RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 NISCHQ9Y2I1 1504 aa27.47■■□□□ 1.99
SSBP1-209ENST00000473783 ABCC9O60706 1549 aa25.67■■□□□ 1.7
SSBP1-209ENST00000473783 CCDC180Q9P1Z9 1646 aa25.07■■□□□ 1.6
SSBP1-209ENST00000473783 DNAJC5BQ9UF47 199 aa24.69■■□□□ 1.54
SSBP1-209ENST00000473783 RB1CC1Q8TDY2 1594 aa24.19■■□□□ 1.46
SSBP1-209ENST00000473783 NACADO15069 1562 aa23.84■■□□□ 1.41
SSBP1-209ENST00000473783 PABPN1Q86U42 306 aaKnown RBP eCLIP23.72■■□□□ 1.39
SSBP1-209ENST00000473783 UNC13AQ9UPW8 1703 aa23.66■■□□□ 1.38
SSBP1-209ENST00000473783 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
SSBP1-209ENST00000473783 DCAF8L2P0C7V8 631 aa23.38■■□□□ 1.33
SSBP1-209ENST00000473783 MYO15BQ96JP2 1530 aa23.3■■□□□ 1.32
SSBP1-209ENST00000473783 DNAJC5Q9H3Z4 198 aa23.29■■□□□ 1.32
SSBP1-209ENST00000473783 CECR2Q9BXF3 1484 aa23.23■■□□□ 1.31
SSBP1-209ENST00000473783 CC2D2AQ9P2K1 1620 aa23.2■■□□□ 1.3
SSBP1-209ENST00000473783 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
SSBP1-209ENST00000473783 EIF4G1Q04637 1599 aaKnown RBP22.97■■□□□ 1.27
SSBP1-209ENST00000473783 DCAF1Q9Y4B6 1507 aa22.71■■□□□ 1.23
SSBP1-209ENST00000473783 SCRIBQ14160 1630 aa22.7■■□□□ 1.22
SSBP1-209ENST00000473783 ZCCHC6Q5VYS8 1495 aaKnown RBP22.62■■□□□ 1.21
SSBP1-209ENST00000473783 CUX2O14529 1486 aa22.52■■□□□ 1.2
SSBP1-209ENST00000473783 ERCC6Q03468 1493 aa22.25■■□□□ 1.15
SSBP1-209ENST00000473783 NCAPD3P42695 1498 aa21.99■■□□□ 1.11
SSBP1-209ENST00000473783 TRIM41Q8WV44 630 aa21.89■■□□□ 1.09
SSBP1-209ENST00000473783 THOC2Q8NI27 1593 aaKnown RBP21.84■■□□□ 1.09
SSBP1-209ENST00000473783 NESP48681 1621 aa21.84■■□□□ 1.09
SSBP1-209ENST00000473783 HMGXB3Q12766 1538 aa21.8■■□□□ 1.08
SSBP1-209ENST00000473783 ATAD2BQ9ULI0 1458 aa21.79■■□□□ 1.08
SSBP1-209ENST00000473783 SMARCA2P51531 1590 aa21.74■■□□□ 1.07
SSBP1-209ENST00000473783 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
SSBP1-209ENST00000473783 SMARCA4P51532 1647 aa21.62■■□□□ 1.05
SSBP1-209ENST00000473783 KIF21AQ7Z4S6 1674 aa21.6■■□□□ 1.05
SSBP1-209ENST00000473783 BAZ1BQ9UIG0 1483 aaKnown RBP21.55■■□□□ 1.04
SSBP1-209ENST00000473783 PDS5BQ9NTI5 1447 aa21.51■■□□□ 1.03
SSBP1-209ENST00000473783 PEG3Q9GZU2 1588 aa21.44■■□□□ 1.02
SSBP1-209ENST00000473783 BAZ1AQ9NRL2 1556 aaPredicted RBP21.42■■□□□ 1.02
SSBP1-209ENST00000473783 MRC2Q9UBG0 1479 aa21.38■■□□□ 1.01
SSBP1-209ENST00000473783 WDR62O43379 1518 aa21.37■■□□□ 1.01
SSBP1-209ENST00000473783 OSCARQ8IYS5 282 aa21.28■■□□□ 1
SSBP1-209ENST00000473783 CADPSQ9ULU8 1353 aa21.25■□□□□ 0.99
SSBP1-209ENST00000473783 RIMBP3CA6NJZ7 1639 aa21.14■□□□□ 0.97
SSBP1-209ENST00000473783 RIMBP3BA6NNM3 1639 aa21.14■□□□□ 0.97
SSBP1-209ENST00000473783 RIMBP3Q9UFD9 1639 aa21.14■□□□□ 0.97
SSBP1-209ENST00000473783 MROH2BQ7Z745 1585 aa21.14■□□□□ 0.97
SSBP1-209ENST00000473783 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
SSBP1-209ENST00000473783 FANCD2Q9BXW9 1451 aa21.03■□□□□ 0.96
SSBP1-209ENST00000473783 ARHGEF11O15085 1522 aa20.99■□□□□ 0.95
SSBP1-209ENST00000473783 URB2Q14146 1524 aaKnown RBP20.89■□□□□ 0.94
SSBP1-209ENST00000473783 CFTRP13569 1480 aa20.88■□□□□ 0.93
SSBP1-209ENST00000473783 WIZO95785 1651 aa20.86■□□□□ 0.93
SSBP1-209ENST00000473783 TRHP20396 242 aaPredicted RBP20.81■□□□□ 0.92
SSBP1-209ENST00000473783 CYB5RLQ6IPT4 315 aa20.8■□□□□ 0.92
SSBP1-209ENST00000473783 AEBP2Q6ZN18 517 aaPredicted RBP20.78■□□□□ 0.92
SSBP1-209ENST00000473783 IFT140Q96RY7 1462 aa20.75■□□□□ 0.91
SSBP1-209ENST00000473783 ZNF608Q9ULD9 1512 aaPredicted RBP20.74■□□□□ 0.91
SSBP1-209ENST00000473783 ARAP1Q96P48 1450 aa20.72■□□□□ 0.91
SSBP1-209ENST00000473783 PRDM2Q13029 1718 aa20.7■□□□□ 0.9
SSBP1-209ENST00000473783 CHD1O14646 1710 aa20.65■□□□□ 0.9
SSBP1-209ENST00000473783 EIF4G3O43432 1585 aaKnown RBP20.64■□□□□ 0.9
SSBP1-209ENST00000473783 RSF1Q96T23 1441 aaPredicted RBP20.64■□□□□ 0.89
SSBP1-209ENST00000473783 TOP2AP11388 1531 aaKnown RBP20.57■□□□□ 0.88
SSBP1-209ENST00000473783 TOPBP1Q92547 1522 aa20.55■□□□□ 0.88
SSBP1-209ENST00000473783 ABCC8Q09428 1581 aa20.5■□□□□ 0.87
SSBP1-209ENST00000473783 TARBP1Q13395 1621 aaKnown RBP20.45■□□□□ 0.87
SSBP1-209ENST00000473783 AQRO60306 1485 aaKnown RBP eCLIP20.44■□□□□ 0.86
SSBP1-209ENST00000473783 DNMBPQ6XZF7 1577 aa20.43■□□□□ 0.86
SSBP1-209ENST00000473783 FBLN2P98095 1184 aa20.43■□□□□ 0.86
SSBP1-209ENST00000473783 CLASP1Q7Z460 1538 aa20.38■□□□□ 0.85
SSBP1-209ENST00000473783 SYNJ1O43426 1573 aa20.31■□□□□ 0.84
SSBP1-209ENST00000473783 CCDC88BA6NC98 1476 aa20.29■□□□□ 0.84
SSBP1-209ENST00000473783 POLA1P09884 1462 aaPredicted RBP20.29■□□□□ 0.84
SSBP1-209ENST00000473783 WDR97A6NE52 1622 aa20.25■□□□□ 0.83
SSBP1-209ENST00000473783 SNAPC4Q5SXM2 1469 aa20.24■□□□□ 0.83
SSBP1-209ENST00000473783 MAGI1Q96QZ7 1491 aaPredicted RBP20.21■□□□□ 0.83
SSBP1-209ENST00000473783 GAPVD1Q14C86 1478 aa20.19■□□□□ 0.82
SSBP1-209ENST00000473783 CHMP7Q8WUX9 453 aaPredicted RBP20.19■□□□□ 0.82
SSBP1-209ENST00000473783 TDRD9Q8NDG6 1382 aaKnown RBP20.19■□□□□ 0.82
SSBP1-209ENST00000473783 RAD54L2Q9Y4B4 1467 aa20.18■□□□□ 0.82
SSBP1-209ENST00000473783 SOGA1O94964 1423 aa20.16■□□□□ 0.82
SSBP1-209ENST00000473783 SYNJ2O15056 1496 aa20.13■□□□□ 0.81
SSBP1-209ENST00000473783 GRIN2BQ13224 1484 aa20.11■□□□□ 0.81
SSBP1-209ENST00000473783 FGD5Q6ZNL6 1462 aa20.05■□□□□ 0.8
SSBP1-209ENST00000473783 KIF13AQ9H1H9 1805 aa20.02■□□□□ 0.79
SSBP1-209ENST00000473783 PBRM1Q86U86 1689 aa20.01■□□□□ 0.79
SSBP1-209ENST00000473783 ILDR1Q86SU0 546 aaPredicted RBP19.97■□□□□ 0.79
SSBP1-209ENST00000473783 ERCC6L2Q5T890 1561 aa19.95■□□□□ 0.78
SSBP1-209ENST00000473783 CUX1P39880 1505 aa19.91■□□□□ 0.78
SSBP1-209ENST00000473783 CEP170Q5SW79 1584 aa19.89■□□□□ 0.77
SSBP1-209ENST00000473783 ABCA5Q8WWZ7 1642 aa19.86■□□□□ 0.77
SSBP1-209ENST00000473783 SHROOM2Q13796 1616 aa19.85■□□□□ 0.77
SSBP1-209ENST00000473783 GRIN2AQ12879 1464 aa19.85■□□□□ 0.77
SSBP1-209ENST00000473783 NUP160Q12769 1436 aa19.81■□□□□ 0.76
SSBP1-209ENST00000473783 ABCA10Q8WWZ4 1543 aa19.81■□□□□ 0.76
SSBP1-209ENST00000473783 KDM4FA0A1W2PPD8 638 aa19.8■□□□□ 0.76
SSBP1-209ENST00000473783 ABCC10Q5T3U5 1492 aa19.77■□□□□ 0.76
SSBP1-209ENST00000473783 ADAMTS12P58397 1594 aa19.76■□□□□ 0.75
SSBP1-209ENST00000473783 KDM6BO15054 1643 aa19.74■□□□□ 0.75
SSBP1-209ENST00000473783 FAM69CQ0P6D2 419 aa19.72■□□□□ 0.75
SSBP1-209ENST00000473783 MAPKBP1O60336 1514 aa19.71■□□□□ 0.75
SSBP1-209ENST00000473783 DIP2BQ9P265 1576 aa19.71■□□□□ 0.75
SSBP1-209ENST00000473783 FHAD1B1AJZ9 1412 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms