RNA–Protein interactions for RNA: ENST00000473652.1

TFAP2A-209, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 3

Gene TFAP2A, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-209ENST00000473652 NISCHQ9Y2I1 1504 aa42.89■■■■■ 4.46
TFAP2A-209ENST00000473652 CCDC180Q9P1Z9 1646 aa38.3■■■■□ 3.72
TFAP2A-209ENST00000473652 ABCC9O60706 1549 aa37.67■■■■□ 3.62
TFAP2A-209ENST00000473652 RB1CC1Q8TDY2 1594 aa36.19■■■■□ 3.38
TFAP2A-209ENST00000473652 NACADO15069 1562 aa36.07■■■■□ 3.37
TFAP2A-209ENST00000473652 DCAF8L2P0C7V8 631 aa36.02■■■■□ 3.36
TFAP2A-209ENST00000473652 MYO15BQ96JP2 1530 aa35.76■■■■□ 3.31
TFAP2A-209ENST00000473652 ZCCHC6Q5VYS8 1495 aaKnown RBP35.67■■■■□ 3.3
TFAP2A-209ENST00000473652 DCAF1Q9Y4B6 1507 aa35.5■■■■□ 3.27
TFAP2A-209ENST00000473652 UNC13AQ9UPW8 1703 aa35.23■■■■□ 3.23
TFAP2A-209ENST00000473652 PABPN1Q86U42 306 aaKnown RBP eCLIP35.14■■■■□ 3.22
TFAP2A-209ENST00000473652 BICRAQ9NZM4 1560 aa34.97■■■■□ 3.19
TFAP2A-209ENST00000473652 SCRIBQ14160 1630 aa34.9■■■■□ 3.18
TFAP2A-209ENST00000473652 SHROOM4Q9ULL8 1493 aa34.75■■■■□ 3.15
TFAP2A-209ENST00000473652 DNAJC5BQ9UF47 199 aa34.67■■■■□ 3.14
TFAP2A-209ENST00000473652 EIF4G1Q04637 1599 aaKnown RBP34.14■■■■□ 3.06
TFAP2A-209ENST00000473652 CC2D2AQ9P2K1 1620 aa34.05■■■■□ 3.04
TFAP2A-209ENST00000473652 CECR2Q9BXF3 1484 aa33.91■■■■□ 3.02
TFAP2A-209ENST00000473652 SMARCA4P51532 1647 aa33.35■■■□□ 2.93
TFAP2A-209ENST00000473652 BAZ1AQ9NRL2 1556 aaPredicted RBP33.32■■■□□ 2.92
TFAP2A-209ENST00000473652 NCAPD3P42695 1498 aa33.25■■■□□ 2.91
TFAP2A-209ENST00000473652 SMARCA2P51531 1590 aa33.24■■■□□ 2.91
TFAP2A-209ENST00000473652 ATAD2BQ9ULI0 1458 aa33.22■■■□□ 2.91
TFAP2A-209ENST00000473652 HMGXB3Q12766 1538 aa33.09■■■□□ 2.89
TFAP2A-209ENST00000473652 MROH2BQ7Z745 1585 aa33.02■■■□□ 2.88
TFAP2A-209ENST00000473652 PEG3Q9GZU2 1588 aa33.01■■■□□ 2.88
TFAP2A-209ENST00000473652 BAZ1BQ9UIG0 1483 aaKnown RBP32.99■■■□□ 2.87
TFAP2A-209ENST00000473652 WIZO95785 1651 aa32.65■■■□□ 2.82
TFAP2A-209ENST00000473652 ERCC6Q03468 1493 aa32.6■■■□□ 2.81
TFAP2A-209ENST00000473652 RSF1Q96T23 1441 aaPredicted RBP32.57■■■□□ 2.8
TFAP2A-209ENST00000473652 NESP48681 1621 aa32.48■■■□□ 2.79
TFAP2A-209ENST00000473652 LAMC3Q9Y6N6 1575 aa32.45■■■□□ 2.78
TFAP2A-209ENST00000473652 TOP2AP11388 1531 aaKnown RBP32.36■■■□□ 2.77
TFAP2A-209ENST00000473652 CUX2O14529 1486 aa32.29■■■□□ 2.76
TFAP2A-209ENST00000473652 CADPSQ9ULU8 1353 aa32.29■■■□□ 2.76
TFAP2A-209ENST00000473652 PDS5BQ9NTI5 1447 aa32.28■■■□□ 2.76
TFAP2A-209ENST00000473652 KIF21AQ7Z4S6 1674 aa32.11■■■□□ 2.73
TFAP2A-209ENST00000473652 THOC2Q8NI27 1593 aaKnown RBP32.07■■■□□ 2.72
TFAP2A-209ENST00000473652 CFTRP13569 1480 aa32.02■■■□□ 2.72
TFAP2A-209ENST00000473652 CEP164Q9UPV0 1460 aa31.94■■■□□ 2.7
TFAP2A-209ENST00000473652 CCDC88BA6NC98 1476 aa31.93■■■□□ 2.7
TFAP2A-209ENST00000473652 MRC2Q9UBG0 1479 aa31.93■■■□□ 2.7
TFAP2A-209ENST00000473652 FANCD2Q9BXW9 1451 aa31.92■■■□□ 2.7
TFAP2A-209ENST00000473652 WDR62O43379 1518 aa31.8■■■□□ 2.68
TFAP2A-209ENST00000473652 PRDM2Q13029 1718 aa31.78■■■□□ 2.68
TFAP2A-209ENST00000473652 SUPT5HO00267 1087 aaKnown RBP31.62■■■□□ 2.65
TFAP2A-209ENST00000473652 URB2Q14146 1524 aaKnown RBP31.57■■■□□ 2.64
TFAP2A-209ENST00000473652 DNAJC5Q9H3Z4 198 aa31.53■■■□□ 2.64
TFAP2A-209ENST00000473652 ABCC8Q09428 1581 aa31.43■■■□□ 2.62
TFAP2A-209ENST00000473652 TOPBP1Q92547 1522 aa31.37■■■□□ 2.61
TFAP2A-209ENST00000473652 DNMBPQ6XZF7 1577 aa31.34■■■□□ 2.61
TFAP2A-209ENST00000473652 IFT140Q96RY7 1462 aa31.28■■■□□ 2.6
TFAP2A-209ENST00000473652 POLA1P09884 1462 aaPredicted RBP31.08■■■□□ 2.57
TFAP2A-209ENST00000473652 ZNF608Q9ULD9 1512 aaPredicted RBP31.07■■■□□ 2.56
TFAP2A-209ENST00000473652 TARBP1Q13395 1621 aaKnown RBP31.01■■■□□ 2.55
TFAP2A-209ENST00000473652 CUX1P39880 1505 aa31■■■□□ 2.55
TFAP2A-209ENST00000473652 EIF4G3O43432 1585 aaKnown RBP30.98■■■□□ 2.55
TFAP2A-209ENST00000473652 FGD5Q6ZNL6 1462 aa30.98■■■□□ 2.55
TFAP2A-209ENST00000473652 SOGA1O94964 1423 aa30.98■■■□□ 2.55
TFAP2A-209ENST00000473652 OSCARQ8IYS5 282 aa30.92■■■□□ 2.54
TFAP2A-209ENST00000473652 RAD54L2Q9Y4B4 1467 aa30.92■■■□□ 2.54
TFAP2A-209ENST00000473652 AQRO60306 1485 aaKnown RBP eCLIP30.89■■■□□ 2.53
TFAP2A-209ENST00000473652 WDR97A6NE52 1622 aa30.85■■■□□ 2.53
TFAP2A-209ENST00000473652 TDRD9Q8NDG6 1382 aaKnown RBP30.8■■■□□ 2.52
TFAP2A-209ENST00000473652 WRNQ14191 1432 aaPredicted RBP eCLIP30.78■■■□□ 2.52
TFAP2A-209ENST00000473652 TOP2BQ02880 1626 aa30.71■■■□□ 2.51
TFAP2A-209ENST00000473652 BIVM-ERCC5R4GMW8 1640 aa30.69■■■□□ 2.5
TFAP2A-209ENST00000473652 GRIN2BQ13224 1484 aa30.67■■■□□ 2.5
TFAP2A-209ENST00000473652 ABCA10Q8WWZ4 1543 aa30.67■■■□□ 2.5
TFAP2A-209ENST00000473652 FBLN2P98095 1184 aa30.66■■■□□ 2.5
TFAP2A-209ENST00000473652 SYNJ1O43426 1573 aa30.65■■■□□ 2.5
TFAP2A-209ENST00000473652 SNAPC4Q5SXM2 1469 aa30.63■■■□□ 2.49
TFAP2A-209ENST00000473652 MAGI1Q96QZ7 1491 aaPredicted RBP30.63■■■□□ 2.49
TFAP2A-209ENST00000473652 CHD1O14646 1710 aa30.62■■■□□ 2.49
TFAP2A-209ENST00000473652 GAPVD1Q14C86 1478 aa30.62■■■□□ 2.49
TFAP2A-209ENST00000473652 PBRM1Q86U86 1689 aa30.55■■■□□ 2.48
TFAP2A-209ENST00000473652 ABCA5Q8WWZ7 1642 aa30.55■■■□□ 2.48
TFAP2A-209ENST00000473652 CHMP7Q8WUX9 453 aaPredicted RBP30.54■■■□□ 2.48
TFAP2A-209ENST00000473652 SYNJ2O15056 1496 aa30.49■■■□□ 2.47
TFAP2A-209ENST00000473652 TRIM41Q8WV44 630 aa30.45■■■□□ 2.47
TFAP2A-209ENST00000473652 RIMBP3CA6NJZ7 1639 aa30.38■■■□□ 2.45
TFAP2A-209ENST00000473652 RIMBP3BA6NNM3 1639 aa30.38■■■□□ 2.45
TFAP2A-209ENST00000473652 RIMBP3Q9UFD9 1639 aa30.38■■■□□ 2.45
TFAP2A-209ENST00000473652 ARHGEF11O15085 1522 aa30.37■■■□□ 2.45
TFAP2A-209ENST00000473652 ERICH3Q5RHP9 1530 aa30.32■■■□□ 2.44
TFAP2A-209ENST00000473652 ADAMTS12P58397 1594 aa30.3■■■□□ 2.44
TFAP2A-209ENST00000473652 CLASP1Q7Z460 1538 aa30.28■■■□□ 2.44
TFAP2A-209ENST00000473652 FHAD1B1AJZ9 1412 aa30.28■■■□□ 2.44
TFAP2A-209ENST00000473652 GRIN2AQ12879 1464 aa30.25■■■□□ 2.43
TFAP2A-209ENST00000473652 KIF27Q86VH2 1401 aa30.2■■■□□ 2.42
TFAP2A-209ENST00000473652 CYB5RLQ6IPT4 315 aa30.12■■■□□ 2.41
TFAP2A-209ENST00000473652 NUP160Q12769 1436 aa30.1■■■□□ 2.41
TFAP2A-209ENST00000473652 ARAP1Q96P48 1450 aa30.08■■■□□ 2.41
TFAP2A-209ENST00000473652 CEP170Q5SW79 1584 aa30.06■■■□□ 2.4
TFAP2A-209ENST00000473652 CUL7Q14999 1698 aa30.02■■■□□ 2.4
TFAP2A-209ENST00000473652 IGF1RP08069 1367 aa30.01■■■□□ 2.39
TFAP2A-209ENST00000473652 SHROOM2Q13796 1616 aa29.89■■■□□ 2.37
TFAP2A-209ENST00000473652 CARMIL1Q5VZK9 1371 aa29.88■■■□□ 2.37
TFAP2A-209ENST00000473652 RUSC2Q8N2Y8 1516 aa29.85■■■□□ 2.37
TFAP2A-209ENST00000473652 JPH4Q96JJ6 628 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms