RNA–Protein interactions for RNA: ENST00000474049.1

CYTH2-208, Transcript of cytohesin 2, humanhuman

TSL 2

Gene CYTH2, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH2-208ENST00000474049 NISCHQ9Y2I1 1504 aa33.76■■■■□ 3
CYTH2-208ENST00000474049 ABCC9O60706 1549 aa31.02■■■□□ 2.56
CYTH2-208ENST00000474049 CCDC180Q9P1Z9 1646 aa30.47■■■□□ 2.47
CYTH2-208ENST00000474049 DNAJC5BQ9UF47 199 aa29.44■■■□□ 2.3
CYTH2-208ENST00000474049 RB1CC1Q8TDY2 1594 aa29.26■■■□□ 2.28
CYTH2-208ENST00000474049 NACADO15069 1562 aa28.92■■■□□ 2.22
CYTH2-208ENST00000474049 DCAF8L2P0C7V8 631 aa28.83■■■□□ 2.21
CYTH2-208ENST00000474049 PABPN1Q86U42 306 aaKnown RBP eCLIP28.82■■■□□ 2.2
CYTH2-208ENST00000474049 UNC13AQ9UPW8 1703 aa28.57■■■□□ 2.16
CYTH2-208ENST00000474049 BICRAQ9NZM4 1560 aa28.4■■■□□ 2.14
CYTH2-208ENST00000474049 MYO15BQ96JP2 1530 aa28.31■■■□□ 2.12
CYTH2-208ENST00000474049 CECR2Q9BXF3 1484 aa27.96■■■□□ 2.07
CYTH2-208ENST00000474049 CC2D2AQ9P2K1 1620 aa27.95■■■□□ 2.06
CYTH2-208ENST00000474049 SHROOM4Q9ULL8 1493 aa27.93■■■□□ 2.06
CYTH2-208ENST00000474049 ZCCHC6Q5VYS8 1495 aaKnown RBP27.89■■■□□ 2.05
CYTH2-208ENST00000474049 SCRIBQ14160 1630 aa27.84■■■□□ 2.05
CYTH2-208ENST00000474049 DCAF1Q9Y4B6 1507 aa27.8■■■□□ 2.04
CYTH2-208ENST00000474049 EIF4G1Q04637 1599 aaKnown RBP27.77■■■□□ 2.04
CYTH2-208ENST00000474049 DNAJC5Q9H3Z4 198 aa27.34■■□□□ 1.97
CYTH2-208ENST00000474049 CUX2O14529 1486 aa26.85■■□□□ 1.89
CYTH2-208ENST00000474049 ERCC6Q03468 1493 aa26.83■■□□□ 1.89
CYTH2-208ENST00000474049 NCAPD3P42695 1498 aa26.69■■□□□ 1.86
CYTH2-208ENST00000474049 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.85
CYTH2-208ENST00000474049 NESP48681 1621 aa26.5■■□□□ 1.83
CYTH2-208ENST00000474049 SMARCA2P51531 1590 aa26.48■■□□□ 1.83
CYTH2-208ENST00000474049 HMGXB3Q12766 1538 aa26.47■■□□□ 1.83
CYTH2-208ENST00000474049 SMARCA4P51532 1647 aa26.45■■□□□ 1.82
CYTH2-208ENST00000474049 BAZ1BQ9UIG0 1483 aaKnown RBP26.34■■□□□ 1.81
CYTH2-208ENST00000474049 THOC2Q8NI27 1593 aaKnown RBP26.29■■□□□ 1.8
CYTH2-208ENST00000474049 BAZ1AQ9NRL2 1556 aaPredicted RBP26.24■■□□□ 1.79
CYTH2-208ENST00000474049 LAMC3Q9Y6N6 1575 aa26.2■■□□□ 1.78
CYTH2-208ENST00000474049 PEG3Q9GZU2 1588 aa26.13■■□□□ 1.77
CYTH2-208ENST00000474049 KIF21AQ7Z4S6 1674 aa26.12■■□□□ 1.77
CYTH2-208ENST00000474049 TRIM41Q8WV44 630 aa26.09■■□□□ 1.77
CYTH2-208ENST00000474049 PDS5BQ9NTI5 1447 aa26.08■■□□□ 1.77
CYTH2-208ENST00000474049 MROH2BQ7Z745 1585 aa26.03■■□□□ 1.76
CYTH2-208ENST00000474049 CADPSQ9ULU8 1353 aa25.89■■□□□ 1.74
CYTH2-208ENST00000474049 MRC2Q9UBG0 1479 aa25.89■■□□□ 1.73
CYTH2-208ENST00000474049 WDR62O43379 1518 aa25.82■■□□□ 1.72
CYTH2-208ENST00000474049 WIZO95785 1651 aa25.71■■□□□ 1.71
CYTH2-208ENST00000474049 CEP164Q9UPV0 1460 aa25.71■■□□□ 1.71
CYTH2-208ENST00000474049 FANCD2Q9BXW9 1451 aa25.64■■□□□ 1.69
CYTH2-208ENST00000474049 OSCARQ8IYS5 282 aa25.57■■□□□ 1.68
CYTH2-208ENST00000474049 CFTRP13569 1480 aa25.49■■□□□ 1.67
CYTH2-208ENST00000474049 URB2Q14146 1524 aaKnown RBP25.44■■□□□ 1.66
CYTH2-208ENST00000474049 TOP2AP11388 1531 aaKnown RBP25.34■■□□□ 1.65
CYTH2-208ENST00000474049 RSF1Q96T23 1441 aaPredicted RBP25.32■■□□□ 1.64
CYTH2-208ENST00000474049 RIMBP3CA6NJZ7 1639 aa25.3■■□□□ 1.64
CYTH2-208ENST00000474049 RIMBP3BA6NNM3 1639 aa25.3■■□□□ 1.64
CYTH2-208ENST00000474049 RIMBP3Q9UFD9 1639 aa25.3■■□□□ 1.64
CYTH2-208ENST00000474049 ZNF608Q9ULD9 1512 aaPredicted RBP25.22■■□□□ 1.63
CYTH2-208ENST00000474049 IFT140Q96RY7 1462 aa25.19■■□□□ 1.62
CYTH2-208ENST00000474049 PRDM2Q13029 1718 aa25.18■■□□□ 1.62
CYTH2-208ENST00000474049 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
CYTH2-208ENST00000474049 TOPBP1Q92547 1522 aa25.08■■□□□ 1.61
CYTH2-208ENST00000474049 CCDC88BA6NC98 1476 aa25.06■■□□□ 1.6
CYTH2-208ENST00000474049 EIF4G3O43432 1585 aaKnown RBP25.05■■□□□ 1.6
CYTH2-208ENST00000474049 CYB5RLQ6IPT4 315 aa25.05■■□□□ 1.6
CYTH2-208ENST00000474049 TRHP20396 242 aaPredicted RBP24.97■■□□□ 1.59
CYTH2-208ENST00000474049 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
CYTH2-208ENST00000474049 DNMBPQ6XZF7 1577 aa24.95■■□□□ 1.58
CYTH2-208ENST00000474049 CHD1O14646 1710 aa24.95■■□□□ 1.58
CYTH2-208ENST00000474049 FBLN2P98095 1184 aa24.94■■□□□ 1.58
CYTH2-208ENST00000474049 AQRO60306 1485 aaKnown RBP eCLIP24.94■■□□□ 1.582e-6■■■■■ 36.7
CYTH2-208ENST00000474049 ARAP1Q96P48 1450 aa24.89■■□□□ 1.58
CYTH2-208ENST00000474049 TARBP1Q13395 1621 aaKnown RBP24.87■■□□□ 1.57
CYTH2-208ENST00000474049 POLA1P09884 1462 aaPredicted RBP24.8■■□□□ 1.56
CYTH2-208ENST00000474049 RAD54L2Q9Y4B4 1467 aa24.75■■□□□ 1.55
CYTH2-208ENST00000474049 TDRD9Q8NDG6 1382 aaKnown RBP24.72■■□□□ 1.55
CYTH2-208ENST00000474049 SOGA1O94964 1423 aa24.69■■□□□ 1.54
CYTH2-208ENST00000474049 SNAPC4Q5SXM2 1469 aa24.68■■□□□ 1.54
CYTH2-208ENST00000474049 CHMP7Q8WUX9 453 aaPredicted RBP24.63■■□□□ 1.53
CYTH2-208ENST00000474049 CLASP1Q7Z460 1538 aa24.62■■□□□ 1.53
CYTH2-208ENST00000474049 FGD5Q6ZNL6 1462 aa24.6■■□□□ 1.53
CYTH2-208ENST00000474049 SYNJ1O43426 1573 aa24.59■■□□□ 1.53
CYTH2-208ENST00000474049 AEBP2Q6ZN18 517 aaPredicted RBP24.57■■□□□ 1.52
CYTH2-208ENST00000474049 WDR97A6NE52 1622 aa24.56■■□□□ 1.52
CYTH2-208ENST00000474049 MAGI1Q96QZ7 1491 aaPredicted RBP24.55■■□□□ 1.52
CYTH2-208ENST00000474049 GRIN2BQ13224 1484 aa24.51■■□□□ 1.51
CYTH2-208ENST00000474049 CUX1P39880 1505 aa24.5■■□□□ 1.51
CYTH2-208ENST00000474049 SYNJ2O15056 1496 aa24.49■■□□□ 1.51
CYTH2-208ENST00000474049 GAPVD1Q14C86 1478 aa24.42■■□□□ 1.5
CYTH2-208ENST00000474049 PBRM1Q86U86 1689 aa24.4■■□□□ 1.5
CYTH2-208ENST00000474049 ABCA5Q8WWZ7 1642 aa24.27■■□□□ 1.48
CYTH2-208ENST00000474049 ABCA10Q8WWZ4 1543 aa24.25■■□□□ 1.47
CYTH2-208ENST00000474049 ERCC6L2Q5T890 1561 aa24.25■■□□□ 1.47
CYTH2-208ENST00000474049 GRIN2AQ12879 1464 aa24.2■■□□□ 1.47
CYTH2-208ENST00000474049 CEP170Q5SW79 1584 aa24.16■■□□□ 1.46
CYTH2-208ENST00000474049 ADAMTS12P58397 1594 aa24.14■■□□□ 1.45
CYTH2-208ENST00000474049 NUP160Q12769 1436 aa24.11■■□□□ 1.45
CYTH2-208ENST00000474049 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
CYTH2-208ENST00000474049 SHROOM2Q13796 1616 aa24.05■■□□□ 1.44
CYTH2-208ENST00000474049 FHAD1B1AJZ9 1412 aa24.04■■□□□ 1.44
CYTH2-208ENST00000474049 KIF13AQ9H1H9 1805 aa23.98■■□□□ 1.43
CYTH2-208ENST00000474049 SUPT5HO00267 1087 aaKnown RBP23.97■■□□□ 1.43
CYTH2-208ENST00000474049 PRG4Q92954 1404 aaPredicted RBP23.97■■□□□ 1.43
CYTH2-208ENST00000474049 TOP2BQ02880 1626 aa23.95■■□□□ 1.43
CYTH2-208ENST00000474049 BIVM-ERCC5R4GMW8 1640 aa23.95■■□□□ 1.43
CYTH2-208ENST00000474049 ERICH3Q5RHP9 1530 aa23.94■■□□□ 1.42
CYTH2-208ENST00000474049 JPH4Q96JJ6 628 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms