RNA–Protein interactions for RNA: ENST00000473941.5

KCNT1-204, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

TSL 3

Gene KCNT1, Length 1,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-204ENST00000473941 NISCHQ9Y2I1 1504 aa55.92■■■■■ 6.54
KCNT1-204ENST00000473941 CCDC180Q9P1Z9 1646 aa50.07■■■■■ 5.61
KCNT1-204ENST00000473941 ABCC9O60706 1549 aa49.78■■■■■ 5.56
KCNT1-204ENST00000473941 RB1CC1Q8TDY2 1594 aa47.48■■■■■ 5.19
KCNT1-204ENST00000473941 NACADO15069 1562 aa47.22■■■■■ 5.15
KCNT1-204ENST00000473941 DCAF8L2P0C7V8 631 aa47.01■■■■■ 5.12
KCNT1-204ENST00000473941 MYO15BQ96JP2 1530 aa46.63■■■■■ 5.05
KCNT1-204ENST00000473941 UNC13AQ9UPW8 1703 aa46.6■■■■■ 5.05
KCNT1-204ENST00000473941 DNAJC5BQ9UF47 199 aa46.44■■■■■ 5.02
KCNT1-204ENST00000473941 ZCCHC6Q5VYS8 1495 aaKnown RBP46.42■■■■■ 5.02
KCNT1-204ENST00000473941 PABPN1Q86U42 306 aaKnown RBP eCLIP46.37■■■■■ 5.01
KCNT1-204ENST00000473941 BICRAQ9NZM4 1560 aa46.18■■■■■ 4.98
KCNT1-204ENST00000473941 DCAF1Q9Y4B6 1507 aa46.17■■■■■ 4.98
KCNT1-204ENST00000473941 SCRIBQ14160 1630 aa45.68■■■■■ 4.9
KCNT1-204ENST00000473941 SHROOM4Q9ULL8 1493 aa45.42■■■■■ 4.86
KCNT1-204ENST00000473941 CC2D2AQ9P2K1 1620 aa45.01■■■■■ 4.8
KCNT1-204ENST00000473941 EIF4G1Q04637 1599 aaKnown RBP44.96■■■■■ 4.79
KCNT1-204ENST00000473941 CECR2Q9BXF3 1484 aa44.78■■■■■ 4.76
KCNT1-204ENST00000473941 SMARCA4P51532 1647 aa43.59■■■■■ 4.57
KCNT1-204ENST00000473941 NCAPD3P42695 1498 aa43.57■■■■■ 4.56
KCNT1-204ENST00000473941 ATAD2BQ9ULI0 1458 aa43.51■■■■■ 4.56
KCNT1-204ENST00000473941 SMARCA2P51531 1590 aa43.39■■■■■ 4.54
KCNT1-204ENST00000473941 BAZ1AQ9NRL2 1556 aaPredicted RBP43.36■■■■■ 4.53
KCNT1-204ENST00000473941 HMGXB3Q12766 1538 aa43.3■■■■■ 4.52
KCNT1-204ENST00000473941 PEG3Q9GZU2 1588 aa43.14■■■■■ 4.5
KCNT1-204ENST00000473941 MROH2BQ7Z745 1585 aa43.13■■■■■ 4.5
KCNT1-204ENST00000473941 BAZ1BQ9UIG0 1483 aaKnown RBP43.1■■■■■ 4.49
KCNT1-204ENST00000473941 ERCC6Q03468 1493 aa42.9■■■■■ 4.46
KCNT1-204ENST00000473941 NESP48681 1621 aa42.89■■■■■ 4.46
KCNT1-204ENST00000473941 CUX2O14529 1486 aa42.7■■■■■ 4.43
KCNT1-204ENST00000473941 WIZO95785 1651 aa42.67■■■■■ 4.42
KCNT1-204ENST00000473941 LAMC3Q9Y6N6 1575 aa42.56■■■■■ 4.4
KCNT1-204ENST00000473941 KIF21AQ7Z4S6 1674 aa42.4■■■■■ 4.38
KCNT1-204ENST00000473941 THOC2Q8NI27 1593 aaKnown RBP42.39■■■■■ 4.38
KCNT1-204ENST00000473941 DNAJC5Q9H3Z4 198 aa42.34■■■■■ 4.37
KCNT1-204ENST00000473941 RSF1Q96T23 1441 aaPredicted RBP42.3■■■■■ 4.36
KCNT1-204ENST00000473941 PDS5BQ9NTI5 1447 aa42.25■■■■■ 4.35
KCNT1-204ENST00000473941 CADPSQ9ULU8 1353 aa42.25■■■■■ 4.35
KCNT1-204ENST00000473941 TOP2AP11388 1531 aaKnown RBP42.08■■■■■ 4.33
KCNT1-204ENST00000473941 MRC2Q9UBG0 1479 aa41.92■■■■■ 4.3
KCNT1-204ENST00000473941 CFTRP13569 1480 aa41.86■■■■■ 4.29
KCNT1-204ENST00000473941 WDR62O43379 1518 aa41.84■■■■■ 4.29
KCNT1-204ENST00000473941 FANCD2Q9BXW9 1451 aa41.81■■■■■ 4.28
KCNT1-204ENST00000473941 CEP164Q9UPV0 1460 aa41.81■■■■■ 4.28
KCNT1-204ENST00000473941 PRDM2Q13029 1718 aa41.61■■■■■ 4.25
KCNT1-204ENST00000473941 CCDC88BA6NC98 1476 aa41.6■■■■■ 4.25
KCNT1-204ENST00000473941 URB2Q14146 1524 aaKnown RBP41.49■■■■■ 4.23
KCNT1-204ENST00000473941 TOPBP1Q92547 1522 aa41.08■■■■■ 4.17
KCNT1-204ENST00000473941 DNMBPQ6XZF7 1577 aa40.95■■■■■ 4.15
KCNT1-204ENST00000473941 IFT140Q96RY7 1462 aa40.95■■■■■ 4.15
KCNT1-204ENST00000473941 ZNF608Q9ULD9 1512 aaPredicted RBP40.93■■■■■ 4.14
KCNT1-204ENST00000473941 ABCC8Q09428 1581 aa40.91■■■■■ 4.14
KCNT1-204ENST00000473941 OSCARQ8IYS5 282 aa40.77■■■■■ 4.12
KCNT1-204ENST00000473941 EIF4G3O43432 1585 aaKnown RBP40.74■■■■■ 4.11
KCNT1-204ENST00000473941 TARBP1Q13395 1621 aaKnown RBP40.73■■■■■ 4.11
KCNT1-204ENST00000473941 POLA1P09884 1462 aaPredicted RBP40.67■■■■■ 4.1
KCNT1-204ENST00000473941 SUPT5HO00267 1087 aaKnown RBP40.65■■■■■ 4.1
KCNT1-204ENST00000473941 TRIM41Q8WV44 630 aa40.63■■■■■ 4.09
KCNT1-204ENST00000473941 AQRO60306 1485 aaKnown RBP eCLIP40.57■■■■■ 4.08
KCNT1-204ENST00000473941 RAD54L2Q9Y4B4 1467 aa40.54■■■■■ 4.08
KCNT1-204ENST00000473941 CUX1P39880 1505 aa40.51■■■■■ 4.08
KCNT1-204ENST00000473941 FGD5Q6ZNL6 1462 aa40.46■■■■■ 4.07
KCNT1-204ENST00000473941 SOGA1O94964 1423 aa40.44■■■■■ 4.06
KCNT1-204ENST00000473941 CHD1O14646 1710 aa40.44■■■■■ 4.06
KCNT1-204ENST00000473941 TDRD9Q8NDG6 1382 aaKnown RBP40.35■■■■■ 4.05
KCNT1-204ENST00000473941 RIMBP3CA6NJZ7 1639 aa40.34■■■■■ 4.05
KCNT1-204ENST00000473941 RIMBP3BA6NNM3 1639 aa40.34■■■■■ 4.05
KCNT1-204ENST00000473941 RIMBP3Q9UFD9 1639 aa40.34■■■■■ 4.05
KCNT1-204ENST00000473941 WDR97A6NE52 1622 aa40.24■■■■■ 4.03
KCNT1-204ENST00000473941 ARHGEF11O15085 1522 aa40.21■■■■■ 4.03
KCNT1-204ENST00000473941 FBLN2P98095 1184 aa40.19■■■■■ 4.02
KCNT1-204ENST00000473941 SNAPC4Q5SXM2 1469 aa40.17■■■■■ 4.02
KCNT1-204ENST00000473941 GRIN2BQ13224 1484 aa40.07■■■■■ 4
KCNT1-204ENST00000473941 PBRM1Q86U86 1689 aa40.05■■■■■ 4
KCNT1-204ENST00000473941 MAGI1Q96QZ7 1491 aaPredicted RBP40.03■■■■■ 4
KCNT1-204ENST00000473941 ABCA10Q8WWZ4 1543 aa40■■■■□ 3.99
KCNT1-204ENST00000473941 GAPVD1Q14C86 1478 aa39.98■■■■□ 3.99
KCNT1-204ENST00000473941 ABCA5Q8WWZ7 1642 aa39.97■■■■□ 3.99
KCNT1-204ENST00000473941 BIVM-ERCC5R4GMW8 1640 aa39.95■■■■□ 3.99
KCNT1-204ENST00000473941 SYNJ1O43426 1573 aa39.93■■■■□ 3.98
KCNT1-204ENST00000473941 TOP2BQ02880 1626 aa39.92■■■■□ 3.98
KCNT1-204ENST00000473941 CHMP7Q8WUX9 453 aaPredicted RBP39.92■■■■□ 3.98
KCNT1-204ENST00000473941 SYNJ2O15056 1496 aa39.91■■■■□ 3.98
KCNT1-204ENST00000473941 CLASP1Q7Z460 1538 aa39.91■■■■□ 3.98
KCNT1-204ENST00000473941 WRNQ14191 1432 aaPredicted RBP eCLIP39.89■■■■□ 3.98
KCNT1-204ENST00000473941 CYB5RLQ6IPT4 315 aa39.85■■■■□ 3.97
KCNT1-204ENST00000473941 ARAP1Q96P48 1450 aa39.85■■■■□ 3.97
KCNT1-204ENST00000473941 ADAMTS12P58397 1594 aa39.63■■■■□ 3.94
KCNT1-204ENST00000473941 GRIN2AQ12879 1464 aa39.57■■■■□ 3.93
KCNT1-204ENST00000473941 ERICH3Q5RHP9 1530 aa39.5■■■■□ 3.91
KCNT1-204ENST00000473941 CEP170Q5SW79 1584 aa39.48■■■■□ 3.91
KCNT1-204ENST00000473941 FHAD1B1AJZ9 1412 aa39.46■■■■□ 3.91
KCNT1-204ENST00000473941 NUP160Q12769 1436 aa39.42■■■■□ 3.9
KCNT1-204ENST00000473941 ERCC6L2Q5T890 1561 aa39.36■■■■□ 3.89
KCNT1-204ENST00000473941 TRHP20396 242 aaPredicted RBP39.27■■■■□ 3.88
KCNT1-204ENST00000473941 SHROOM2Q13796 1616 aa39.27■■■■□ 3.88
KCNT1-204ENST00000473941 RUSC2Q8N2Y8 1516 aa39.08■■■■□ 3.85
KCNT1-204ENST00000473941 KIF27Q86VH2 1401 aa39.07■■■■□ 3.85
KCNT1-204ENST00000473941 IGF1RP08069 1367 aa39.06■■■■□ 3.84
KCNT1-204ENST00000473941 CUL7Q14999 1698 aa39.01■■■■□ 3.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms