RNA–Protein interactions for RNA: ENST00000473791.1

CDK5RAP1-209, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 2

Gene CDK5RAP1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-209ENST00000473791 NISCHQ9Y2I1 1504 aa37.07■■■■□ 3.53
CDK5RAP1-209ENST00000473791 CCDC180Q9P1Z9 1646 aa33.06■■■□□ 2.88
CDK5RAP1-209ENST00000473791 ABCC9O60706 1549 aa32.19■■■□□ 2.74
CDK5RAP1-209ENST00000473791 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
CDK5RAP1-209ENST00000473791 NACADO15069 1562 aa31■■■□□ 2.55
CDK5RAP1-209ENST00000473791 ZCCHC6Q5VYS8 1495 aaKnown RBP30.91■■■□□ 2.54
CDK5RAP1-209ENST00000473791 MYO15BQ96JP2 1530 aa30.83■■■□□ 2.53
CDK5RAP1-209ENST00000473791 DCAF8L2P0C7V8 631 aa30.8■■■□□ 2.52
CDK5RAP1-209ENST00000473791 DCAF1Q9Y4B6 1507 aa30.7■■■□□ 2.51
CDK5RAP1-209ENST00000473791 UNC13AQ9UPW8 1703 aa30.44■■■□□ 2.46
CDK5RAP1-209ENST00000473791 SCRIBQ14160 1630 aa30.11■■■□□ 2.41
CDK5RAP1-209ENST00000473791 BICRAQ9NZM4 1560 aa30.1■■■□□ 2.41
CDK5RAP1-209ENST00000473791 PABPN1Q86U42 306 aaKnown RBP eCLIP29.99■■■□□ 2.39
CDK5RAP1-209ENST00000473791 SHROOM4Q9ULL8 1493 aa29.81■■■□□ 2.36
CDK5RAP1-209ENST00000473791 DNAJC5BQ9UF47 199 aa29.43■■■□□ 2.3
CDK5RAP1-209ENST00000473791 EIF4G1Q04637 1599 aaKnown RBP29.3■■■□□ 2.28
CDK5RAP1-209ENST00000473791 CC2D2AQ9P2K1 1620 aa29.18■■■□□ 2.26
CDK5RAP1-209ENST00000473791 CECR2Q9BXF3 1484 aa28.92■■■□□ 2.22
CDK5RAP1-209ENST00000473791 SMARCA4P51532 1647 aa28.81■■■□□ 2.2
CDK5RAP1-209ENST00000473791 BAZ1AQ9NRL2 1556 aaPredicted RBP28.75■■■□□ 2.19
CDK5RAP1-209ENST00000473791 SMARCA2P51531 1590 aa28.59■■■□□ 2.17
CDK5RAP1-209ENST00000473791 ATAD2BQ9ULI0 1458 aa28.58■■■□□ 2.17
CDK5RAP1-209ENST00000473791 MROH2BQ7Z745 1585 aa28.56■■■□□ 2.16
CDK5RAP1-209ENST00000473791 NCAPD3P42695 1498 aa28.55■■■□□ 2.16
CDK5RAP1-209ENST00000473791 PEG3Q9GZU2 1588 aa28.53■■■□□ 2.16
CDK5RAP1-209ENST00000473791 HMGXB3Q12766 1538 aa28.49■■■□□ 2.15
CDK5RAP1-209ENST00000473791 BAZ1BQ9UIG0 1483 aaKnown RBP28.37■■■□□ 2.13
CDK5RAP1-209ENST00000473791 WIZO95785 1651 aa28.3■■■□□ 2.12
CDK5RAP1-209ENST00000473791 RSF1Q96T23 1441 aaPredicted RBP28.2■■■□□ 2.11
CDK5RAP1-209ENST00000473791 TOP2AP11388 1531 aaKnown RBP28■■■□□ 2.07
CDK5RAP1-209ENST00000473791 NESP48681 1621 aa27.87■■■□□ 2.05
CDK5RAP1-209ENST00000473791 LAMC3Q9Y6N6 1575 aa27.86■■■□□ 2.05
CDK5RAP1-209ENST00000473791 ERCC6Q03468 1493 aa27.76■■■□□ 2.03
CDK5RAP1-209ENST00000473791 CADPSQ9ULU8 1353 aa27.69■■■□□ 2.02
CDK5RAP1-209ENST00000473791 KIF21AQ7Z4S6 1674 aa27.65■■■□□ 2.02
CDK5RAP1-209ENST00000473791 PDS5BQ9NTI5 1447 aa27.6■■■□□ 2.01
CDK5RAP1-209ENST00000473791 CCDC88BA6NC98 1476 aa27.6■■■□□ 2.01
CDK5RAP1-209ENST00000473791 CFTRP13569 1480 aa27.57■■■□□ 2
CDK5RAP1-209ENST00000473791 PRDM2Q13029 1718 aa27.55■■■□□ 2
CDK5RAP1-209ENST00000473791 THOC2Q8NI27 1593 aaKnown RBP27.54■■■□□ 2
CDK5RAP1-209ENST00000473791 CUX2O14529 1486 aa27.48■■□□□ 1.99
CDK5RAP1-209ENST00000473791 SUPT5HO00267 1087 aaKnown RBP27.42■■□□□ 1.98
CDK5RAP1-209ENST00000473791 FANCD2Q9BXW9 1451 aa27.42■■□□□ 1.98
CDK5RAP1-209ENST00000473791 CEP164Q9UPV0 1460 aa27.41■■□□□ 1.98
CDK5RAP1-209ENST00000473791 MRC2Q9UBG0 1479 aa27.36■■□□□ 1.97
CDK5RAP1-209ENST00000473791 WDR62O43379 1518 aa27.3■■□□□ 1.96
CDK5RAP1-209ENST00000473791 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
CDK5RAP1-209ENST00000473791 DNMBPQ6XZF7 1577 aa27.01■■□□□ 1.91
CDK5RAP1-209ENST00000473791 TOPBP1Q92547 1522 aa27■■□□□ 1.91
CDK5RAP1-209ENST00000473791 ABCC8Q09428 1581 aa26.99■■□□□ 1.91
CDK5RAP1-209ENST00000473791 IFT140Q96RY7 1462 aa26.81■■□□□ 1.88
CDK5RAP1-209ENST00000473791 CUX1P39880 1505 aa26.8■■□□□ 1.88
CDK5RAP1-209ENST00000473791 POLA1P09884 1462 aaPredicted RBP26.76■■□□□ 1.87
CDK5RAP1-209ENST00000473791 TARBP1Q13395 1621 aaKnown RBP26.74■■□□□ 1.87
CDK5RAP1-209ENST00000473791 FGD5Q6ZNL6 1462 aa26.71■■□□□ 1.87
CDK5RAP1-209ENST00000473791 ZNF608Q9ULD9 1512 aaPredicted RBP26.68■■□□□ 1.86
CDK5RAP1-209ENST00000473791 EIF4G3O43432 1585 aaKnown RBP26.67■■□□□ 1.86
CDK5RAP1-209ENST00000473791 BIVM-ERCC5R4GMW8 1640 aa26.65■■□□□ 1.86
CDK5RAP1-209ENST00000473791 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
CDK5RAP1-209ENST00000473791 TOP2BQ02880 1626 aa26.61■■□□□ 1.85
CDK5RAP1-209ENST00000473791 WRNQ14191 1432 aaPredicted RBP eCLIP26.61■■□□□ 1.85
CDK5RAP1-209ENST00000473791 SYNJ1O43426 1573 aa26.6■■□□□ 1.85
CDK5RAP1-209ENST00000473791 SOGA1O94964 1423 aa26.6■■□□□ 1.85
CDK5RAP1-209ENST00000473791 WDR97A6NE52 1622 aa26.6■■□□□ 1.85
CDK5RAP1-209ENST00000473791 DNAJC5Q9H3Z4 198 aa26.5■■□□□ 1.83
CDK5RAP1-209ENST00000473791 AQRO60306 1485 aaKnown RBP eCLIP26.49■■□□□ 1.833e-11■■□□□ 12.5
CDK5RAP1-209ENST00000473791 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.83
CDK5RAP1-209ENST00000473791 TDRD9Q8NDG6 1382 aaKnown RBP26.43■■□□□ 1.82
CDK5RAP1-209ENST00000473791 ABCA5Q8WWZ7 1642 aa26.41■■□□□ 1.82
CDK5RAP1-209ENST00000473791 PBRM1Q86U86 1689 aa26.41■■□□□ 1.82
CDK5RAP1-209ENST00000473791 CHD1O14646 1710 aa26.36■■□□□ 1.81
CDK5RAP1-209ENST00000473791 GRIN2BQ13224 1484 aa26.33■■□□□ 1.81
CDK5RAP1-209ENST00000473791 GAPVD1Q14C86 1478 aa26.33■■□□□ 1.81
CDK5RAP1-209ENST00000473791 SNAPC4Q5SXM2 1469 aa26.31■■□□□ 1.8
CDK5RAP1-209ENST00000473791 MAGI1Q96QZ7 1491 aaPredicted RBP26.29■■□□□ 1.8
CDK5RAP1-209ENST00000473791 OSCARQ8IYS5 282 aa26.23■■□□□ 1.79
CDK5RAP1-209ENST00000473791 SYNJ2O15056 1496 aa26.17■■□□□ 1.78
CDK5RAP1-209ENST00000473791 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
CDK5RAP1-209ENST00000473791 ERICH3Q5RHP9 1530 aa26.15■■□□□ 1.78
CDK5RAP1-209ENST00000473791 FBLN2P98095 1184 aa26.12■■□□□ 1.77
CDK5RAP1-209ENST00000473791 CHMP7Q8WUX9 453 aaPredicted RBP26.06■■□□□ 1.76
CDK5RAP1-209ENST00000473791 KIF27Q86VH2 1401 aa26.05■■□□□ 1.76
CDK5RAP1-209ENST00000473791 FHAD1B1AJZ9 1412 aa26.02■■□□□ 1.76
CDK5RAP1-209ENST00000473791 GRIN2AQ12879 1464 aa26.01■■□□□ 1.75
CDK5RAP1-209ENST00000473791 CLASP1Q7Z460 1538 aa26.01■■□□□ 1.75
CDK5RAP1-209ENST00000473791 CUL7Q14999 1698 aa25.98■■□□□ 1.75
CDK5RAP1-209ENST00000473791 RIMBP3CA6NJZ7 1639 aa25.96■■□□□ 1.75
CDK5RAP1-209ENST00000473791 RIMBP3BA6NNM3 1639 aa25.96■■□□□ 1.75
CDK5RAP1-209ENST00000473791 RIMBP3Q9UFD9 1639 aa25.96■■□□□ 1.75
CDK5RAP1-209ENST00000473791 ARHGEF11O15085 1522 aa25.92■■□□□ 1.74
CDK5RAP1-209ENST00000473791 CEP170Q5SW79 1584 aa25.91■■□□□ 1.74
CDK5RAP1-209ENST00000473791 TRIM41Q8WV44 630 aa25.91■■□□□ 1.74
CDK5RAP1-209ENST00000473791 IGF1RP08069 1367 aa25.89■■□□□ 1.74
CDK5RAP1-209ENST00000473791 NUP160Q12769 1436 aa25.88■■□□□ 1.73
CDK5RAP1-209ENST00000473791 RUSC2Q8N2Y8 1516 aa25.8■■□□□ 1.72
CDK5RAP1-209ENST00000473791 SHROOM2Q13796 1616 aa25.76■■□□□ 1.71
CDK5RAP1-209ENST00000473791 CARMIL1Q5VZK9 1371 aa25.75■■□□□ 1.71
CDK5RAP1-209ENST00000473791 ARAP1Q96P48 1450 aa25.71■■□□□ 1.71
CDK5RAP1-209ENST00000473791 RAPGEF2Q9Y4G8 1499 aa25.65■■□□□ 1.7
CDK5RAP1-209ENST00000473791 ERCC6L2Q5T890 1561 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms