RNA–Protein interactions for RNA: ENST00000474172.1

SETX-204, Transcript of senataxin, humanhuman

TSL 3

Gene SETX, Length 719 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETX-204ENST00000474172 NISCHQ9Y2I1 1504 aa23.12■■□□□ 1.29
SETX-204ENST00000474172 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
SETX-204ENST00000474172 ZCCHC6Q5VYS8 1495 aaKnown RBP19.4■□□□□ 0.7
SETX-204ENST00000474172 ABCC9O60706 1549 aa19.19■□□□□ 0.66
SETX-204ENST00000474172 DCAF8L2P0C7V8 631 aa19.13■□□□□ 0.65
SETX-204ENST00000474172 DCAF1Q9Y4B6 1507 aa19.02■□□□□ 0.64
SETX-204ENST00000474172 SHROOM4Q9ULL8 1493 aa18.94■□□□□ 0.62
SETX-204ENST00000474172 MYO15BQ96JP2 1530 aa18.78■□□□□ 0.6
SETX-204ENST00000474172 NACADO15069 1562 aa18.72■□□□□ 0.59
SETX-204ENST00000474172 AEBP2Q6ZN18 517 aaPredicted RBP18.69■□□□□ 0.58
SETX-204ENST00000474172 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
SETX-204ENST00000474172 RB1CC1Q8TDY2 1594 aa18.57■□□□□ 0.56
SETX-204ENST00000474172 UNC13AQ9UPW8 1703 aa18.38■□□□□ 0.53
SETX-204ENST00000474172 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
SETX-204ENST00000474172 BICRAQ9NZM4 1560 aa18.19■□□□□ 0.5
SETX-204ENST00000474172 SUPT5HO00267 1087 aaKnown RBP18.14■□□□□ 0.49
SETX-204ENST00000474172 PABPN1Q86U42 306 aaKnown RBP eCLIP18.13■□□□□ 0.49
SETX-204ENST00000474172 CECR2Q9BXF3 1484 aa18.08■□□□□ 0.49
SETX-204ENST00000474172 RSF1Q96T23 1441 aaPredicted RBP17.95■□□□□ 0.46
SETX-204ENST00000474172 MROH2BQ7Z745 1585 aa17.94■□□□□ 0.46
SETX-204ENST00000474172 WIZO95785 1651 aa17.8■□□□□ 0.44
SETX-204ENST00000474172 SMARCA4P51532 1647 aa17.79■□□□□ 0.44
SETX-204ENST00000474172 BAZ1AQ9NRL2 1556 aaPredicted RBP17.77■□□□□ 0.44
SETX-204ENST00000474172 EIF4G1Q04637 1599 aaKnown RBP17.55■□□□□ 0.4
SETX-204ENST00000474172 PEG3Q9GZU2 1588 aa17.52■□□□□ 0.39
SETX-204ENST00000474172 ATAD2BQ9ULI0 1458 aa17.51■□□□□ 0.39
SETX-204ENST00000474172 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
SETX-204ENST00000474172 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
SETX-204ENST00000474172 CCDC88BA6NC98 1476 aa17.39■□□□□ 0.37
SETX-204ENST00000474172 BAZ1BQ9UIG0 1483 aaKnown RBP17.35■□□□□ 0.37
SETX-204ENST00000474172 CC2D2AQ9P2K1 1620 aa17.33■□□□□ 0.37
SETX-204ENST00000474172 NCAPD3P42695 1498 aa17.32■□□□□ 0.36
SETX-204ENST00000474172 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
SETX-204ENST00000474172 DNAJC5BQ9UF47 199 aa17.15■□□□□ 0.34
SETX-204ENST00000474172 ABCC8Q09428 1581 aa17.05■□□□□ 0.32
SETX-204ENST00000474172 TRIM41Q8WV44 630 aa16.97■□□□□ 0.31
SETX-204ENST00000474172 CFTRP13569 1480 aa16.93■□□□□ 0.3
SETX-204ENST00000474172 NESP48681 1621 aa16.88■□□□□ 0.29
SETX-204ENST00000474172 CADPSQ9ULU8 1353 aa16.88■□□□□ 0.29
SETX-204ENST00000474172 SYNJ1O43426 1573 aa16.85■□□□□ 0.29
SETX-204ENST00000474172 PRDM2Q13029 1718 aa16.84■□□□□ 0.29
SETX-204ENST00000474172 WRNQ14191 1432 aaPredicted RBP eCLIP16.82■□□□□ 0.28
SETX-204ENST00000474172 LOC105371045A0A1W2PR82 267 aa16.78■□□□□ 0.28
SETX-204ENST00000474172 FAM9AQ8IZU1 332 aaPredicted RBP16.78■□□□□ 0.28
SETX-204ENST00000474172 CUX1P39880 1505 aa16.75■□□□□ 0.27
SETX-204ENST00000474172 RUSC2Q8N2Y8 1516 aa16.73■□□□□ 0.27
SETX-204ENST00000474172 SOGA1O94964 1423 aa16.72■□□□□ 0.27
SETX-204ENST00000474172 TOP2BQ02880 1626 aa16.71■□□□□ 0.27
SETX-204ENST00000474172 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
SETX-204ENST00000474172 FANCD2Q9BXW9 1451 aa16.71■□□□□ 0.27
SETX-204ENST00000474172 LAMC3Q9Y6N6 1575 aa16.7■□□□□ 0.26
SETX-204ENST00000474172 KIF21AQ7Z4S6 1674 aa16.63■□□□□ 0.25
SETX-204ENST00000474172 EHMT2Q96KQ7 1210 aa16.61■□□□□ 0.25
SETX-204ENST00000474172 URB2Q14146 1524 aaKnown RBP16.57■□□□□ 0.24
SETX-204ENST00000474172 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
SETX-204ENST00000474172 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
SETX-204ENST00000474172 PDS5BQ9NTI5 1447 aa16.54■□□□□ 0.24
SETX-204ENST00000474172 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
SETX-204ENST00000474172 DNMBPQ6XZF7 1577 aa16.53■□□□□ 0.24
SETX-204ENST00000474172 CSRNP3Q8WYN3 585 aa16.49■□□□□ 0.23
SETX-204ENST00000474172 RAD54L2Q9Y4B4 1467 aa16.48■□□□□ 0.23
SETX-204ENST00000474172 POLA1P09884 1462 aaPredicted RBP16.46■□□□□ 0.23
SETX-204ENST00000474172 EEA1Q15075 1411 aa16.45■□□□□ 0.22
SETX-204ENST00000474172 CUX2O14529 1486 aa16.41■□□□□ 0.22
SETX-204ENST00000474172 MRC2Q9UBG0 1479 aa16.4■□□□□ 0.22
SETX-204ENST00000474172 WDR97A6NE52 1622 aa16.36■□□□□ 0.21
SETX-204ENST00000474172 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
SETX-204ENST00000474172 RAPGEF2Q9Y4G8 1499 aa16.35■□□□□ 0.21
SETX-204ENST00000474172 ABCA10Q8WWZ4 1543 aa16.35■□□□□ 0.21
SETX-204ENST00000474172 THOC2Q8NI27 1593 aaKnown RBP16.34■□□□□ 0.21
SETX-204ENST00000474172 KIF21BO75037 1637 aa16.34■□□□□ 0.21
SETX-204ENST00000474172 IGF1RP08069 1367 aa16.33■□□□□ 0.2
SETX-204ENST00000474172 ERCC6Q03468 1493 aa16.33■□□□□ 0.2
SETX-204ENST00000474172 WDR62O43379 1518 aa16.33■□□□□ 0.2
SETX-204ENST00000474172 TARBP1Q13395 1621 aaKnown RBP16.33■□□□□ 0.2
SETX-204ENST00000474172 PRXQ9BXM0 1461 aa16.32■□□□□ 0.2
SETX-204ENST00000474172 GOLGA3Q08378 1498 aa16.29■□□□□ 0.2
SETX-204ENST00000474172 TDRD9Q8NDG6 1382 aaKnown RBP16.29■□□□□ 0.2
SETX-204ENST00000474172 TNIKQ9UKE5 1360 aa16.27■□□□□ 0.2
SETX-204ENST00000474172 ABCA5Q8WWZ7 1642 aa16.26■□□□□ 0.19
SETX-204ENST00000474172 UBTFP17480 764 aaKnown RBP16.25■□□□□ 0.19
SETX-204ENST00000474172 ZNF608Q9ULD9 1512 aaPredicted RBP16.22■□□□□ 0.19
SETX-204ENST00000474172 ERICH3Q5RHP9 1530 aa16.2■□□□□ 0.18
SETX-204ENST00000474172 CARMIL1Q5VZK9 1371 aa16.2■□□□□ 0.18
SETX-204ENST00000474172 AQRO60306 1485 aaKnown RBP eCLIP16.2■□□□□ 0.182e-6■■■□□ 18.3
SETX-204ENST00000474172 CEP162Q5TB80 1403 aa16.19■□□□□ 0.18
SETX-204ENST00000474172 GAPVD1Q14C86 1478 aa16.19■□□□□ 0.18
SETX-204ENST00000474172 PHF23Q9BUL5 403 aaPredicted RBP16.18■□□□□ 0.18
SETX-204ENST00000474172 IFT140Q96RY7 1462 aa16.16■□□□□ 0.18
SETX-204ENST00000474172 PBRM1Q86U86 1689 aa16.14■□□□□ 0.17
SETX-204ENST00000474172 RANGAP1P46060 587 aaPredicted RBP16.12■□□□□ 0.17
SETX-204ENST00000474172 CUL7Q14999 1698 aa16.09■□□□□ 0.17
SETX-204ENST00000474172 EIF4G3O43432 1585 aaKnown RBP16.09■□□□□ 0.17
SETX-204ENST00000474172 CLIP1P30622 1438 aa16.06■□□□□ 0.16
SETX-204ENST00000474172 GRIN2BQ13224 1484 aa16.04■□□□□ 0.16
SETX-204ENST00000474172 ADAMTS12P58397 1594 aa16.04■□□□□ 0.16
SETX-204ENST00000474172 PPARGC1BQ86YN6 1023 aaKnown RBP16.02■□□□□ 0.16
SETX-204ENST00000474172 SNAPC4Q5SXM2 1469 aa16.01■□□□□ 0.15
SETX-204ENST00000474172 ARAP1Q96P48 1450 aa16.01■□□□□ 0.15
SETX-204ENST00000474172 FHAD1B1AJZ9 1412 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms