RNA–Protein interactions for RNA: ENST00000473667.5

PDZD11-203, Transcript of PDZ domain containing 11, humanhuman

TSL 4

Gene PDZD11, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-203ENST00000473667 NISCHQ9Y2I1 1504 aa25.26■■□□□ 1.63
PDZD11-203ENST00000473667 ABCC9O60706 1549 aa22.87■■□□□ 1.25
PDZD11-203ENST00000473667 CCDC180Q9P1Z9 1646 aa22.71■■□□□ 1.23
PDZD11-203ENST00000473667 RB1CC1Q8TDY2 1594 aa21.7■■□□□ 1.06
PDZD11-203ENST00000473667 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.05
PDZD11-203ENST00000473667 NACADO15069 1562 aa21.52■■□□□ 1.04
PDZD11-203ENST00000473667 DCAF8L2P0C7V8 631 aa21.4■■□□□ 1.02
PDZD11-203ENST00000473667 PABPN1Q86U42 306 aaKnown RBP eCLIP21.27■■□□□ 1
PDZD11-203ENST00000473667 MYO15BQ96JP2 1530 aa21.17■□□□□ 0.98
PDZD11-203ENST00000473667 UNC13AQ9UPW8 1703 aa21.17■□□□□ 0.98
PDZD11-203ENST00000473667 BICRAQ9NZM4 1560 aa21.06■□□□□ 0.96
PDZD11-203ENST00000473667 ZCCHC6Q5VYS8 1495 aaKnown RBP20.9■□□□□ 0.94
PDZD11-203ENST00000473667 DCAF1Q9Y4B6 1507 aa20.85■□□□□ 0.93
PDZD11-203ENST00000473667 SHROOM4Q9ULL8 1493 aa20.77■□□□□ 0.92
PDZD11-203ENST00000473667 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
PDZD11-203ENST00000473667 CC2D2AQ9P2K1 1620 aa20.64■□□□□ 0.9
PDZD11-203ENST00000473667 CECR2Q9BXF3 1484 aa20.62■□□□□ 0.89
PDZD11-203ENST00000473667 EIF4G1Q04637 1599 aaKnown RBP20.57■□□□□ 0.88
PDZD11-203ENST00000473667 DNAJC5Q9H3Z4 198 aa19.93■□□□□ 0.78
PDZD11-203ENST00000473667 NCAPD3P42695 1498 aa19.87■□□□□ 0.77
PDZD11-203ENST00000473667 ATAD2BQ9ULI0 1458 aa19.79■□□□□ 0.76
PDZD11-203ENST00000473667 CUX2O14529 1486 aa19.77■□□□□ 0.76
PDZD11-203ENST00000473667 ERCC6Q03468 1493 aa19.76■□□□□ 0.75
PDZD11-203ENST00000473667 SMARCA4P51532 1647 aa19.73■□□□□ 0.75
PDZD11-203ENST00000473667 SMARCA2P51531 1590 aa19.72■□□□□ 0.75
PDZD11-203ENST00000473667 HMGXB3Q12766 1538 aa19.7■□□□□ 0.74
PDZD11-203ENST00000473667 BAZ1AQ9NRL2 1556 aaPredicted RBP19.61■□□□□ 0.73
PDZD11-203ENST00000473667 NESP48681 1621 aa19.6■□□□□ 0.73
PDZD11-203ENST00000473667 BAZ1BQ9UIG0 1483 aaKnown RBP19.59■□□□□ 0.73
PDZD11-203ENST00000473667 PEG3Q9GZU2 1588 aa19.53■□□□□ 0.72
PDZD11-203ENST00000473667 MROH2BQ7Z745 1585 aa19.46■□□□□ 0.71
PDZD11-203ENST00000473667 LAMC3Q9Y6N6 1575 aa19.44■□□□□ 0.7
PDZD11-203ENST00000473667 THOC2Q8NI27 1593 aaKnown RBP19.42■□□□□ 0.7
PDZD11-203ENST00000473667 PDS5BQ9NTI5 1447 aa19.34■□□□□ 0.69
PDZD11-203ENST00000473667 KIF21AQ7Z4S6 1674 aa19.32■□□□□ 0.68
PDZD11-203ENST00000473667 CADPSQ9ULU8 1353 aa19.26■□□□□ 0.67
PDZD11-203ENST00000473667 WIZO95785 1651 aa19.21■□□□□ 0.67
PDZD11-203ENST00000473667 MRC2Q9UBG0 1479 aa19.18■□□□□ 0.66
PDZD11-203ENST00000473667 WDR62O43379 1518 aa19.14■□□□□ 0.65
PDZD11-203ENST00000473667 CEP164Q9UPV0 1460 aa19.08■□□□□ 0.64
PDZD11-203ENST00000473667 FANCD2Q9BXW9 1451 aa19.04■□□□□ 0.64
PDZD11-203ENST00000473667 CFTRP13569 1480 aa19.01■□□□□ 0.63
PDZD11-203ENST00000473667 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
PDZD11-203ENST00000473667 TRIM41Q8WV44 630 aa19■□□□□ 0.63
PDZD11-203ENST00000473667 TOP2AP11388 1531 aaKnown RBP18.97■□□□□ 0.63
PDZD11-203ENST00000473667 URB2Q14146 1524 aaKnown RBP18.89■□□□□ 0.61
PDZD11-203ENST00000473667 OSCARQ8IYS5 282 aa18.85■□□□□ 0.61
PDZD11-203ENST00000473667 PRDM2Q13029 1718 aa18.77■□□□□ 0.59
PDZD11-203ENST00000473667 CCDC88BA6NC98 1476 aa18.76■□□□□ 0.59
PDZD11-203ENST00000473667 IFT140Q96RY7 1462 aa18.71■□□□□ 0.59
PDZD11-203ENST00000473667 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
PDZD11-203ENST00000473667 TOPBP1Q92547 1522 aa18.66■□□□□ 0.58
PDZD11-203ENST00000473667 ABCC8Q09428 1581 aa18.62■□□□□ 0.57
PDZD11-203ENST00000473667 RIMBP3CA6NJZ7 1639 aa18.61■□□□□ 0.57
PDZD11-203ENST00000473667 RIMBP3BA6NNM3 1639 aa18.61■□□□□ 0.57
PDZD11-203ENST00000473667 RIMBP3Q9UFD9 1639 aa18.61■□□□□ 0.57
PDZD11-203ENST00000473667 DNMBPQ6XZF7 1577 aa18.58■□□□□ 0.56
PDZD11-203ENST00000473667 EIF4G3O43432 1585 aaKnown RBP18.57■□□□□ 0.56
PDZD11-203ENST00000473667 ARHGEF11O15085 1522 aa18.54■□□□□ 0.56
PDZD11-203ENST00000473667 TARBP1Q13395 1621 aaKnown RBP18.5■□□□□ 0.55
PDZD11-203ENST00000473667 AQRO60306 1485 aaKnown RBP eCLIP18.5■□□□□ 0.55
PDZD11-203ENST00000473667 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.55
PDZD11-203ENST00000473667 CHD1O14646 1710 aa18.44■□□□□ 0.54
PDZD11-203ENST00000473667 CYB5RLQ6IPT4 315 aa18.43■□□□□ 0.54
PDZD11-203ENST00000473667 FBLN2P98095 1184 aa18.42■□□□□ 0.54
PDZD11-203ENST00000473667 RAD54L2Q9Y4B4 1467 aa18.4■□□□□ 0.54
PDZD11-203ENST00000473667 SOGA1O94964 1423 aa18.4■□□□□ 0.54
PDZD11-203ENST00000473667 TDRD9Q8NDG6 1382 aaKnown RBP18.37■□□□□ 0.53
PDZD11-203ENST00000473667 ARAP1Q96P48 1450 aa18.34■□□□□ 0.53
PDZD11-203ENST00000473667 FGD5Q6ZNL6 1462 aa18.33■□□□□ 0.53
PDZD11-203ENST00000473667 SNAPC4Q5SXM2 1469 aa18.31■□□□□ 0.52
PDZD11-203ENST00000473667 WDR97A6NE52 1622 aa18.31■□□□□ 0.52
PDZD11-203ENST00000473667 CUX1P39880 1505 aa18.28■□□□□ 0.52
PDZD11-203ENST00000473667 TRHP20396 242 aaPredicted RBP18.28■□□□□ 0.52
PDZD11-203ENST00000473667 CHMP7Q8WUX9 453 aaPredicted RBP18.26■□□□□ 0.51
PDZD11-203ENST00000473667 CLASP1Q7Z460 1538 aa18.25■□□□□ 0.51
PDZD11-203ENST00000473667 MAGI1Q96QZ7 1491 aaPredicted RBP18.25■□□□□ 0.51
PDZD11-203ENST00000473667 GRIN2BQ13224 1484 aa18.24■□□□□ 0.51
PDZD11-203ENST00000473667 SYNJ1O43426 1573 aa18.23■□□□□ 0.51
PDZD11-203ENST00000473667 SYNJ2O15056 1496 aa18.2■□□□□ 0.5
PDZD11-203ENST00000473667 GAPVD1Q14C86 1478 aa18.15■□□□□ 0.5
PDZD11-203ENST00000473667 PBRM1Q86U86 1689 aa18.14■□□□□ 0.49
PDZD11-203ENST00000473667 ABCA10Q8WWZ4 1543 aa18.12■□□□□ 0.49
PDZD11-203ENST00000473667 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
PDZD11-203ENST00000473667 SUPT5HO00267 1087 aaKnown RBP18.08■□□□□ 0.48
PDZD11-203ENST00000473667 WRNQ14191 1432 aaPredicted RBP eCLIP18.02■□□□□ 0.48
PDZD11-203ENST00000473667 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
PDZD11-203ENST00000473667 ADAMTS12P58397 1594 aa17.97■□□□□ 0.47
PDZD11-203ENST00000473667 ERCC6L2Q5T890 1561 aa17.96■□□□□ 0.46
PDZD11-203ENST00000473667 TOP2BQ02880 1626 aa17.95■□□□□ 0.46
PDZD11-203ENST00000473667 BIVM-ERCC5R4GMW8 1640 aa17.95■□□□□ 0.46
PDZD11-203ENST00000473667 CEP170Q5SW79 1584 aa17.95■□□□□ 0.46
PDZD11-203ENST00000473667 NUP160Q12769 1436 aa17.94■□□□□ 0.46
PDZD11-203ENST00000473667 FHAD1B1AJZ9 1412 aa17.92■□□□□ 0.46
PDZD11-203ENST00000473667 ERICH3Q5RHP9 1530 aa17.88■□□□□ 0.45
PDZD11-203ENST00000473667 SHROOM2Q13796 1616 aa17.87■□□□□ 0.45
PDZD11-203ENST00000473667 AEBP2Q6ZN18 517 aaPredicted RBP17.84■□□□□ 0.45
PDZD11-203ENST00000473667 PRG4Q92954 1404 aaPredicted RBP17.79■□□□□ 0.44
PDZD11-203ENST00000473667 JPH4Q96JJ6 628 aa17.78■□□□□ 0.44
PDZD11-203ENST00000473667 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms