RNA–Protein interactions for RNA: ENST00000473663.1

MSRB1-203, Transcript of methionine sulfoxide reductase B1, humanhuman

TSL 5

Gene MSRB1, Length 373 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1-203ENST00000473663 NISCHQ9Y2I1 1504 aa20.05■□□□□ 0.8
MSRB1-203ENST00000473663 ABCC9O60706 1549 aa18.41■□□□□ 0.54
MSRB1-203ENST00000473663 CCDC180Q9P1Z9 1646 aa17.9■□□□□ 0.46
MSRB1-203ENST00000473663 DNAJC5BQ9UF47 199 aa17.65■□□□□ 0.42
MSRB1-203ENST00000473663 DCAF8L2P0C7V8 631 aa17.28■□□□□ 0.36
MSRB1-203ENST00000473663 RB1CC1Q8TDY2 1594 aa17.26■□□□□ 0.35
MSRB1-203ENST00000473663 PABPN1Q86U42 306 aaKnown RBP eCLIP17.24■□□□□ 0.35
MSRB1-203ENST00000473663 NACADO15069 1562 aa17.1■□□□□ 0.33
MSRB1-203ENST00000473663 BICRAQ9NZM4 1560 aa16.82■□□□□ 0.28
MSRB1-203ENST00000473663 UNC13AQ9UPW8 1703 aa16.8■□□□□ 0.28
MSRB1-203ENST00000473663 MYO15BQ96JP2 1530 aa16.75■□□□□ 0.27
MSRB1-203ENST00000473663 CECR2Q9BXF3 1484 aa16.58■□□□□ 0.24
MSRB1-203ENST00000473663 ZCCHC6Q5VYS8 1495 aaKnown RBP16.53■□□□□ 0.24
MSRB1-203ENST00000473663 CC2D2AQ9P2K1 1620 aa16.52■□□□□ 0.24
MSRB1-203ENST00000473663 DCAF1Q9Y4B6 1507 aa16.46■□□□□ 0.23
MSRB1-203ENST00000473663 SCRIBQ14160 1630 aa16.45■□□□□ 0.22
MSRB1-203ENST00000473663 SHROOM4Q9ULL8 1493 aa16.44■□□□□ 0.22
MSRB1-203ENST00000473663 EIF4G1Q04637 1599 aaKnown RBP16.42■□□□□ 0.22
MSRB1-203ENST00000473663 DNAJC5Q9H3Z4 198 aa16.31■□□□□ 0.2
MSRB1-203ENST00000473663 NCAPD3P42695 1498 aa15.87■□□□□ 0.13
MSRB1-203ENST00000473663 ERCC6Q03468 1493 aa15.86■□□□□ 0.13
MSRB1-203ENST00000473663 CUX2O14529 1486 aa15.85■□□□□ 0.13
MSRB1-203ENST00000473663 ATAD2BQ9ULI0 1458 aa15.81■□□□□ 0.12
MSRB1-203ENST00000473663 NESP48681 1621 aa15.76■□□□□ 0.11
MSRB1-203ENST00000473663 SMARCA2P51531 1590 aa15.65■□□□□ 0.1
MSRB1-203ENST00000473663 SMARCA4P51532 1647 aa15.63■□□□□ 0.09
MSRB1-203ENST00000473663 HMGXB3Q12766 1538 aa15.62■□□□□ 0.09
MSRB1-203ENST00000473663 BAZ1BQ9UIG0 1483 aaKnown RBP15.59■□□□□ 0.09
MSRB1-203ENST00000473663 TRIM41Q8WV44 630 aa15.54■□□□□ 0.08
MSRB1-203ENST00000473663 BAZ1AQ9NRL2 1556 aaPredicted RBP15.53■□□□□ 0.08
MSRB1-203ENST00000473663 MROH2BQ7Z745 1585 aa15.49■□□□□ 0.07
MSRB1-203ENST00000473663 THOC2Q8NI27 1593 aaKnown RBP15.48■□□□□ 0.07
MSRB1-203ENST00000473663 PDS5BQ9NTI5 1447 aa15.47■□□□□ 0.07
MSRB1-203ENST00000473663 PEG3Q9GZU2 1588 aa15.45■□□□□ 0.06
MSRB1-203ENST00000473663 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
MSRB1-203ENST00000473663 CADPSQ9ULU8 1353 aa15.43■□□□□ 0.06
MSRB1-203ENST00000473663 KIF21AQ7Z4S6 1674 aa15.38■□□□□ 0.05
MSRB1-203ENST00000473663 MRC2Q9UBG0 1479 aa15.32■□□□□ 0.04
MSRB1-203ENST00000473663 OSCARQ8IYS5 282 aa15.26■□□□□ 0.03
MSRB1-203ENST00000473663 WDR62O43379 1518 aa15.25■□□□□ 0.03
MSRB1-203ENST00000473663 WIZO95785 1651 aa15.24■□□□□ 0.03
MSRB1-203ENST00000473663 FANCD2Q9BXW9 1451 aa15.2■□□□□ 0.02
MSRB1-203ENST00000473663 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
MSRB1-203ENST00000473663 CFTRP13569 1480 aa15.14■□□□□ 0.01
MSRB1-203ENST00000473663 RSF1Q96T23 1441 aaPredicted RBP15.11■□□□□ 0.01
MSRB1-203ENST00000473663 URB2Q14146 1524 aaKnown RBP15.1■□□□□ 0.01
MSRB1-203ENST00000473663 ZNF608Q9ULD9 1512 aaPredicted RBP15□□□□□ -0.01
MSRB1-203ENST00000473663 TOP2AP11388 1531 aaKnown RBP14.99□□□□□ -0.01
MSRB1-203ENST00000473663 CYB5RLQ6IPT4 315 aa14.97□□□□□ -0.01
MSRB1-203ENST00000473663 CCDC88BA6NC98 1476 aa14.94□□□□□ -0.02
MSRB1-203ENST00000473663 IFT140Q96RY7 1462 aa14.93□□□□□ -0.02
MSRB1-203ENST00000473663 RIMBP3CA6NJZ7 1639 aa14.92□□□□□ -0.02
MSRB1-203ENST00000473663 RIMBP3BA6NNM3 1639 aa14.92□□□□□ -0.02
MSRB1-203ENST00000473663 RIMBP3Q9UFD9 1639 aa14.92□□□□□ -0.02
MSRB1-203ENST00000473663 ARHGEF11O15085 1522 aa14.89□□□□□ -0.03
MSRB1-203ENST00000473663 FBLN2P98095 1184 aa14.89□□□□□ -0.03
MSRB1-203ENST00000473663 TOPBP1Q92547 1522 aa14.88□□□□□ -0.03
MSRB1-203ENST00000473663 TRHP20396 242 aaPredicted RBP14.87□□□□□ -0.03
MSRB1-203ENST00000473663 AQRO60306 1485 aaKnown RBP eCLIP14.87□□□□□ -0.034e-8■■■■■ 64.5
MSRB1-203ENST00000473663 ABCC8Q09428 1581 aa14.78□□□□□ -0.04
MSRB1-203ENST00000473663 TDRD9Q8NDG6 1382 aaKnown RBP14.76□□□□□ -0.05
MSRB1-203ENST00000473663 ARAP1Q96P48 1450 aa14.76□□□□□ -0.05
MSRB1-203ENST00000473663 EIF4G3O43432 1585 aaKnown RBP14.75□□□□□ -0.05
MSRB1-203ENST00000473663 RAD54L2Q9Y4B4 1467 aa14.75□□□□□ -0.05
MSRB1-203ENST00000473663 DNMBPQ6XZF7 1577 aa14.73□□□□□ -0.05
MSRB1-203ENST00000473663 PRDM2Q13029 1718 aa14.72□□□□□ -0.05
MSRB1-203ENST00000473663 POLA1P09884 1462 aaPredicted RBP14.72□□□□□ -0.05
MSRB1-203ENST00000473663 TARBP1Q13395 1621 aaKnown RBP14.71□□□□□ -0.05
MSRB1-203ENST00000473663 SOGA1O94964 1423 aa14.71□□□□□ -0.05
MSRB1-203ENST00000473663 CHMP7Q8WUX9 453 aaPredicted RBP14.7□□□□□ -0.06
MSRB1-203ENST00000473663 CHD1O14646 1710 aa14.66□□□□□ -0.06
MSRB1-203ENST00000473663 SNAPC4Q5SXM2 1469 aa14.63□□□□□ -0.07
MSRB1-203ENST00000473663 FGD5Q6ZNL6 1462 aa14.59□□□□□ -0.07
MSRB1-203ENST00000473663 AEBP2Q6ZN18 517 aaPredicted RBP14.58□□□□□ -0.08
MSRB1-203ENST00000473663 CLASP1Q7Z460 1538 aa14.55□□□□□ -0.08
MSRB1-203ENST00000473663 GRIN2BQ13224 1484 aa14.54□□□□□ -0.08
MSRB1-203ENST00000473663 CUX1P39880 1505 aa14.54□□□□□ -0.08
MSRB1-203ENST00000473663 MAGI1Q96QZ7 1491 aaPredicted RBP14.52□□□□□ -0.08
MSRB1-203ENST00000473663 SYNJ2O15056 1496 aa14.5□□□□□ -0.09
MSRB1-203ENST00000473663 SYNJ1O43426 1573 aa14.5□□□□□ -0.09
MSRB1-203ENST00000473663 GAPVD1Q14C86 1478 aa14.49□□□□□ -0.09
MSRB1-203ENST00000473663 WDR97A6NE52 1622 aa14.43□□□□□ -0.1
MSRB1-203ENST00000473663 SUPT5HO00267 1087 aaKnown RBP14.42□□□□□ -0.1
MSRB1-203ENST00000473663 ABCA10Q8WWZ4 1543 aa14.4□□□□□ -0.1
MSRB1-203ENST00000473663 ERCC6L2Q5T890 1561 aa14.39□□□□□ -0.11
MSRB1-203ENST00000473663 GRIN2AQ12879 1464 aa14.34□□□□□ -0.11
MSRB1-203ENST00000473663 PBRM1Q86U86 1689 aa14.33□□□□□ -0.12
MSRB1-203ENST00000473663 WRNQ14191 1432 aaPredicted RBP eCLIP14.32□□□□□ -0.12
MSRB1-203ENST00000473663 NUP160Q12769 1436 aa14.32□□□□□ -0.12
MSRB1-203ENST00000473663 ABCA5Q8WWZ7 1642 aa14.31□□□□□ -0.12
MSRB1-203ENST00000473663 JPH4Q96JJ6 628 aa14.31□□□□□ -0.12
MSRB1-203ENST00000473663 CEP170Q5SW79 1584 aa14.29□□□□□ -0.12
MSRB1-203ENST00000473663 FHAD1B1AJZ9 1412 aa14.28□□□□□ -0.12
MSRB1-203ENST00000473663 FAM69CQ0P6D2 419 aa14.26□□□□□ -0.13
MSRB1-203ENST00000473663 PRG4Q92954 1404 aaPredicted RBP14.25□□□□□ -0.13
MSRB1-203ENST00000473663 ADAMTS12P58397 1594 aa14.23□□□□□ -0.13
MSRB1-203ENST00000473663 NPM1P06748 294 aaKnown RBP eCLIP14.21□□□□□ -0.13
MSRB1-203ENST00000473663 SHROOM2Q13796 1616 aa14.18□□□□□ -0.14
MSRB1-203ENST00000473663 TOP2BQ02880 1626 aa14.17□□□□□ -0.14
MSRB1-203ENST00000473663 ERICH3Q5RHP9 1530 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms