RNA–Protein interactions for RNA: ENST00000473606.1

AP1B1-210, Transcript of adaptor related protein complex 1 subunit beta 1, humanhuman

TSL 2

Gene AP1B1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1B1-210ENST00000473606 NISCHQ9Y2I1 1504 aa45.68■■■■■ 4.9
AP1B1-210ENST00000473606 CCDC180Q9P1Z9 1646 aa40.83■■■■■ 4.13
AP1B1-210ENST00000473606 ABCC9O60706 1549 aa40.16■■■■■ 4.02
AP1B1-210ENST00000473606 RB1CC1Q8TDY2 1594 aa38.53■■■■□ 3.76
AP1B1-210ENST00000473606 NACADO15069 1562 aa38.41■■■■□ 3.74
AP1B1-210ENST00000473606 DCAF8L2P0C7V8 631 aa38.21■■■■□ 3.71
AP1B1-210ENST00000473606 MYO15BQ96JP2 1530 aa38.07■■■■□ 3.69
AP1B1-210ENST00000473606 ZCCHC6Q5VYS8 1495 aaKnown RBP38.03■■■■□ 3.68
AP1B1-210ENST00000473606 DCAF1Q9Y4B6 1507 aa37.8■■■■□ 3.64
AP1B1-210ENST00000473606 UNC13AQ9UPW8 1703 aa37.68■■■■□ 3.62
AP1B1-210ENST00000473606 PABPN1Q86U42 306 aaKnown RBP eCLIP37.4■■■■□ 3.58
AP1B1-210ENST00000473606 BICRAQ9NZM4 1560 aa37.35■■■■□ 3.57
AP1B1-210ENST00000473606 SCRIBQ14160 1630 aa37.21■■■■□ 3.55
AP1B1-210ENST00000473606 DNAJC5BQ9UF47 199 aa37.01■■■■□ 3.52
AP1B1-210ENST00000473606 SHROOM4Q9ULL8 1493 aa36.98■■■■□ 3.51
AP1B1-210ENST00000473606 EIF4G1Q04637 1599 aaKnown RBP36.41■■■■□ 3.42
AP1B1-210ENST00000473606 CC2D2AQ9P2K1 1620 aa36.34■■■■□ 3.41
AP1B1-210ENST00000473606 CECR2Q9BXF3 1484 aa36.11■■■■□ 3.37
AP1B1-210ENST00000473606 SMARCA4P51532 1647 aa35.55■■■■□ 3.28
AP1B1-210ENST00000473606 BAZ1AQ9NRL2 1556 aaPredicted RBP35.47■■■■□ 3.27
AP1B1-210ENST00000473606 NCAPD3P42695 1498 aa35.4■■■■□ 3.26
AP1B1-210ENST00000473606 ATAD2BQ9ULI0 1458 aa35.39■■■■□ 3.26
AP1B1-210ENST00000473606 SMARCA2P51531 1590 aa35.38■■■■□ 3.25
AP1B1-210ENST00000473606 HMGXB3Q12766 1538 aa35.27■■■■□ 3.24
AP1B1-210ENST00000473606 MROH2BQ7Z745 1585 aa35.2■■■■□ 3.23
AP1B1-210ENST00000473606 PEG3Q9GZU2 1588 aa35.2■■■■□ 3.23
AP1B1-210ENST00000473606 BAZ1BQ9UIG0 1483 aaKnown RBP35.12■■■■□ 3.21
AP1B1-210ENST00000473606 WIZO95785 1651 aa34.82■■■■□ 3.17
AP1B1-210ENST00000473606 ERCC6Q03468 1493 aa34.66■■■■□ 3.14
AP1B1-210ENST00000473606 RSF1Q96T23 1441 aaPredicted RBP34.66■■■■□ 3.14
AP1B1-210ENST00000473606 NESP48681 1621 aa34.65■■■■□ 3.14
AP1B1-210ENST00000473606 LAMC3Q9Y6N6 1575 aa34.57■■■■□ 3.12
AP1B1-210ENST00000473606 TOP2AP11388 1531 aaKnown RBP34.46■■■■□ 3.11
AP1B1-210ENST00000473606 CUX2O14529 1486 aa34.39■■■■□ 3.1
AP1B1-210ENST00000473606 CADPSQ9ULU8 1353 aa34.34■■■■□ 3.09
AP1B1-210ENST00000473606 PDS5BQ9NTI5 1447 aa34.3■■■■□ 3.08
AP1B1-210ENST00000473606 KIF21AQ7Z4S6 1674 aa34.3■■■■□ 3.08
AP1B1-210ENST00000473606 THOC2Q8NI27 1593 aaKnown RBP34.26■■■■□ 3.07
AP1B1-210ENST00000473606 CFTRP13569 1480 aa34.1■■■■□ 3.05
AP1B1-210ENST00000473606 MRC2Q9UBG0 1479 aa34.01■■■■□ 3.03
AP1B1-210ENST00000473606 CCDC88BA6NC98 1476 aa34■■■■□ 3.03
AP1B1-210ENST00000473606 CEP164Q9UPV0 1460 aa34■■■■□ 3.03
AP1B1-210ENST00000473606 FANCD2Q9BXW9 1451 aa33.99■■■■□ 3.03
AP1B1-210ENST00000473606 PRDM2Q13029 1718 aa33.93■■■■□ 3.02
AP1B1-210ENST00000473606 WDR62O43379 1518 aa33.92■■■■□ 3.02
AP1B1-210ENST00000473606 URB2Q14146 1524 aaKnown RBP33.66■■■□□ 2.98
AP1B1-210ENST00000473606 DNAJC5Q9H3Z4 198 aa33.59■■■□□ 2.97
AP1B1-210ENST00000473606 SUPT5HO00267 1087 aaKnown RBP33.53■■■□□ 2.96
AP1B1-210ENST00000473606 TOPBP1Q92547 1522 aa33.42■■■□□ 2.94
AP1B1-210ENST00000473606 ABCC8Q09428 1581 aa33.39■■■□□ 2.94
AP1B1-210ENST00000473606 DNMBPQ6XZF7 1577 aa33.38■■■□□ 2.93
AP1B1-210ENST00000473606 IFT140Q96RY7 1462 aa33.28■■■□□ 2.92
AP1B1-210ENST00000473606 ZNF608Q9ULD9 1512 aaPredicted RBP33.13■■■□□ 2.89
AP1B1-210ENST00000473606 POLA1P09884 1462 aaPredicted RBP33.11■■■□□ 2.89
AP1B1-210ENST00000473606 TARBP1Q13395 1621 aaKnown RBP33.08■■■□□ 2.89
AP1B1-210ENST00000473606 EIF4G3O43432 1585 aaKnown RBP33.07■■■□□ 2.88
AP1B1-210ENST00000473606 CUX1P39880 1505 aa33.05■■■□□ 2.88
AP1B1-210ENST00000473606 FGD5Q6ZNL6 1462 aa33■■■□□ 2.87
AP1B1-210ENST00000473606 RAD54L2Q9Y4B4 1467 aa32.94■■■□□ 2.86
AP1B1-210ENST00000473606 SOGA1O94964 1423 aa32.94■■■□□ 2.86
AP1B1-210ENST00000473606 AQRO60306 1485 aaKnown RBP eCLIP32.89■■■□□ 2.862e-6■□□□□ 9
AP1B1-210ENST00000473606 WDR97A6NE52 1622 aa32.84■■■□□ 2.85
AP1B1-210ENST00000473606 OSCARQ8IYS5 282 aa32.83■■■□□ 2.85
AP1B1-210ENST00000473606 TDRD9Q8NDG6 1382 aaKnown RBP32.77■■■□□ 2.84
AP1B1-210ENST00000473606 WRNQ14191 1432 aaPredicted RBP eCLIP32.73■■■□□ 2.83
AP1B1-210ENST00000473606 BIVM-ERCC5R4GMW8 1640 aa32.73■■■□□ 2.83
AP1B1-210ENST00000473606 TOP2BQ02880 1626 aa32.71■■■□□ 2.83
AP1B1-210ENST00000473606 CHD1O14646 1710 aa32.71■■■□□ 2.83
AP1B1-210ENST00000473606 SYNJ1O43426 1573 aa32.69■■■□□ 2.82
AP1B1-210ENST00000473606 ABCA10Q8WWZ4 1543 aa32.66■■■□□ 2.82
AP1B1-210ENST00000473606 SNAPC4Q5SXM2 1469 aa32.63■■■□□ 2.81
AP1B1-210ENST00000473606 GRIN2BQ13224 1484 aa32.61■■■□□ 2.81
AP1B1-210ENST00000473606 PBRM1Q86U86 1689 aa32.6■■■□□ 2.81
AP1B1-210ENST00000473606 ABCA5Q8WWZ7 1642 aa32.59■■■□□ 2.81
AP1B1-210ENST00000473606 MAGI1Q96QZ7 1491 aaPredicted RBP32.59■■■□□ 2.81
AP1B1-210ENST00000473606 GAPVD1Q14C86 1478 aa32.58■■■□□ 2.81
AP1B1-210ENST00000473606 FBLN2P98095 1184 aa32.54■■■□□ 2.8
AP1B1-210ENST00000473606 SYNJ2O15056 1496 aa32.45■■■□□ 2.79
AP1B1-210ENST00000473606 RIMBP3CA6NJZ7 1639 aa32.44■■■□□ 2.78
AP1B1-210ENST00000473606 RIMBP3BA6NNM3 1639 aa32.44■■■□□ 2.78
AP1B1-210ENST00000473606 RIMBP3Q9UFD9 1639 aa32.44■■■□□ 2.78
AP1B1-210ENST00000473606 CHMP7Q8WUX9 453 aaPredicted RBP32.4■■■□□ 2.78
AP1B1-210ENST00000473606 TRIM41Q8WV44 630 aa32.39■■■□□ 2.78
AP1B1-210ENST00000473606 ARHGEF11O15085 1522 aa32.39■■■□□ 2.78
AP1B1-210ENST00000473606 ADAMTS12P58397 1594 aa32.32■■■□□ 2.76
AP1B1-210ENST00000473606 CLASP1Q7Z460 1538 aa32.31■■■□□ 2.76
AP1B1-210ENST00000473606 ERICH3Q5RHP9 1530 aa32.27■■■□□ 2.76
AP1B1-210ENST00000473606 GRIN2AQ12879 1464 aa32.22■■■□□ 2.75
AP1B1-210ENST00000473606 FHAD1B1AJZ9 1412 aa32.18■■■□□ 2.74
AP1B1-210ENST00000473606 ARAP1Q96P48 1450 aa32.1■■■□□ 2.73
AP1B1-210ENST00000473606 CEP170Q5SW79 1584 aa32.07■■■□□ 2.72
AP1B1-210ENST00000473606 NUP160Q12769 1436 aa32.07■■■□□ 2.72
AP1B1-210ENST00000473606 KIF27Q86VH2 1401 aa32.07■■■□□ 2.72
AP1B1-210ENST00000473606 CYB5RLQ6IPT4 315 aa32.02■■■□□ 2.72
AP1B1-210ENST00000473606 CUL7Q14999 1698 aa31.96■■■□□ 2.71
AP1B1-210ENST00000473606 IGF1RP08069 1367 aa31.91■■■□□ 2.7
AP1B1-210ENST00000473606 SHROOM2Q13796 1616 aa31.89■■■□□ 2.7
AP1B1-210ENST00000473606 RUSC2Q8N2Y8 1516 aa31.85■■■□□ 2.69
AP1B1-210ENST00000473606 ERCC6L2Q5T890 1561 aa31.82■■■□□ 2.68
AP1B1-210ENST00000473606 CARMIL1Q5VZK9 1371 aa31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms