RNA–Protein interactions for RNA: ENST00000473777.5

RAPGEF3-207, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 726 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-207ENST00000473777 NISCHQ9Y2I1 1504 aa39.87■■■■□ 3.97
RAPGEF3-207ENST00000473777 CCDC180Q9P1Z9 1646 aa35.72■■■■□ 3.31
RAPGEF3-207ENST00000473777 ABCC9O60706 1549 aa35.49■■■■□ 3.27
RAPGEF3-207ENST00000473777 RB1CC1Q8TDY2 1594 aa33.93■■■■□ 3.02
RAPGEF3-207ENST00000473777 NACADO15069 1562 aa33.72■■■□□ 2.99
RAPGEF3-207ENST00000473777 DCAF8L2P0C7V8 631 aa33.7■■■□□ 2.99
RAPGEF3-207ENST00000473777 MYO15BQ96JP2 1530 aa33.3■■■□□ 2.92
RAPGEF3-207ENST00000473777 UNC13AQ9UPW8 1703 aa33.08■■■□□ 2.89
RAPGEF3-207ENST00000473777 PABPN1Q86U42 306 aaKnown RBP eCLIP33.08■■■□□ 2.89
RAPGEF3-207ENST00000473777 ZCCHC6Q5VYS8 1495 aaKnown RBP33.07■■■□□ 2.88
RAPGEF3-207ENST00000473777 DNAJC5BQ9UF47 199 aa33■■■□□ 2.87
RAPGEF3-207ENST00000473777 DCAF1Q9Y4B6 1507 aa32.96■■■□□ 2.87
RAPGEF3-207ENST00000473777 BICRAQ9NZM4 1560 aa32.81■■■□□ 2.84
RAPGEF3-207ENST00000473777 SCRIBQ14160 1630 aa32.55■■■□□ 2.8
RAPGEF3-207ENST00000473777 SHROOM4Q9ULL8 1493 aa32.49■■■□□ 2.79
RAPGEF3-207ENST00000473777 CC2D2AQ9P2K1 1620 aa32.06■■■□□ 2.72
RAPGEF3-207ENST00000473777 EIF4G1Q04637 1599 aaKnown RBP32.04■■■□□ 2.72
RAPGEF3-207ENST00000473777 CECR2Q9BXF3 1484 aa31.96■■■□□ 2.71
RAPGEF3-207ENST00000473777 NCAPD3P42695 1498 aa31.1■■■□□ 2.57
RAPGEF3-207ENST00000473777 SMARCA4P51532 1647 aa31.06■■■□□ 2.56
RAPGEF3-207ENST00000473777 ATAD2BQ9ULI0 1458 aa31.02■■■□□ 2.56
RAPGEF3-207ENST00000473777 SMARCA2P51531 1590 aa31.01■■■□□ 2.56
RAPGEF3-207ENST00000473777 BAZ1AQ9NRL2 1556 aaPredicted RBP30.98■■■□□ 2.55
RAPGEF3-207ENST00000473777 HMGXB3Q12766 1538 aa30.9■■■□□ 2.54
RAPGEF3-207ENST00000473777 BAZ1BQ9UIG0 1483 aaKnown RBP30.79■■■□□ 2.52
RAPGEF3-207ENST00000473777 PEG3Q9GZU2 1588 aa30.74■■■□□ 2.51
RAPGEF3-207ENST00000473777 ERCC6Q03468 1493 aa30.7■■■□□ 2.51
RAPGEF3-207ENST00000473777 MROH2BQ7Z745 1585 aa30.7■■■□□ 2.5
RAPGEF3-207ENST00000473777 CUX2O14529 1486 aa30.53■■■□□ 2.48
RAPGEF3-207ENST00000473777 NESP48681 1621 aa30.51■■■□□ 2.47
RAPGEF3-207ENST00000473777 LAMC3Q9Y6N6 1575 aa30.41■■■□□ 2.46
RAPGEF3-207ENST00000473777 WIZO95785 1651 aa30.36■■■□□ 2.45
RAPGEF3-207ENST00000473777 PDS5BQ9NTI5 1447 aa30.25■■■□□ 2.43
RAPGEF3-207ENST00000473777 DNAJC5Q9H3Z4 198 aa30.25■■■□□ 2.43
RAPGEF3-207ENST00000473777 CADPSQ9ULU8 1353 aa30.19■■■□□ 2.42
RAPGEF3-207ENST00000473777 KIF21AQ7Z4S6 1674 aa30.16■■■□□ 2.42
RAPGEF3-207ENST00000473777 THOC2Q8NI27 1593 aaKnown RBP30.15■■■□□ 2.42
RAPGEF3-207ENST00000473777 RSF1Q96T23 1441 aaPredicted RBP30.15■■■□□ 2.42
RAPGEF3-207ENST00000473777 TOP2AP11388 1531 aaKnown RBP30.01■■■□□ 2.4
RAPGEF3-207ENST00000473777 MRC2Q9UBG0 1479 aa29.93■■■□□ 2.38
RAPGEF3-207ENST00000473777 CEP164Q9UPV0 1460 aa29.88■■■□□ 2.37
RAPGEF3-207ENST00000473777 CFTRP13569 1480 aa29.87■■■□□ 2.37
RAPGEF3-207ENST00000473777 FANCD2Q9BXW9 1451 aa29.85■■■□□ 2.37
RAPGEF3-207ENST00000473777 WDR62O43379 1518 aa29.81■■■□□ 2.36
RAPGEF3-207ENST00000473777 CCDC88BA6NC98 1476 aa29.66■■■□□ 2.34
RAPGEF3-207ENST00000473777 PRDM2Q13029 1718 aa29.63■■■□□ 2.33
RAPGEF3-207ENST00000473777 URB2Q14146 1524 aaKnown RBP29.54■■■□□ 2.32
RAPGEF3-207ENST00000473777 ABCC8Q09428 1581 aa29.32■■■□□ 2.28
RAPGEF3-207ENST00000473777 TOPBP1Q92547 1522 aa29.29■■■□□ 2.28
RAPGEF3-207ENST00000473777 IFT140Q96RY7 1462 aa29.27■■■□□ 2.28
RAPGEF3-207ENST00000473777 OSCARQ8IYS5 282 aa29.22■■■□□ 2.27
RAPGEF3-207ENST00000473777 DNMBPQ6XZF7 1577 aa29.22■■■□□ 2.27
RAPGEF3-207ENST00000473777 ZNF608Q9ULD9 1512 aaPredicted RBP29.13■■■□□ 2.25
RAPGEF3-207ENST00000473777 SUPT5HO00267 1087 aaKnown RBP29.09■■■□□ 2.25
RAPGEF3-207ENST00000473777 TRIM41Q8WV44 630 aa29.07■■■□□ 2.24
RAPGEF3-207ENST00000473777 EIF4G3O43432 1585 aaKnown RBP29.01■■■□□ 2.24
RAPGEF3-207ENST00000473777 POLA1P09884 1462 aaPredicted RBP28.99■■■□□ 2.23
RAPGEF3-207ENST00000473777 TARBP1Q13395 1621 aaKnown RBP28.98■■■□□ 2.23
RAPGEF3-207ENST00000473777 AQRO60306 1485 aaKnown RBP eCLIP28.93■■■□□ 2.22
RAPGEF3-207ENST00000473777 SOGA1O94964 1423 aa28.92■■■□□ 2.22
RAPGEF3-207ENST00000473777 RAD54L2Q9Y4B4 1467 aa28.87■■■□□ 2.21
RAPGEF3-207ENST00000473777 FGD5Q6ZNL6 1462 aa28.85■■■□□ 2.21
RAPGEF3-207ENST00000473777 CUX1P39880 1505 aa28.83■■■□□ 2.21
RAPGEF3-207ENST00000473777 TDRD9Q8NDG6 1382 aaKnown RBP28.81■■■□□ 2.2
RAPGEF3-207ENST00000473777 FBLN2P98095 1184 aa28.81■■■□□ 2.2
RAPGEF3-207ENST00000473777 CHD1O14646 1710 aa28.78■■■□□ 2.2
RAPGEF3-207ENST00000473777 WDR97A6NE52 1622 aa28.78■■■□□ 2.2
RAPGEF3-207ENST00000473777 RIMBP3CA6NJZ7 1639 aa28.74■■■□□ 2.19
RAPGEF3-207ENST00000473777 RIMBP3BA6NNM3 1639 aa28.74■■■□□ 2.19
RAPGEF3-207ENST00000473777 RIMBP3Q9UFD9 1639 aa28.74■■■□□ 2.19
RAPGEF3-207ENST00000473777 ARHGEF11O15085 1522 aa28.67■■■□□ 2.18
RAPGEF3-207ENST00000473777 SNAPC4Q5SXM2 1469 aa28.65■■■□□ 2.18
RAPGEF3-207ENST00000473777 GRIN2BQ13224 1484 aa28.64■■■□□ 2.17
RAPGEF3-207ENST00000473777 CHMP7Q8WUX9 453 aaPredicted RBP28.63■■■□□ 2.17
RAPGEF3-207ENST00000473777 MAGI1Q96QZ7 1491 aaPredicted RBP28.61■■■□□ 2.17
RAPGEF3-207ENST00000473777 GAPVD1Q14C86 1478 aa28.56■■■□□ 2.16
RAPGEF3-207ENST00000473777 ABCA10Q8WWZ4 1543 aa28.54■■■□□ 2.16
RAPGEF3-207ENST00000473777 PBRM1Q86U86 1689 aa28.53■■■□□ 2.16
RAPGEF3-207ENST00000473777 WRNQ14191 1432 aaPredicted RBP eCLIP28.52■■■□□ 2.16
RAPGEF3-207ENST00000473777 CYB5RLQ6IPT4 315 aa28.51■■■□□ 2.15
RAPGEF3-207ENST00000473777 SYNJ2O15056 1496 aa28.51■■■□□ 2.15
RAPGEF3-207ENST00000473777 SYNJ1O43426 1573 aa28.5■■■□□ 2.15
RAPGEF3-207ENST00000473777 TOP2BQ02880 1626 aa28.47■■■□□ 2.15
RAPGEF3-207ENST00000473777 BIVM-ERCC5R4GMW8 1640 aa28.47■■■□□ 2.15
RAPGEF3-207ENST00000473777 ABCA5Q8WWZ7 1642 aa28.46■■■□□ 2.15
RAPGEF3-207ENST00000473777 CLASP1Q7Z460 1538 aa28.41■■■□□ 2.14
RAPGEF3-207ENST00000473777 ARAP1Q96P48 1450 aa28.38■■■□□ 2.13
RAPGEF3-207ENST00000473777 GRIN2AQ12879 1464 aa28.24■■■□□ 2.11
RAPGEF3-207ENST00000473777 ADAMTS12P58397 1594 aa28.24■■■□□ 2.11
RAPGEF3-207ENST00000473777 ERICH3Q5RHP9 1530 aa28.22■■■□□ 2.11
RAPGEF3-207ENST00000473777 FHAD1B1AJZ9 1412 aa28.21■■■□□ 2.11
RAPGEF3-207ENST00000473777 TRHP20396 242 aaPredicted RBP28.19■■■□□ 2.1
RAPGEF3-207ENST00000473777 NUP160Q12769 1436 aa28.11■■■□□ 2.09
RAPGEF3-207ENST00000473777 CEP170Q5SW79 1584 aa28.1■■■□□ 2.09
RAPGEF3-207ENST00000473777 KIF27Q86VH2 1401 aa27.97■■■□□ 2.07
RAPGEF3-207ENST00000473777 SHROOM2Q13796 1616 aa27.96■■■□□ 2.07
RAPGEF3-207ENST00000473777 ERCC6L2Q5T890 1561 aa27.95■■■□□ 2.07
RAPGEF3-207ENST00000473777 JPH4Q96JJ6 628 aa27.9■■■□□ 2.06
RAPGEF3-207ENST00000473777 PRG4Q92954 1404 aaPredicted RBP27.88■■■□□ 2.05
RAPGEF3-207ENST00000473777 CUL7Q14999 1698 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms