RNA–Protein interactions for RNA: ENST00000473634.3

RN7SL400P-201, Transcript of RNA, 7SL, cytoplasmic 400, pseudogene, humanhuman

BASIC

Gene RN7SL400P, Length 296 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL400P-201ENST00000473634 NISCHQ9Y2I1 1504 aa25.07■■□□□ 1.6
RN7SL400P-201ENST00000473634 CCDC180Q9P1Z9 1646 aa22.64■■□□□ 1.22
RN7SL400P-201ENST00000473634 ABCC9O60706 1549 aa22.36■■□□□ 1.17
RN7SL400P-201ENST00000473634 RB1CC1Q8TDY2 1594 aa21.41■■□□□ 1.02
RN7SL400P-201ENST00000473634 NACADO15069 1562 aa21.27■■□□□ 1
RN7SL400P-201ENST00000473634 UNC13AQ9UPW8 1703 aa21.07■□□□□ 0.96
RN7SL400P-201ENST00000473634 MYO15BQ96JP2 1530 aa21.05■□□□□ 0.96
RN7SL400P-201ENST00000473634 ZCCHC6Q5VYS8 1495 aaKnown RBP20.86■□□□□ 0.93
RN7SL400P-201ENST00000473634 BICRAQ9NZM4 1560 aa20.83■□□□□ 0.92
RN7SL400P-201ENST00000473634 DNAJC5BQ9UF47 199 aa20.82■□□□□ 0.92
RN7SL400P-201ENST00000473634 DCAF1Q9Y4B6 1507 aa20.79■□□□□ 0.92
RN7SL400P-201ENST00000473634 DCAF8L2P0C7V8 631 aa20.77■□□□□ 0.92
RN7SL400P-201ENST00000473634 PABPN1Q86U42 306 aaKnown RBP eCLIP20.68■□□□□ 0.9
RN7SL400P-201ENST00000473634 SHROOM4Q9ULL8 1493 aa20.62■□□□□ 0.89
RN7SL400P-201ENST00000473634 SCRIBQ14160 1630 aa20.52■□□□□ 0.88
RN7SL400P-201ENST00000473634 CC2D2AQ9P2K1 1620 aa20.3■□□□□ 0.84
RN7SL400P-201ENST00000473634 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
RN7SL400P-201ENST00000473634 CECR2Q9BXF3 1484 aa20.17■□□□□ 0.82
RN7SL400P-201ENST00000473634 SMARCA4P51532 1647 aa19.62■□□□□ 0.73
RN7SL400P-201ENST00000473634 NCAPD3P42695 1498 aa19.58■□□□□ 0.72
RN7SL400P-201ENST00000473634 HMGXB3Q12766 1538 aa19.56■□□□□ 0.72
RN7SL400P-201ENST00000473634 SMARCA2P51531 1590 aa19.54■□□□□ 0.72
RN7SL400P-201ENST00000473634 ATAD2BQ9ULI0 1458 aa19.53■□□□□ 0.72
RN7SL400P-201ENST00000473634 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
RN7SL400P-201ENST00000473634 PEG3Q9GZU2 1588 aa19.46■□□□□ 0.71
RN7SL400P-201ENST00000473634 CUX2O14529 1486 aa19.35■□□□□ 0.69
RN7SL400P-201ENST00000473634 BAZ1BQ9UIG0 1483 aaKnown RBP19.35■□□□□ 0.69
RN7SL400P-201ENST00000473634 ERCC6Q03468 1493 aa19.31■□□□□ 0.68
RN7SL400P-201ENST00000473634 MROH2BQ7Z745 1585 aa19.31■□□□□ 0.68
RN7SL400P-201ENST00000473634 NESP48681 1621 aa19.25■□□□□ 0.67
RN7SL400P-201ENST00000473634 THOC2Q8NI27 1593 aaKnown RBP19.21■□□□□ 0.67
RN7SL400P-201ENST00000473634 LAMC3Q9Y6N6 1575 aa19.21■□□□□ 0.67
RN7SL400P-201ENST00000473634 KIF21AQ7Z4S6 1674 aa19.14■□□□□ 0.66
RN7SL400P-201ENST00000473634 WIZO95785 1651 aa19.11■□□□□ 0.65
RN7SL400P-201ENST00000473634 DNAJC5Q9H3Z4 198 aa19.09■□□□□ 0.65
RN7SL400P-201ENST00000473634 PDS5BQ9NTI5 1447 aa18.98■□□□□ 0.63
RN7SL400P-201ENST00000473634 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
RN7SL400P-201ENST00000473634 WDR62O43379 1518 aa18.9■□□□□ 0.62
RN7SL400P-201ENST00000473634 TOP2AP11388 1531 aaKnown RBP18.9■□□□□ 0.62
RN7SL400P-201ENST00000473634 MRC2Q9UBG0 1479 aa18.89■□□□□ 0.61
RN7SL400P-201ENST00000473634 RSF1Q96T23 1441 aaPredicted RBP18.87■□□□□ 0.61
RN7SL400P-201ENST00000473634 PRDM2Q13029 1718 aa18.83■□□□□ 0.61
RN7SL400P-201ENST00000473634 CEP164Q9UPV0 1460 aa18.82■□□□□ 0.6
RN7SL400P-201ENST00000473634 CFTRP13569 1480 aa18.8■□□□□ 0.6
RN7SL400P-201ENST00000473634 FANCD2Q9BXW9 1451 aa18.77■□□□□ 0.59
RN7SL400P-201ENST00000473634 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.58
RN7SL400P-201ENST00000473634 CCDC88BA6NC98 1476 aa18.57■□□□□ 0.56
RN7SL400P-201ENST00000473634 TOPBP1Q92547 1522 aa18.44■□□□□ 0.54
RN7SL400P-201ENST00000473634 DNMBPQ6XZF7 1577 aa18.44■□□□□ 0.54
RN7SL400P-201ENST00000473634 IFT140Q96RY7 1462 aa18.42■□□□□ 0.54
RN7SL400P-201ENST00000473634 EIF4G3O43432 1585 aaKnown RBP18.4■□□□□ 0.54
RN7SL400P-201ENST00000473634 ZNF608Q9ULD9 1512 aaPredicted RBP18.38■□□□□ 0.53
RN7SL400P-201ENST00000473634 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
RN7SL400P-201ENST00000473634 TARBP1Q13395 1621 aaKnown RBP18.34■□□□□ 0.53
RN7SL400P-201ENST00000473634 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
RN7SL400P-201ENST00000473634 CHD1O14646 1710 aa18.26■□□□□ 0.51
RN7SL400P-201ENST00000473634 RIMBP3CA6NJZ7 1639 aa18.25■□□□□ 0.51
RN7SL400P-201ENST00000473634 RIMBP3BA6NNM3 1639 aa18.25■□□□□ 0.51
RN7SL400P-201ENST00000473634 RIMBP3Q9UFD9 1639 aa18.25■□□□□ 0.51
RN7SL400P-201ENST00000473634 OSCARQ8IYS5 282 aa18.24■□□□□ 0.51
RN7SL400P-201ENST00000473634 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
RN7SL400P-201ENST00000473634 TRIM41Q8WV44 630 aa18.2■□□□□ 0.5
RN7SL400P-201ENST00000473634 ARHGEF11O15085 1522 aa18.17■□□□□ 0.5
RN7SL400P-201ENST00000473634 CUX1P39880 1505 aa18.16■□□□□ 0.5
RN7SL400P-201ENST00000473634 AQRO60306 1485 aaKnown RBP eCLIP18.14■□□□□ 0.5
RN7SL400P-201ENST00000473634 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.5
RN7SL400P-201ENST00000473634 RAD54L2Q9Y4B4 1467 aa18.12■□□□□ 0.49
RN7SL400P-201ENST00000473634 PBRM1Q86U86 1689 aa18.07■□□□□ 0.48
RN7SL400P-201ENST00000473634 SNAPC4Q5SXM2 1469 aa18.06■□□□□ 0.48
RN7SL400P-201ENST00000473634 SOGA1O94964 1423 aa18.06■□□□□ 0.48
RN7SL400P-201ENST00000473634 CLASP1Q7Z460 1538 aa18.03■□□□□ 0.48
RN7SL400P-201ENST00000473634 MAGI1Q96QZ7 1491 aaPredicted RBP18.03■□□□□ 0.48
RN7SL400P-201ENST00000473634 ABCA5Q8WWZ7 1642 aa18.03■□□□□ 0.48
RN7SL400P-201ENST00000473634 TDRD9Q8NDG6 1382 aaKnown RBP18■□□□□ 0.47
RN7SL400P-201ENST00000473634 GRIN2BQ13224 1484 aa17.99■□□□□ 0.47
RN7SL400P-201ENST00000473634 ARAP1Q96P48 1450 aa17.99■□□□□ 0.47
RN7SL400P-201ENST00000473634 SYNJ1O43426 1573 aa17.98■□□□□ 0.47
RN7SL400P-201ENST00000473634 BIVM-ERCC5R4GMW8 1640 aa17.97■□□□□ 0.47
RN7SL400P-201ENST00000473634 ABCA10Q8WWZ4 1543 aa17.97■□□□□ 0.47
RN7SL400P-201ENST00000473634 SYNJ2O15056 1496 aa17.95■□□□□ 0.46
RN7SL400P-201ENST00000473634 TOP2BQ02880 1626 aa17.92■□□□□ 0.46
RN7SL400P-201ENST00000473634 GAPVD1Q14C86 1478 aa17.91■□□□□ 0.46
RN7SL400P-201ENST00000473634 ADAMTS12P58397 1594 aa17.88■□□□□ 0.45
RN7SL400P-201ENST00000473634 FBLN2P98095 1184 aa17.86■□□□□ 0.45
RN7SL400P-201ENST00000473634 SUPT5HO00267 1087 aaKnown RBP17.84■□□□□ 0.45
RN7SL400P-201ENST00000473634 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
RN7SL400P-201ENST00000473634 GRIN2AQ12879 1464 aa17.79■□□□□ 0.44
RN7SL400P-201ENST00000473634 CYB5RLQ6IPT4 315 aa17.78■□□□□ 0.44
RN7SL400P-201ENST00000473634 CHMP7Q8WUX9 453 aaPredicted RBP17.78■□□□□ 0.44
RN7SL400P-201ENST00000473634 CEP170Q5SW79 1584 aa17.77■□□□□ 0.44
RN7SL400P-201ENST00000473634 ERICH3Q5RHP9 1530 aa17.76■□□□□ 0.43
RN7SL400P-201ENST00000473634 SHROOM2Q13796 1616 aa17.75■□□□□ 0.43
RN7SL400P-201ENST00000473634 NUP160Q12769 1436 aa17.73■□□□□ 0.43
RN7SL400P-201ENST00000473634 FHAD1B1AJZ9 1412 aa17.69■□□□□ 0.42
RN7SL400P-201ENST00000473634 ERCC6L2Q5T890 1561 aa17.69■□□□□ 0.42
RN7SL400P-201ENST00000473634 RUSC2Q8N2Y8 1516 aa17.65■□□□□ 0.42
RN7SL400P-201ENST00000473634 CUL7Q14999 1698 aa17.57■□□□□ 0.4
RN7SL400P-201ENST00000473634 TRHP20396 242 aaPredicted RBP17.54■□□□□ 0.4
RN7SL400P-201ENST00000473634 KIF13AQ9H1H9 1805 aa17.49■□□□□ 0.39
RN7SL400P-201ENST00000473634 PRG4Q92954 1404 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms