RNA–Protein interactions for RNA: ENST00000473868.5

SNX7-203, Transcript of sorting nexin 7, humanhuman

TSL 3

Gene SNX7, Length 253 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX7-203ENST00000473868 NISCHQ9Y2I1 1504 aa31.78■■■□□ 2.68
SNX7-203ENST00000473868 CCDC180Q9P1Z9 1646 aa28.28■■■□□ 2.12
SNX7-203ENST00000473868 ABCC9O60706 1549 aa28.01■■■□□ 2.07
SNX7-203ENST00000473868 RB1CC1Q8TDY2 1594 aa26.77■■□□□ 1.88
SNX7-203ENST00000473868 NACADO15069 1562 aa26.71■■□□□ 1.87
SNX7-203ENST00000473868 DCAF8L2P0C7V8 631 aa26.65■■□□□ 1.86
SNX7-203ENST00000473868 MYO15BQ96JP2 1530 aa26.52■■□□□ 1.84
SNX7-203ENST00000473868 ZCCHC6Q5VYS8 1495 aaKnown RBP26.39■■□□□ 1.82
SNX7-203ENST00000473868 DCAF1Q9Y4B6 1507 aa26.29■■□□□ 1.8
SNX7-203ENST00000473868 PABPN1Q86U42 306 aaKnown RBP eCLIP26.19■■□□□ 1.78
SNX7-203ENST00000473868 UNC13AQ9UPW8 1703 aa26.14■■□□□ 1.78
SNX7-203ENST00000473868 DNAJC5BQ9UF47 199 aa26.13■■□□□ 1.77
SNX7-203ENST00000473868 BICRAQ9NZM4 1560 aa26.06■■□□□ 1.76
SNX7-203ENST00000473868 SCRIBQ14160 1630 aa25.77■■□□□ 1.72
SNX7-203ENST00000473868 SHROOM4Q9ULL8 1493 aa25.7■■□□□ 1.7
SNX7-203ENST00000473868 EIF4G1Q04637 1599 aaKnown RBP25.35■■□□□ 1.65
SNX7-203ENST00000473868 CC2D2AQ9P2K1 1620 aa25.3■■□□□ 1.64
SNX7-203ENST00000473868 CECR2Q9BXF3 1484 aa25.2■■□□□ 1.62
SNX7-203ENST00000473868 NCAPD3P42695 1498 aa24.73■■□□□ 1.55
SNX7-203ENST00000473868 ATAD2BQ9ULI0 1458 aa24.68■■□□□ 1.54
SNX7-203ENST00000473868 SMARCA4P51532 1647 aa24.67■■□□□ 1.54
SNX7-203ENST00000473868 BAZ1AQ9NRL2 1556 aaPredicted RBP24.6■■□□□ 1.53
SNX7-203ENST00000473868 SMARCA2P51531 1590 aa24.55■■□□□ 1.52
SNX7-203ENST00000473868 MROH2BQ7Z745 1585 aa24.5■■□□□ 1.51
SNX7-203ENST00000473868 HMGXB3Q12766 1538 aa24.49■■□□□ 1.51
SNX7-203ENST00000473868 PEG3Q9GZU2 1588 aa24.48■■□□□ 1.51
SNX7-203ENST00000473868 BAZ1BQ9UIG0 1483 aaKnown RBP24.38■■□□□ 1.49
SNX7-203ENST00000473868 NESP48681 1621 aa24.18■■□□□ 1.46
SNX7-203ENST00000473868 WIZO95785 1651 aa24.16■■□□□ 1.46
SNX7-203ENST00000473868 RSF1Q96T23 1441 aaPredicted RBP24.15■■□□□ 1.46
SNX7-203ENST00000473868 ERCC6Q03468 1493 aa24.09■■□□□ 1.45
SNX7-203ENST00000473868 LAMC3Q9Y6N6 1575 aa24.03■■□□□ 1.44
SNX7-203ENST00000473868 CUX2O14529 1486 aa24■■□□□ 1.43
SNX7-203ENST00000473868 CADPSQ9ULU8 1353 aa23.98■■□□□ 1.43
SNX7-203ENST00000473868 PDS5BQ9NTI5 1447 aa23.9■■□□□ 1.42
SNX7-203ENST00000473868 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.41
SNX7-203ENST00000473868 THOC2Q8NI27 1593 aaKnown RBP23.82■■□□□ 1.4
SNX7-203ENST00000473868 KIF21AQ7Z4S6 1674 aa23.79■■□□□ 1.4
SNX7-203ENST00000473868 CFTRP13569 1480 aa23.77■■□□□ 1.4
SNX7-203ENST00000473868 DNAJC5Q9H3Z4 198 aa23.71■■□□□ 1.39
SNX7-203ENST00000473868 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
SNX7-203ENST00000473868 MRC2Q9UBG0 1479 aa23.66■■□□□ 1.38
SNX7-203ENST00000473868 FANCD2Q9BXW9 1451 aa23.65■■□□□ 1.38
SNX7-203ENST00000473868 CEP164Q9UPV0 1460 aa23.61■■□□□ 1.37
SNX7-203ENST00000473868 WDR62O43379 1518 aa23.6■■□□□ 1.37
SNX7-203ENST00000473868 URB2Q14146 1524 aaKnown RBP23.46■■□□□ 1.35
SNX7-203ENST00000473868 PRDM2Q13029 1718 aa23.39■■□□□ 1.34
SNX7-203ENST00000473868 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
SNX7-203ENST00000473868 TOPBP1Q92547 1522 aa23.25■■□□□ 1.31
SNX7-203ENST00000473868 ABCC8Q09428 1581 aa23.22■■□□□ 1.31
SNX7-203ENST00000473868 IFT140Q96RY7 1462 aa23.17■■□□□ 1.3
SNX7-203ENST00000473868 DNMBPQ6XZF7 1577 aa23.16■■□□□ 1.3
SNX7-203ENST00000473868 ZNF608Q9ULD9 1512 aaPredicted RBP23.12■■□□□ 1.29
SNX7-203ENST00000473868 POLA1P09884 1462 aaPredicted RBP23.04■■□□□ 1.28
SNX7-203ENST00000473868 TARBP1Q13395 1621 aaKnown RBP23.02■■□□□ 1.28
SNX7-203ENST00000473868 OSCARQ8IYS5 282 aa23.02■■□□□ 1.28
SNX7-203ENST00000473868 CUX1P39880 1505 aa22.98■■□□□ 1.27
SNX7-203ENST00000473868 SOGA1O94964 1423 aa22.96■■□□□ 1.27
SNX7-203ENST00000473868 AQRO60306 1485 aaKnown RBP eCLIP22.96■■□□□ 1.27
SNX7-203ENST00000473868 RAD54L2Q9Y4B4 1467 aa22.96■■□□□ 1.27
SNX7-203ENST00000473868 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
SNX7-203ENST00000473868 FGD5Q6ZNL6 1462 aa22.92■■□□□ 1.26
SNX7-203ENST00000473868 TDRD9Q8NDG6 1382 aaKnown RBP22.88■■□□□ 1.25
SNX7-203ENST00000473868 WDR97A6NE52 1622 aa22.76■■□□□ 1.23
SNX7-203ENST00000473868 WRNQ14191 1432 aaPredicted RBP eCLIP22.72■■□□□ 1.23
SNX7-203ENST00000473868 ABCA10Q8WWZ4 1543 aa22.72■■□□□ 1.23
SNX7-203ENST00000473868 GRIN2BQ13224 1484 aa22.69■■□□□ 1.22
SNX7-203ENST00000473868 FBLN2P98095 1184 aa22.69■■□□□ 1.22
SNX7-203ENST00000473868 TRIM41Q8WV44 630 aa22.69■■□□□ 1.22
SNX7-203ENST00000473868 SNAPC4Q5SXM2 1469 aa22.68■■□□□ 1.22
SNX7-203ENST00000473868 TOP2BQ02880 1626 aa22.68■■□□□ 1.22
SNX7-203ENST00000473868 GAPVD1Q14C86 1478 aa22.66■■□□□ 1.22
SNX7-203ENST00000473868 CHD1O14646 1710 aa22.66■■□□□ 1.22
SNX7-203ENST00000473868 SYNJ1O43426 1573 aa22.66■■□□□ 1.22
SNX7-203ENST00000473868 BIVM-ERCC5R4GMW8 1640 aa22.65■■□□□ 1.22
SNX7-203ENST00000473868 MAGI1Q96QZ7 1491 aaPredicted RBP22.65■■□□□ 1.22
SNX7-203ENST00000473868 CHMP7Q8WUX9 453 aaPredicted RBP22.61■■□□□ 1.21
SNX7-203ENST00000473868 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
SNX7-203ENST00000473868 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
SNX7-203ENST00000473868 ABCA5Q8WWZ7 1642 aa22.6■■□□□ 1.21
SNX7-203ENST00000473868 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
SNX7-203ENST00000473868 ARHGEF11O15085 1522 aa22.58■■□□□ 1.21
SNX7-203ENST00000473868 SYNJ2O15056 1496 aa22.58■■□□□ 1.2
SNX7-203ENST00000473868 PBRM1Q86U86 1689 aa22.52■■□□□ 1.2
SNX7-203ENST00000473868 CLASP1Q7Z460 1538 aa22.5■■□□□ 1.19
SNX7-203ENST00000473868 CYB5RLQ6IPT4 315 aa22.45■■□□□ 1.18
SNX7-203ENST00000473868 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
SNX7-203ENST00000473868 ARAP1Q96P48 1450 aa22.41■■□□□ 1.18
SNX7-203ENST00000473868 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
SNX7-203ENST00000473868 GRIN2AQ12879 1464 aa22.4■■□□□ 1.18
SNX7-203ENST00000473868 ADAMTS12P58397 1594 aa22.38■■□□□ 1.17
SNX7-203ENST00000473868 NUP160Q12769 1436 aa22.35■■□□□ 1.17
SNX7-203ENST00000473868 IGF1RP08069 1367 aa22.3■■□□□ 1.16
SNX7-203ENST00000473868 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
SNX7-203ENST00000473868 KIF27Q86VH2 1401 aa22.26■■□□□ 1.15
SNX7-203ENST00000473868 ERCC6L2Q5T890 1561 aa22.18■■□□□ 1.14
SNX7-203ENST00000473868 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
SNX7-203ENST00000473868 JPH4Q96JJ6 628 aa22.16■■□□□ 1.14
SNX7-203ENST00000473868 CARMIL1Q5VZK9 1371 aa22.11■■□□□ 1.13
SNX7-203ENST00000473868 CUL7Q14999 1698 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms