RNA–Protein interactions for RNA: ENST00000474165.5

NXPE3-202, Transcript of neurexophilin and PC-esterase domain family member 3, humanhuman

TSL 5

Gene NXPE3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXPE3-202ENST00000474165 NISCHQ9Y2I1 1504 aa49.5■■■■■ 5.51
NXPE3-202ENST00000474165 ABCC9O60706 1549 aa44.53■■■■■ 4.72
NXPE3-202ENST00000474165 CCDC180Q9P1Z9 1646 aa44.34■■■■■ 4.69
NXPE3-202ENST00000474165 RB1CC1Q8TDY2 1594 aa42.23■■■■■ 4.35
NXPE3-202ENST00000474165 DCAF8L2P0C7V8 631 aa41.93■■■■■ 4.3
NXPE3-202ENST00000474165 NACADO15069 1562 aa41.92■■■■■ 4.3
NXPE3-202ENST00000474165 DNAJC5BQ9UF47 199 aa41.86■■■■■ 4.29
NXPE3-202ENST00000474165 PABPN1Q86U42 306 aaKnown RBP eCLIP41.52■■■■■ 4.24
NXPE3-202ENST00000474165 UNC13AQ9UPW8 1703 aa41.42■■■■■ 4.22
NXPE3-202ENST00000474165 MYO15BQ96JP2 1530 aa41.27■■■■■ 4.2
NXPE3-202ENST00000474165 BICRAQ9NZM4 1560 aa41.11■■■■■ 4.17
NXPE3-202ENST00000474165 ZCCHC6Q5VYS8 1495 aaKnown RBP41.01■■■■■ 4.16
NXPE3-202ENST00000474165 DCAF1Q9Y4B6 1507 aa40.77■■■■■ 4.12
NXPE3-202ENST00000474165 SCRIBQ14160 1630 aa40.57■■■■■ 4.09
NXPE3-202ENST00000474165 SHROOM4Q9ULL8 1493 aa40.32■■■■■ 4.04
NXPE3-202ENST00000474165 CC2D2AQ9P2K1 1620 aa40.18■■■■■ 4.02
NXPE3-202ENST00000474165 EIF4G1Q04637 1599 aaKnown RBP40.06■■■■■ 4
NXPE3-202ENST00000474165 CECR2Q9BXF3 1484 aa40.06■■■■■ 4
NXPE3-202ENST00000474165 NCAPD3P42695 1498 aa38.73■■■■□ 3.79
NXPE3-202ENST00000474165 ATAD2BQ9ULI0 1458 aa38.66■■■■□ 3.78
NXPE3-202ENST00000474165 SMARCA4P51532 1647 aa38.63■■■■□ 3.77
NXPE3-202ENST00000474165 SMARCA2P51531 1590 aa38.48■■■■□ 3.75
NXPE3-202ENST00000474165 HMGXB3Q12766 1538 aa38.42■■■■□ 3.74
NXPE3-202ENST00000474165 ERCC6Q03468 1493 aa38.38■■■■□ 3.73
NXPE3-202ENST00000474165 BAZ1AQ9NRL2 1556 aaPredicted RBP38.38■■■■□ 3.73
NXPE3-202ENST00000474165 DNAJC5Q9H3Z4 198 aa38.29■■■■□ 3.72
NXPE3-202ENST00000474165 NESP48681 1621 aa38.29■■■■□ 3.72
NXPE3-202ENST00000474165 BAZ1BQ9UIG0 1483 aaKnown RBP38.28■■■■□ 3.72
NXPE3-202ENST00000474165 MROH2BQ7Z745 1585 aa38.22■■■■□ 3.71
NXPE3-202ENST00000474165 CUX2O14529 1486 aa38.22■■■■□ 3.71
NXPE3-202ENST00000474165 PEG3Q9GZU2 1588 aa38.18■■■■□ 3.7
NXPE3-202ENST00000474165 LAMC3Q9Y6N6 1575 aa37.84■■■■□ 3.65
NXPE3-202ENST00000474165 THOC2Q8NI27 1593 aaKnown RBP37.8■■■■□ 3.64
NXPE3-202ENST00000474165 WIZO95785 1651 aa37.78■■■■□ 3.64
NXPE3-202ENST00000474165 KIF21AQ7Z4S6 1674 aa37.75■■■■□ 3.63
NXPE3-202ENST00000474165 PDS5BQ9NTI5 1447 aa37.62■■■■□ 3.61
NXPE3-202ENST00000474165 CADPSQ9ULU8 1353 aa37.58■■■■□ 3.61
NXPE3-202ENST00000474165 RSF1Q96T23 1441 aaPredicted RBP37.39■■■■□ 3.58
NXPE3-202ENST00000474165 MRC2Q9UBG0 1479 aa37.34■■■■□ 3.57
NXPE3-202ENST00000474165 WDR62O43379 1518 aa37.25■■■■□ 3.55
NXPE3-202ENST00000474165 TOP2AP11388 1531 aaKnown RBP37.2■■■■□ 3.55
NXPE3-202ENST00000474165 CEP164Q9UPV0 1460 aa37.19■■■■□ 3.54
NXPE3-202ENST00000474165 FANCD2Q9BXW9 1451 aa37.18■■■■□ 3.54
NXPE3-202ENST00000474165 CFTRP13569 1480 aa37.14■■■■□ 3.54
NXPE3-202ENST00000474165 URB2Q14146 1524 aaKnown RBP36.92■■■■□ 3.5
NXPE3-202ENST00000474165 CCDC88BA6NC98 1476 aa36.84■■■■□ 3.49
NXPE3-202ENST00000474165 PRDM2Q13029 1718 aa36.76■■■■□ 3.48
NXPE3-202ENST00000474165 TRIM41Q8WV44 630 aa36.73■■■■□ 3.47
NXPE3-202ENST00000474165 OSCARQ8IYS5 282 aa36.54■■■■□ 3.44
NXPE3-202ENST00000474165 ZNF608Q9ULD9 1512 aaPredicted RBP36.51■■■■□ 3.44
NXPE3-202ENST00000474165 TOPBP1Q92547 1522 aa36.49■■■■□ 3.43
NXPE3-202ENST00000474165 IFT140Q96RY7 1462 aa36.43■■■■□ 3.42
NXPE3-202ENST00000474165 DNMBPQ6XZF7 1577 aa36.32■■■■□ 3.4
NXPE3-202ENST00000474165 ABCC8Q09428 1581 aa36.27■■■■□ 3.4
NXPE3-202ENST00000474165 EIF4G3O43432 1585 aaKnown RBP36.24■■■■□ 3.39
NXPE3-202ENST00000474165 AQRO60306 1485 aaKnown RBP eCLIP36.17■■■■□ 3.38
NXPE3-202ENST00000474165 TARBP1Q13395 1621 aaKnown RBP36.16■■■■□ 3.38
NXPE3-202ENST00000474165 RIMBP3CA6NJZ7 1639 aa36.12■■■■□ 3.37
NXPE3-202ENST00000474165 RIMBP3BA6NNM3 1639 aa36.12■■■■□ 3.37
NXPE3-202ENST00000474165 RIMBP3Q9UFD9 1639 aa36.12■■■■□ 3.37
NXPE3-202ENST00000474165 POLA1P09884 1462 aaPredicted RBP36.12■■■■□ 3.37
NXPE3-202ENST00000474165 RAD54L2Q9Y4B4 1467 aa36.06■■■■□ 3.36
NXPE3-202ENST00000474165 CHD1O14646 1710 aa36.01■■■■□ 3.36
NXPE3-202ENST00000474165 ARHGEF11O15085 1522 aa35.98■■■■□ 3.35
NXPE3-202ENST00000474165 SOGA1O94964 1423 aa35.94■■■■□ 3.34
NXPE3-202ENST00000474165 TDRD9Q8NDG6 1382 aaKnown RBP35.94■■■■□ 3.34
NXPE3-202ENST00000474165 FBLN2P98095 1184 aa35.94■■■■□ 3.34
NXPE3-202ENST00000474165 FGD5Q6ZNL6 1462 aa35.91■■■■□ 3.34
NXPE3-202ENST00000474165 CUX1P39880 1505 aa35.89■■■■□ 3.34
NXPE3-202ENST00000474165 SUPT5HO00267 1087 aaKnown RBP35.85■■■■□ 3.33
NXPE3-202ENST00000474165 CYB5RLQ6IPT4 315 aa35.77■■■■□ 3.32
NXPE3-202ENST00000474165 SNAPC4Q5SXM2 1469 aa35.76■■■■□ 3.32
NXPE3-202ENST00000474165 ARAP1Q96P48 1450 aa35.66■■■■□ 3.3
NXPE3-202ENST00000474165 WDR97A6NE52 1622 aa35.64■■■■□ 3.3
NXPE3-202ENST00000474165 CHMP7Q8WUX9 453 aaPredicted RBP35.6■■■■□ 3.29
NXPE3-202ENST00000474165 GRIN2BQ13224 1484 aa35.6■■■■□ 3.29
NXPE3-202ENST00000474165 MAGI1Q96QZ7 1491 aaPredicted RBP35.57■■■■□ 3.28
NXPE3-202ENST00000474165 CLASP1Q7Z460 1538 aa35.53■■■■□ 3.28
NXPE3-202ENST00000474165 PBRM1Q86U86 1689 aa35.51■■■■□ 3.28
NXPE3-202ENST00000474165 GAPVD1Q14C86 1478 aa35.49■■■■□ 3.27
NXPE3-202ENST00000474165 SYNJ2O15056 1496 aa35.48■■■■□ 3.27
NXPE3-202ENST00000474165 SYNJ1O43426 1573 aa35.47■■■■□ 3.27
NXPE3-202ENST00000474165 ABCA10Q8WWZ4 1543 aa35.44■■■■□ 3.26
NXPE3-202ENST00000474165 ABCA5Q8WWZ7 1642 aa35.42■■■■□ 3.26
NXPE3-202ENST00000474165 TRHP20396 242 aaPredicted RBP35.37■■■■□ 3.25
NXPE3-202ENST00000474165 WRNQ14191 1432 aaPredicted RBP eCLIP35.28■■■■□ 3.24
NXPE3-202ENST00000474165 TOP2BQ02880 1626 aa35.25■■■■□ 3.23
NXPE3-202ENST00000474165 BIVM-ERCC5R4GMW8 1640 aa35.25■■■■□ 3.23
NXPE3-202ENST00000474165 ADAMTS12P58397 1594 aa35.16■■■■□ 3.22
NXPE3-202ENST00000474165 GRIN2AQ12879 1464 aa35.16■■■■□ 3.22
NXPE3-202ENST00000474165 ERCC6L2Q5T890 1561 aa35.11■■■■□ 3.21
NXPE3-202ENST00000474165 CEP170Q5SW79 1584 aa35.09■■■■□ 3.21
NXPE3-202ENST00000474165 NUP160Q12769 1436 aa35.03■■■■□ 3.2
NXPE3-202ENST00000474165 FHAD1B1AJZ9 1412 aa35.02■■■■□ 3.2
NXPE3-202ENST00000474165 ERICH3Q5RHP9 1530 aa34.96■■■■□ 3.19
NXPE3-202ENST00000474165 SHROOM2Q13796 1616 aa34.88■■■■□ 3.17
NXPE3-202ENST00000474165 PRG4Q92954 1404 aaPredicted RBP34.74■■■■□ 3.15
NXPE3-202ENST00000474165 JPH4Q96JJ6 628 aa34.7■■■■□ 3.15
NXPE3-202ENST00000474165 RUSC2Q8N2Y8 1516 aa34.66■■■■□ 3.14
NXPE3-202ENST00000474165 IGF1RP08069 1367 aa34.6■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms