RNA–Protein interactions for RNA: ENST00000474000.5

COL16A1-210, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-210ENST00000474000 NISCHQ9Y2I1 1504 aa29.94■■■□□ 2.38
COL16A1-210ENST00000474000 ABCC9O60706 1549 aa27.16■■□□□ 1.94
COL16A1-210ENST00000474000 CCDC180Q9P1Z9 1646 aa26.8■■□□□ 1.88
COL16A1-210ENST00000474000 DNAJC5BQ9UF47 199 aa25.78■■□□□ 1.72
COL16A1-210ENST00000474000 RB1CC1Q8TDY2 1594 aa25.68■■□□□ 1.7
COL16A1-210ENST00000474000 NACADO15069 1562 aa25.45■■□□□ 1.66
COL16A1-210ENST00000474000 DCAF8L2P0C7V8 631 aa25.45■■□□□ 1.66
COL16A1-210ENST00000474000 PABPN1Q86U42 306 aaKnown RBP eCLIP25.33■■□□□ 1.65
COL16A1-210ENST00000474000 UNC13AQ9UPW8 1703 aa25.08■■□□□ 1.61
COL16A1-210ENST00000474000 MYO15BQ96JP2 1530 aa25.02■■□□□ 1.6
COL16A1-210ENST00000474000 BICRAQ9NZM4 1560 aa24.98■■□□□ 1.59
COL16A1-210ENST00000474000 ZCCHC6Q5VYS8 1495 aaKnown RBP24.78■■□□□ 1.56
COL16A1-210ENST00000474000 DCAF1Q9Y4B6 1507 aa24.7■■□□□ 1.54
COL16A1-210ENST00000474000 SHROOM4Q9ULL8 1493 aa24.53■■□□□ 1.52
COL16A1-210ENST00000474000 SCRIBQ14160 1630 aa24.49■■□□□ 1.51
COL16A1-210ENST00000474000 CC2D2AQ9P2K1 1620 aa24.49■■□□□ 1.51
COL16A1-210ENST00000474000 CECR2Q9BXF3 1484 aa24.48■■□□□ 1.51
COL16A1-210ENST00000474000 EIF4G1Q04637 1599 aaKnown RBP24.37■■□□□ 1.49
COL16A1-210ENST00000474000 DNAJC5Q9H3Z4 198 aa23.79■■□□□ 1.4
COL16A1-210ENST00000474000 NCAPD3P42695 1498 aa23.55■■□□□ 1.36
COL16A1-210ENST00000474000 ATAD2BQ9ULI0 1458 aa23.45■■□□□ 1.34
COL16A1-210ENST00000474000 CUX2O14529 1486 aa23.44■■□□□ 1.34
COL16A1-210ENST00000474000 ERCC6Q03468 1493 aa23.43■■□□□ 1.34
COL16A1-210ENST00000474000 SMARCA4P51532 1647 aa23.32■■□□□ 1.32
COL16A1-210ENST00000474000 SMARCA2P51531 1590 aa23.31■■□□□ 1.32
COL16A1-210ENST00000474000 HMGXB3Q12766 1538 aa23.28■■□□□ 1.32
COL16A1-210ENST00000474000 NESP48681 1621 aa23.28■■□□□ 1.32
COL16A1-210ENST00000474000 BAZ1AQ9NRL2 1556 aaPredicted RBP23.21■■□□□ 1.31
COL16A1-210ENST00000474000 BAZ1BQ9UIG0 1483 aaKnown RBP23.18■■□□□ 1.3
COL16A1-210ENST00000474000 PEG3Q9GZU2 1588 aa23.08■■□□□ 1.29
COL16A1-210ENST00000474000 MROH2BQ7Z745 1585 aa23.07■■□□□ 1.28
COL16A1-210ENST00000474000 THOC2Q8NI27 1593 aaKnown RBP23.01■■□□□ 1.27
COL16A1-210ENST00000474000 LAMC3Q9Y6N6 1575 aa23.01■■□□□ 1.27
COL16A1-210ENST00000474000 PDS5BQ9NTI5 1447 aa22.92■■□□□ 1.26
COL16A1-210ENST00000474000 KIF21AQ7Z4S6 1674 aa22.9■■□□□ 1.26
COL16A1-210ENST00000474000 CADPSQ9ULU8 1353 aa22.85■■□□□ 1.25
COL16A1-210ENST00000474000 WIZO95785 1651 aa22.74■■□□□ 1.23
COL16A1-210ENST00000474000 MRC2Q9UBG0 1479 aa22.72■■□□□ 1.23
COL16A1-210ENST00000474000 TRIM41Q8WV44 630 aa22.68■■□□□ 1.22
COL16A1-210ENST00000474000 RSF1Q96T23 1441 aaPredicted RBP22.65■■□□□ 1.22
COL16A1-210ENST00000474000 WDR62O43379 1518 aa22.65■■□□□ 1.22
COL16A1-210ENST00000474000 CEP164Q9UPV0 1460 aa22.58■■□□□ 1.2
COL16A1-210ENST00000474000 FANCD2Q9BXW9 1451 aa22.56■■□□□ 1.2
COL16A1-210ENST00000474000 CFTRP13569 1480 aa22.51■■□□□ 1.19
COL16A1-210ENST00000474000 TOP2AP11388 1531 aaKnown RBP22.47■■□□□ 1.19
COL16A1-210ENST00000474000 OSCARQ8IYS5 282 aa22.43■■□□□ 1.18
COL16A1-210ENST00000474000 URB2Q14146 1524 aaKnown RBP22.39■■□□□ 1.17
COL16A1-210ENST00000474000 CCDC88BA6NC98 1476 aa22.29■■□□□ 1.16
COL16A1-210ENST00000474000 ZNF608Q9ULD9 1512 aaPredicted RBP22.18■■□□□ 1.14
COL16A1-210ENST00000474000 IFT140Q96RY7 1462 aa22.15■■□□□ 1.14
COL16A1-210ENST00000474000 PRDM2Q13029 1718 aa22.14■■□□□ 1.14
COL16A1-210ENST00000474000 TOPBP1Q92547 1522 aa22.1■■□□□ 1.13
COL16A1-210ENST00000474000 RIMBP3CA6NJZ7 1639 aa22.09■■□□□ 1.13
COL16A1-210ENST00000474000 RIMBP3BA6NNM3 1639 aa22.09■■□□□ 1.13
COL16A1-210ENST00000474000 RIMBP3Q9UFD9 1639 aa22.09■■□□□ 1.13
COL16A1-210ENST00000474000 ABCC8Q09428 1581 aa22.01■■□□□ 1.11
COL16A1-210ENST00000474000 ARHGEF11O15085 1522 aa22.01■■□□□ 1.11
COL16A1-210ENST00000474000 AQRO60306 1485 aaKnown RBP eCLIP21.97■■□□□ 1.11
COL16A1-210ENST00000474000 EIF4G3O43432 1585 aaKnown RBP21.97■■□□□ 1.11
COL16A1-210ENST00000474000 DNMBPQ6XZF7 1577 aa21.97■■□□□ 1.11
COL16A1-210ENST00000474000 CYB5RLQ6IPT4 315 aa21.95■■□□□ 1.1
COL16A1-210ENST00000474000 FBLN2P98095 1184 aa21.9■■□□□ 1.1
COL16A1-210ENST00000474000 TARBP1Q13395 1621 aaKnown RBP21.9■■□□□ 1.1
COL16A1-210ENST00000474000 POLA1P09884 1462 aaPredicted RBP21.87■■□□□ 1.09
COL16A1-210ENST00000474000 CHD1O14646 1710 aa21.84■■□□□ 1.09
COL16A1-210ENST00000474000 RAD54L2Q9Y4B4 1467 aa21.83■■□□□ 1.09
COL16A1-210ENST00000474000 TDRD9Q8NDG6 1382 aaKnown RBP21.81■■□□□ 1.08
COL16A1-210ENST00000474000 SOGA1O94964 1423 aa21.8■■□□□ 1.08
COL16A1-210ENST00000474000 ARAP1Q96P48 1450 aa21.78■■□□□ 1.08
COL16A1-210ENST00000474000 TRHP20396 242 aaPredicted RBP21.78■■□□□ 1.08
COL16A1-210ENST00000474000 SUPT5HO00267 1087 aaKnown RBP21.77■■□□□ 1.08
COL16A1-210ENST00000474000 SNAPC4Q5SXM2 1469 aa21.7■■□□□ 1.06
COL16A1-210ENST00000474000 FGD5Q6ZNL6 1462 aa21.7■■□□□ 1.06
COL16A1-210ENST00000474000 CHMP7Q8WUX9 453 aaPredicted RBP21.68■■□□□ 1.06
COL16A1-210ENST00000474000 CUX1P39880 1505 aa21.66■■□□□ 1.06
COL16A1-210ENST00000474000 CLASP1Q7Z460 1538 aa21.6■■□□□ 1.05
COL16A1-210ENST00000474000 WDR97A6NE52 1622 aa21.6■■□□□ 1.05
COL16A1-210ENST00000474000 GRIN2BQ13224 1484 aa21.59■■□□□ 1.05
COL16A1-210ENST00000474000 MAGI1Q96QZ7 1491 aaPredicted RBP21.59■■□□□ 1.05
COL16A1-210ENST00000474000 SYNJ1O43426 1573 aa21.57■■□□□ 1.04
COL16A1-210ENST00000474000 SYNJ2O15056 1496 aa21.54■■□□□ 1.04
COL16A1-210ENST00000474000 GAPVD1Q14C86 1478 aa21.5■■□□□ 1.03
COL16A1-210ENST00000474000 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
COL16A1-210ENST00000474000 PBRM1Q86U86 1689 aa21.44■■□□□ 1.02
COL16A1-210ENST00000474000 WRNQ14191 1432 aaPredicted RBP eCLIP21.42■■□□□ 1.02
COL16A1-210ENST00000474000 ABCA5Q8WWZ7 1642 aa21.37■■□□□ 1.01
COL16A1-210ENST00000474000 ERCC6L2Q5T890 1561 aa21.31■■□□□ 1
COL16A1-210ENST00000474000 GRIN2AQ12879 1464 aa21.31■■□□□ 1
COL16A1-210ENST00000474000 AEBP2Q6ZN18 517 aaPredicted RBP21.29■■□□□ 1
COL16A1-210ENST00000474000 TOP2BQ02880 1626 aa21.29■■□□□ 1
COL16A1-210ENST00000474000 NUP160Q12769 1436 aa21.25■□□□□ 0.99
COL16A1-210ENST00000474000 CEP170Q5SW79 1584 aa21.24■□□□□ 0.99
COL16A1-210ENST00000474000 ADAMTS12P58397 1594 aa21.23■□□□□ 0.99
COL16A1-210ENST00000474000 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
COL16A1-210ENST00000474000 FHAD1B1AJZ9 1412 aa21.22■□□□□ 0.99
COL16A1-210ENST00000474000 ERICH3Q5RHP9 1530 aa21.15■□□□□ 0.98
COL16A1-210ENST00000474000 SHROOM2Q13796 1616 aa21.14■□□□□ 0.97
COL16A1-210ENST00000474000 JPH4Q96JJ6 628 aa21.11■□□□□ 0.97
COL16A1-210ENST00000474000 PRG4Q92954 1404 aaPredicted RBP21.1■□□□□ 0.97
COL16A1-210ENST00000474000 IGF1RP08069 1367 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms