RNA–Protein interactions for RNA: ENST00000473943.1

PHF20-209, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-209ENST00000473943 NISCHQ9Y2I1 1504 aa34.35■■■■□ 3.09
PHF20-209ENST00000473943 CCDC180Q9P1Z9 1646 aa30.68■■■□□ 2.5
PHF20-209ENST00000473943 ABCC9O60706 1549 aa30.62■■■□□ 2.49
PHF20-209ENST00000473943 RB1CC1Q8TDY2 1594 aa29.19■■■□□ 2.26
PHF20-209ENST00000473943 DCAF8L2P0C7V8 631 aa29.09■■■□□ 2.25
PHF20-209ENST00000473943 NACADO15069 1562 aa29.04■■■□□ 2.24
PHF20-209ENST00000473943 MYO15BQ96JP2 1530 aa28.68■■■□□ 2.18
PHF20-209ENST00000473943 PABPN1Q86U42 306 aaKnown RBP eCLIP28.6■■■□□ 2.17
PHF20-209ENST00000473943 DNAJC5BQ9UF47 199 aa28.58■■■□□ 2.17
PHF20-209ENST00000473943 ZCCHC6Q5VYS8 1495 aaKnown RBP28.47■■■□□ 2.15
PHF20-209ENST00000473943 UNC13AQ9UPW8 1703 aa28.4■■■□□ 2.14
PHF20-209ENST00000473943 DCAF1Q9Y4B6 1507 aa28.37■■■□□ 2.13
PHF20-209ENST00000473943 BICRAQ9NZM4 1560 aa28.28■■■□□ 2.12
PHF20-209ENST00000473943 SCRIBQ14160 1630 aa28.01■■■□□ 2.07
PHF20-209ENST00000473943 SHROOM4Q9ULL8 1493 aa27.96■■■□□ 2.07
PHF20-209ENST00000473943 CC2D2AQ9P2K1 1620 aa27.62■■■□□ 2.01
PHF20-209ENST00000473943 EIF4G1Q04637 1599 aaKnown RBP27.6■■■□□ 2.01
PHF20-209ENST00000473943 CECR2Q9BXF3 1484 aa27.57■■■□□ 2
PHF20-209ENST00000473943 NCAPD3P42695 1498 aa26.82■■□□□ 1.88
PHF20-209ENST00000473943 ATAD2BQ9ULI0 1458 aa26.76■■□□□ 1.87
PHF20-209ENST00000473943 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
PHF20-209ENST00000473943 SMARCA2P51531 1590 aa26.69■■□□□ 1.86
PHF20-209ENST00000473943 BAZ1AQ9NRL2 1556 aaPredicted RBP26.66■■□□□ 1.86
PHF20-209ENST00000473943 HMGXB3Q12766 1538 aa26.59■■□□□ 1.85
PHF20-209ENST00000473943 BAZ1BQ9UIG0 1483 aaKnown RBP26.52■■□□□ 1.84
PHF20-209ENST00000473943 MROH2BQ7Z745 1585 aa26.46■■□□□ 1.83
PHF20-209ENST00000473943 ERCC6Q03468 1493 aa26.46■■□□□ 1.83
PHF20-209ENST00000473943 PEG3Q9GZU2 1588 aa26.46■■□□□ 1.83
PHF20-209ENST00000473943 NESP48681 1621 aa26.32■■□□□ 1.8
PHF20-209ENST00000473943 CUX2O14529 1486 aa26.31■■□□□ 1.8
PHF20-209ENST00000473943 DNAJC5Q9H3Z4 198 aa26.16■■□□□ 1.78
PHF20-209ENST00000473943 LAMC3Q9Y6N6 1575 aa26.16■■□□□ 1.78
PHF20-209ENST00000473943 WIZO95785 1651 aa26.12■■□□□ 1.77
PHF20-209ENST00000473943 PDS5BQ9NTI5 1447 aa26.08■■□□□ 1.77
PHF20-209ENST00000473943 CADPSQ9ULU8 1353 aa26.05■■□□□ 1.76
PHF20-209ENST00000473943 RSF1Q96T23 1441 aaPredicted RBP26.01■■□□□ 1.75
PHF20-209ENST00000473943 THOC2Q8NI27 1593 aaKnown RBP25.95■■□□□ 1.75
PHF20-209ENST00000473943 KIF21AQ7Z4S6 1674 aa25.92■■□□□ 1.74
PHF20-209ENST00000473943 TOP2AP11388 1531 aaKnown RBP25.83■■□□□ 1.72
PHF20-209ENST00000473943 MRC2Q9UBG0 1479 aa25.79■■□□□ 1.72
PHF20-209ENST00000473943 CFTRP13569 1480 aa25.75■■□□□ 1.71
PHF20-209ENST00000473943 CEP164Q9UPV0 1460 aa25.74■■□□□ 1.71
PHF20-209ENST00000473943 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
PHF20-209ENST00000473943 WDR62O43379 1518 aa25.68■■□□□ 1.7
PHF20-209ENST00000473943 CCDC88BA6NC98 1476 aa25.57■■□□□ 1.68
PHF20-209ENST00000473943 URB2Q14146 1524 aaKnown RBP25.47■■□□□ 1.67
PHF20-209ENST00000473943 PRDM2Q13029 1718 aa25.38■■□□□ 1.65
PHF20-209ENST00000473943 ABCC8Q09428 1581 aa25.24■■□□□ 1.63
PHF20-209ENST00000473943 OSCARQ8IYS5 282 aa25.24■■□□□ 1.63
PHF20-209ENST00000473943 TOPBP1Q92547 1522 aa25.23■■□□□ 1.63
PHF20-209ENST00000473943 IFT140Q96RY7 1462 aa25.22■■□□□ 1.63
PHF20-209ENST00000473943 DNMBPQ6XZF7 1577 aa25.14■■□□□ 1.62
PHF20-209ENST00000473943 ZNF608Q9ULD9 1512 aaPredicted RBP25.14■■□□□ 1.62
PHF20-209ENST00000473943 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
PHF20-209ENST00000473943 SUPT5HO00267 1087 aaKnown RBP25.09■■□□□ 1.61
PHF20-209ENST00000473943 POLA1P09884 1462 aaPredicted RBP24.99■■□□□ 1.59
PHF20-209ENST00000473943 EIF4G3O43432 1585 aaKnown RBP24.97■■□□□ 1.59
PHF20-209ENST00000473943 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.59
PHF20-209ENST00000473943 TARBP1Q13395 1621 aaKnown RBP24.96■■□□□ 1.59
PHF20-209ENST00000473943 SOGA1O94964 1423 aa24.94■■□□□ 1.58
PHF20-209ENST00000473943 RAD54L2Q9Y4B4 1467 aa24.91■■□□□ 1.58
PHF20-209ENST00000473943 FBLN2P98095 1184 aa24.87■■□□□ 1.57
PHF20-209ENST00000473943 TDRD9Q8NDG6 1382 aaKnown RBP24.87■■□□□ 1.57
PHF20-209ENST00000473943 FGD5Q6ZNL6 1462 aa24.86■■□□□ 1.57
PHF20-209ENST00000473943 CUX1P39880 1505 aa24.85■■□□□ 1.57
PHF20-209ENST00000473943 RIMBP3CA6NJZ7 1639 aa24.75■■□□□ 1.55
PHF20-209ENST00000473943 RIMBP3BA6NNM3 1639 aa24.75■■□□□ 1.55
PHF20-209ENST00000473943 RIMBP3Q9UFD9 1639 aa24.75■■□□□ 1.55
PHF20-209ENST00000473943 WDR97A6NE52 1622 aa24.73■■□□□ 1.55
PHF20-209ENST00000473943 CHD1O14646 1710 aa24.72■■□□□ 1.55
PHF20-209ENST00000473943 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
PHF20-209ENST00000473943 CHMP7Q8WUX9 453 aaPredicted RBP24.7■■□□□ 1.54
PHF20-209ENST00000473943 SNAPC4Q5SXM2 1469 aa24.7■■□□□ 1.54
PHF20-209ENST00000473943 GRIN2BQ13224 1484 aa24.68■■□□□ 1.54
PHF20-209ENST00000473943 MAGI1Q96QZ7 1491 aaPredicted RBP24.64■■□□□ 1.54
PHF20-209ENST00000473943 CYB5RLQ6IPT4 315 aa24.64■■□□□ 1.54
PHF20-209ENST00000473943 GAPVD1Q14C86 1478 aa24.62■■□□□ 1.53
PHF20-209ENST00000473943 ABCA10Q8WWZ4 1543 aa24.59■■□□□ 1.53
PHF20-209ENST00000473943 WRNQ14191 1432 aaPredicted RBP eCLIP24.58■■□□□ 1.53
PHF20-209ENST00000473943 SYNJ2O15056 1496 aa24.57■■□□□ 1.52
PHF20-209ENST00000473943 SYNJ1O43426 1573 aa24.52■■□□□ 1.52
PHF20-209ENST00000473943 TOP2BQ02880 1626 aa24.49■■□□□ 1.51
PHF20-209ENST00000473943 PBRM1Q86U86 1689 aa24.49■■□□□ 1.51
PHF20-209ENST00000473943 ABCA5Q8WWZ7 1642 aa24.48■■□□□ 1.51
PHF20-209ENST00000473943 ARAP1Q96P48 1450 aa24.48■■□□□ 1.51
PHF20-209ENST00000473943 CLASP1Q7Z460 1538 aa24.47■■□□□ 1.51
PHF20-209ENST00000473943 BIVM-ERCC5R4GMW8 1640 aa24.46■■□□□ 1.51
PHF20-209ENST00000473943 GRIN2AQ12879 1464 aa24.33■■□□□ 1.49
PHF20-209ENST00000473943 TRHP20396 242 aaPredicted RBP24.33■■□□□ 1.49
PHF20-209ENST00000473943 FHAD1B1AJZ9 1412 aa24.32■■□□□ 1.48
PHF20-209ENST00000473943 ADAMTS12P58397 1594 aa24.29■■□□□ 1.48
PHF20-209ENST00000473943 ERICH3Q5RHP9 1530 aa24.28■■□□□ 1.48
PHF20-209ENST00000473943 NUP160Q12769 1436 aa24.25■■□□□ 1.47
PHF20-209ENST00000473943 CEP170Q5SW79 1584 aa24.2■■□□□ 1.46
PHF20-209ENST00000473943 KIF27Q86VH2 1401 aa24.1■■□□□ 1.45
PHF20-209ENST00000473943 ERCC6L2Q5T890 1561 aa24.1■■□□□ 1.45
PHF20-209ENST00000473943 JPH4Q96JJ6 628 aa24.09■■□□□ 1.45
PHF20-209ENST00000473943 IGF1RP08069 1367 aa24.07■■□□□ 1.44
PHF20-209ENST00000473943 SHROOM2Q13796 1616 aa24.06■■□□□ 1.44
PHF20-209ENST00000473943 PRG4Q92954 1404 aaPredicted RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms