ENST00000474193 POLA1P09884 1462 aaPredicted RBP32.9■■■□□ 2.86
CCDC171-206ENST00000474193 SOGA1O94964 1423 aa32.86■■■□□ 2.85
CCDC171-206ENST00000474193 TARBP1Q13395 1621 aaKnown RBP32.82■■■□□ 2.84
CCDC171-206ENST00000474193 EIF4G3O43432 1585 aaKnown RBP32.79■■■□□ 2.84
CCDC171-206ENST00000474193 AQRO60306 1485 aaKnown RBP eCLIP32.79■■■□□ 2.84
CCDC171-206ENST00000474193 CUX1P39880 1505 aa32.78■■■□□ 2.84
CCDC171-206ENST00000474193 FGD5Q6ZNL6 1462 aa32.78■■■□□ 2.84
CCDC171-206ENST00000474193 RAD54L2Q9Y4B4 1467 aa32.77■■■□□ 2.84
CCDC171-206ENST00000474193 TDRD9Q8NDG6 1382 aaKnown RBP32.7■■■□□ 2.82
CCDC171-206ENST00000474193 FBLN2P98095 1184 aa32.65■■■□□ 2.82
CCDC171-206ENST00000474193 WDR97A6NE52 1622 aa32.62■■■□□ 2.81
CCDC171-206ENST00000474193 TRIM41Q8WV44 630 aa32.57■■■□□ 2.8
CCDC171-206ENST00000474193 WRNQ14191 1432 aaPredicted RBP eCLIP32.54■■■□□ 2.8
CCDC171-206ENST00000474193 GRIN2BQ13224 1484 aa32.49■■■□□ 2.79
CCDC171-206ENST00000474193 CHMP7Q8WUX9 453 aaPredicted RBP32.48■■■□□ 2.79
CCDC171-206ENST00000474193 CHD1O14646 1710 aa32.46■■■□□ 2.79
CCDC171-206ENST00000474193 ABCA10Q8WWZ4 1543 aa32.45■■■□□ 2.78
CCDC171-206ENST00000474193 GAPVD1Q14C86 1478 aa32.44■■■□□ 2.78
CCDC171-206ENST00000474193 SNAPC4Q5SXM2 1469 aa32.44■■■□□ 2.78
CCDC171-206ENST00000474193 MAGI1Q96QZ7 1491 aaPredicted RBP32.43■■■□□ 2.78
CCDC171-206ENST00000474193 TOP2BQ02880 1626 aa32.43■■■□□ 2.78
CCDC171-206ENST00000474193 BIVM-ERCC5R4GMW8 1640 aa32.4■■■□□ 2.78
CCDC171-206ENST00000474193 SYNJ1O43426 1573 aa32.35■■■□□ 2.77
CCDC171-206ENST00000474193 PBRM1Q86U86 1689 aa32.31■■■□□ 2.76
CCDC171-206ENST00000474193 SYNJ2O15056 1496 aa32.3■■■□□ 2.76
CCDC171-206ENST00000474193 RIMBP3CA6NJZ7 1639 aa32.29■■■□□ 2.76
CCDC171-206ENST00000474193 RIMBP3BA6NNM3 1639 aa32.29■■■□□ 2.76
CCDC171-206ENST00000474193 RIMBP3Q9UFD9 1639 aa32.29■■■□□ 2.76
CCDC171-206ENST00000474193 ABCA5Q8WWZ7 1642 aa32.27■■■□□ 2.76
CCDC171-206ENST00000474193 ARHGEF11O15085 1522 aa32.26■■■□□ 2.76
CCDC171-206ENST00000474193 CYB5RLQ6IPT4 315 aa32.15■■■□□ 2.74
CCDC171-206ENST00000474193 ERICH3Q5RHP9 1530 aa32.07■■■□□ 2.72
CCDC171-206ENST00000474193 CLASP1Q7Z460 1538 aa32.07■■■□□ 2.72
CCDC171-206ENST00000474193 FHAD1B1AJZ9 1412 aa32.06■■■□□ 2.72
CCDC171-206ENST00000474193 GRIN2AQ12879 1464 aa32.03■■■□□ 2.72
CCDC171-206ENST00000474193 ADAMTS12P58397 1594 aa32.01■■■□□ 2.71
CCDC171-206ENST00000474193 ARAP1Q96P48 1450 aa31.94■■■□□ 2.7
CCDC171-206ENST00000474193 KIF27Q86VH2 1401 aa31.93■■■□□ 2.7
CCDC171-206ENST00000474193 NUP160Q12769 1436 aa31.87■■■□□ 2.69
CCDC171-206ENST00000474193 CEP170Q5SW79 1584 aa31.81■■■□□ 2.68
CCDC171-206ENST00000474193 IGF1RP08069 1367 aa31.8■■■□□ 2.68
CCDC171-206ENST00000474193 TRHP20396 242 aaPredicted RBP31.71■■■□□ 2.67
CCDC171-206ENST00000474193 JPH4Q96JJ6 628 aa31.71■■■□□ 2.67
CCDC171-206ENST00000474193 CUL7Q14999 1698 aa31.7■■■□□ 2.67
CCDC171-206ENST00000474193 CARMIL1Q5VZK9 1371 aa31.65■■■□□ 2.66
CCDC171-206ENST00000474193 SHROOM2Q13796 1616 aa31.63■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms