RNA–Protein interactions for RNA: ENST00000473929.1

PGAM1-203, Transcript of phosphoglycerate mutase 1, humanhuman

TSL 2

Gene PGAM1, Length 497 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM1-203ENST00000473929 NISCHQ9Y2I1 1504 aa34.51■■■■□ 3.12
PGAM1-203ENST00000473929 CCDC180Q9P1Z9 1646 aa30.81■■■□□ 2.52
PGAM1-203ENST00000473929 ABCC9O60706 1549 aa30.57■■■□□ 2.48
PGAM1-203ENST00000473929 DNAJC5BQ9UF47 199 aa29.46■■■□□ 2.31
PGAM1-203ENST00000473929 RB1CC1Q8TDY2 1594 aa29.11■■■□□ 2.25
PGAM1-203ENST00000473929 NACADO15069 1562 aa29.02■■■□□ 2.24
PGAM1-203ENST00000473929 DCAF8L2P0C7V8 631 aa28.83■■■□□ 2.21
PGAM1-203ENST00000473929 MYO15BQ96JP2 1530 aa28.8■■■□□ 2.2
PGAM1-203ENST00000473929 ZCCHC6Q5VYS8 1495 aaKnown RBP28.72■■■□□ 2.19
PGAM1-203ENST00000473929 DCAF1Q9Y4B6 1507 aa28.59■■■□□ 2.17
PGAM1-203ENST00000473929 UNC13AQ9UPW8 1703 aa28.4■■■□□ 2.14
PGAM1-203ENST00000473929 PABPN1Q86U42 306 aaKnown RBP eCLIP28.39■■■□□ 2.14
PGAM1-203ENST00000473929 BICRAQ9NZM4 1560 aa28.21■■■□□ 2.11
PGAM1-203ENST00000473929 SCRIBQ14160 1630 aa28.06■■■□□ 2.08
PGAM1-203ENST00000473929 SHROOM4Q9ULL8 1493 aa27.98■■■□□ 2.07
PGAM1-203ENST00000473929 DNAJC5Q9H3Z4 198 aa27.66■■■□□ 2.02
PGAM1-203ENST00000473929 CECR2Q9BXF3 1484 aa27.64■■■□□ 2.01
PGAM1-203ENST00000473929 CC2D2AQ9P2K1 1620 aa27.55■■■□□ 2
PGAM1-203ENST00000473929 EIF4G1Q04637 1599 aaKnown RBP27.5■■□□□ 1.99
PGAM1-203ENST00000473929 SMARCA4P51532 1647 aa26.83■■□□□ 1.89
PGAM1-203ENST00000473929 BAZ1AQ9NRL2 1556 aaPredicted RBP26.79■■□□□ 1.88
PGAM1-203ENST00000473929 NCAPD3P42695 1498 aa26.77■■□□□ 1.88
PGAM1-203ENST00000473929 ATAD2BQ9ULI0 1458 aa26.74■■□□□ 1.87
PGAM1-203ENST00000473929 SMARCA2P51531 1590 aa26.72■■□□□ 1.87
PGAM1-203ENST00000473929 CUX2O14529 1486 aa26.68■■□□□ 1.86
PGAM1-203ENST00000473929 HMGXB3Q12766 1538 aa26.65■■□□□ 1.86
PGAM1-203ENST00000473929 PEG3Q9GZU2 1588 aa26.6■■□□□ 1.85
PGAM1-203ENST00000473929 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
PGAM1-203ENST00000473929 BAZ1BQ9UIG0 1483 aaKnown RBP26.51■■□□□ 1.83
PGAM1-203ENST00000473929 ERCC6Q03468 1493 aa26.46■■□□□ 1.83
PGAM1-203ENST00000473929 WIZO95785 1651 aa26.27■■□□□ 1.8
PGAM1-203ENST00000473929 RSF1Q96T23 1441 aaPredicted RBP26.19■■□□□ 1.78
PGAM1-203ENST00000473929 NESP48681 1621 aa26.16■■□□□ 1.78
PGAM1-203ENST00000473929 LAMC3Q9Y6N6 1575 aa26.12■■□□□ 1.77
PGAM1-203ENST00000473929 TRIM41Q8WV44 630 aa26.07■■□□□ 1.76
PGAM1-203ENST00000473929 TOP2AP11388 1531 aaKnown RBP26.02■■□□□ 1.76
PGAM1-203ENST00000473929 CADPSQ9ULU8 1353 aa25.96■■□□□ 1.75
PGAM1-203ENST00000473929 PDS5BQ9NTI5 1447 aa25.94■■□□□ 1.74
PGAM1-203ENST00000473929 THOC2Q8NI27 1593 aaKnown RBP25.87■■□□□ 1.73
PGAM1-203ENST00000473929 KIF21AQ7Z4S6 1674 aa25.86■■□□□ 1.73
PGAM1-203ENST00000473929 CFTRP13569 1480 aa25.78■■□□□ 1.72
PGAM1-203ENST00000473929 MRC2Q9UBG0 1479 aa25.69■■□□□ 1.7
PGAM1-203ENST00000473929 CCDC88BA6NC98 1476 aa25.68■■□□□ 1.7
PGAM1-203ENST00000473929 FANCD2Q9BXW9 1451 aa25.67■■□□□ 1.7
PGAM1-203ENST00000473929 CEP164Q9UPV0 1460 aa25.67■■□□□ 1.7
PGAM1-203ENST00000473929 WDR62O43379 1518 aa25.63■■□□□ 1.69
PGAM1-203ENST00000473929 PRDM2Q13029 1718 aa25.56■■□□□ 1.68
PGAM1-203ENST00000473929 URB2Q14146 1524 aaKnown RBP25.42■■□□□ 1.66
PGAM1-203ENST00000473929 OSCARQ8IYS5 282 aa25.42■■□□□ 1.66
PGAM1-203ENST00000473929 SUPT5HO00267 1087 aaKnown RBP25.28■■□□□ 1.64
PGAM1-203ENST00000473929 ABCC8Q09428 1581 aa25.24■■□□□ 1.63
PGAM1-203ENST00000473929 TOPBP1Q92547 1522 aa25.23■■□□□ 1.63
PGAM1-203ENST00000473929 DNMBPQ6XZF7 1577 aa25.2■■□□□ 1.62
PGAM1-203ENST00000473929 IFT140Q96RY7 1462 aa25.15■■□□□ 1.62
PGAM1-203ENST00000473929 RIMBP3CA6NJZ7 1639 aa25.05■■□□□ 1.6
PGAM1-203ENST00000473929 RIMBP3BA6NNM3 1639 aa25.05■■□□□ 1.6
PGAM1-203ENST00000473929 RIMBP3Q9UFD9 1639 aa25.05■■□□□ 1.6
PGAM1-203ENST00000473929 ZNF608Q9ULD9 1512 aaPredicted RBP25.02■■□□□ 1.6
PGAM1-203ENST00000473929 POLA1P09884 1462 aaPredicted RBP25.01■■□□□ 1.59
PGAM1-203ENST00000473929 TARBP1Q13395 1621 aaKnown RBP24.98■■□□□ 1.59
PGAM1-203ENST00000473929 CUX1P39880 1505 aa24.96■■□□□ 1.59
PGAM1-203ENST00000473929 EIF4G3O43432 1585 aaKnown RBP24.95■■□□□ 1.58
PGAM1-203ENST00000473929 ARHGEF11O15085 1522 aa24.91■■□□□ 1.58
PGAM1-203ENST00000473929 FGD5Q6ZNL6 1462 aa24.9■■□□□ 1.58
PGAM1-203ENST00000473929 SOGA1O94964 1423 aa24.88■■□□□ 1.57
PGAM1-203ENST00000473929 RAD54L2Q9Y4B4 1467 aa24.88■■□□□ 1.57
PGAM1-203ENST00000473929 CYB5RLQ6IPT4 315 aa24.87■■□□□ 1.57
PGAM1-203ENST00000473929 AQRO60306 1485 aaKnown RBP eCLIP24.84■■□□□ 1.579e-11■■■■□ 20.1
PGAM1-203ENST00000473929 TRHP20396 242 aaPredicted RBP24.84■■□□□ 1.57
PGAM1-203ENST00000473929 WDR97A6NE52 1622 aa24.83■■□□□ 1.57
PGAM1-203ENST00000473929 TDRD9Q8NDG6 1382 aaKnown RBP24.75■■□□□ 1.55
PGAM1-203ENST00000473929 WRNQ14191 1432 aaPredicted RBP eCLIP24.71■■□□□ 1.55
PGAM1-203ENST00000473929 AEBP2Q6ZN18 517 aaPredicted RBP24.71■■□□□ 1.55
PGAM1-203ENST00000473929 TOP2BQ02880 1626 aa24.7■■□□□ 1.54
PGAM1-203ENST00000473929 BIVM-ERCC5R4GMW8 1640 aa24.7■■□□□ 1.54
PGAM1-203ENST00000473929 ABCA10Q8WWZ4 1543 aa24.67■■□□□ 1.54
PGAM1-203ENST00000473929 SYNJ1O43426 1573 aa24.66■■□□□ 1.54
PGAM1-203ENST00000473929 GRIN2BQ13224 1484 aa24.65■■□□□ 1.54
PGAM1-203ENST00000473929 CHD1O14646 1710 aa24.65■■□□□ 1.54
PGAM1-203ENST00000473929 SNAPC4Q5SXM2 1469 aa24.64■■□□□ 1.54
PGAM1-203ENST00000473929 ARAP1Q96P48 1450 aa24.62■■□□□ 1.53
PGAM1-203ENST00000473929 MAGI1Q96QZ7 1491 aaPredicted RBP24.62■■□□□ 1.53
PGAM1-203ENST00000473929 GAPVD1Q14C86 1478 aa24.61■■□□□ 1.53
PGAM1-203ENST00000473929 ABCA5Q8WWZ7 1642 aa24.6■■□□□ 1.53
PGAM1-203ENST00000473929 PBRM1Q86U86 1689 aa24.57■■□□□ 1.52
PGAM1-203ENST00000473929 FBLN2P98095 1184 aa24.56■■□□□ 1.52
PGAM1-203ENST00000473929 SYNJ2O15056 1496 aa24.51■■□□□ 1.51
PGAM1-203ENST00000473929 CHMP7Q8WUX9 453 aaPredicted RBP24.48■■□□□ 1.51
PGAM1-203ENST00000473929 CLASP1Q7Z460 1538 aa24.41■■□□□ 1.5
PGAM1-203ENST00000473929 ADAMTS12P58397 1594 aa24.39■■□□□ 1.5
PGAM1-203ENST00000473929 ERICH3Q5RHP9 1530 aa24.38■■□□□ 1.49
PGAM1-203ENST00000473929 FHAD1B1AJZ9 1412 aa24.33■■□□□ 1.49
PGAM1-203ENST00000473929 GRIN2AQ12879 1464 aa24.32■■□□□ 1.48
PGAM1-203ENST00000473929 NUP160Q12769 1436 aa24.24■■□□□ 1.47
PGAM1-203ENST00000473929 KIF27Q86VH2 1401 aa24.22■■□□□ 1.47
PGAM1-203ENST00000473929 CEP170Q5SW79 1584 aa24.21■■□□□ 1.47
PGAM1-203ENST00000473929 IGF1RP08069 1367 aa24.13■■□□□ 1.45
PGAM1-203ENST00000473929 CUL7Q14999 1698 aa24.12■■□□□ 1.45
PGAM1-203ENST00000473929 SHROOM2Q13796 1616 aa24.08■■□□□ 1.45
PGAM1-203ENST00000473929 RUSC2Q8N2Y8 1516 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms