RNA–Protein interactions for RNA: ENST00000473573.5

COL1A2-206, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 828 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-206ENST00000473573 NISCHQ9Y2I1 1504 aa40.35■■■■■ 4.05
COL1A2-206ENST00000473573 CCDC180Q9P1Z9 1646 aa36.07■■■■□ 3.36
COL1A2-206ENST00000473573 ABCC9O60706 1549 aa36.01■■■■□ 3.36
COL1A2-206ENST00000473573 RB1CC1Q8TDY2 1594 aa34.28■■■■□ 3.08
COL1A2-206ENST00000473573 DCAF8L2P0C7V8 631 aa34.12■■■■□ 3.05
COL1A2-206ENST00000473573 NACADO15069 1562 aa34.07■■■■□ 3.05
COL1A2-206ENST00000473573 DNAJC5BQ9UF47 199 aa33.62■■■□□ 2.97
COL1A2-206ENST00000473573 MYO15BQ96JP2 1530 aa33.6■■■□□ 2.97
COL1A2-206ENST00000473573 PABPN1Q86U42 306 aaKnown RBP eCLIP33.6■■■□□ 2.97
COL1A2-206ENST00000473573 UNC13AQ9UPW8 1703 aa33.52■■■□□ 2.96
COL1A2-206ENST00000473573 ZCCHC6Q5VYS8 1495 aaKnown RBP33.46■■■□□ 2.95
COL1A2-206ENST00000473573 BICRAQ9NZM4 1560 aa33.29■■■□□ 2.92
COL1A2-206ENST00000473573 DCAF1Q9Y4B6 1507 aa33.28■■■□□ 2.92
COL1A2-206ENST00000473573 SCRIBQ14160 1630 aa32.99■■■□□ 2.87
COL1A2-206ENST00000473573 SHROOM4Q9ULL8 1493 aa32.76■■■□□ 2.84
COL1A2-206ENST00000473573 CC2D2AQ9P2K1 1620 aa32.49■■■□□ 2.79
COL1A2-206ENST00000473573 EIF4G1Q04637 1599 aaKnown RBP32.46■■■□□ 2.79
COL1A2-206ENST00000473573 CECR2Q9BXF3 1484 aa32.38■■■□□ 2.77
COL1A2-206ENST00000473573 NCAPD3P42695 1498 aa31.46■■■□□ 2.63
COL1A2-206ENST00000473573 SMARCA4P51532 1647 aa31.44■■■□□ 2.62
COL1A2-206ENST00000473573 ATAD2BQ9ULI0 1458 aa31.42■■■□□ 2.62
COL1A2-206ENST00000473573 SMARCA2P51531 1590 aa31.32■■■□□ 2.6
COL1A2-206ENST00000473573 BAZ1AQ9NRL2 1556 aaPredicted RBP31.3■■■□□ 2.6
COL1A2-206ENST00000473573 HMGXB3Q12766 1538 aa31.23■■■□□ 2.59
COL1A2-206ENST00000473573 BAZ1BQ9UIG0 1483 aaKnown RBP31.14■■■□□ 2.58
COL1A2-206ENST00000473573 MROH2BQ7Z745 1585 aa31.13■■■□□ 2.57
COL1A2-206ENST00000473573 PEG3Q9GZU2 1588 aa31.07■■■□□ 2.56
COL1A2-206ENST00000473573 ERCC6Q03468 1493 aa31.07■■■□□ 2.56
COL1A2-206ENST00000473573 NESP48681 1621 aa30.99■■■□□ 2.55
COL1A2-206ENST00000473573 CUX2O14529 1486 aa30.87■■■□□ 2.53
COL1A2-206ENST00000473573 WIZO95785 1651 aa30.77■■■□□ 2.52
COL1A2-206ENST00000473573 LAMC3Q9Y6N6 1575 aa30.72■■■□□ 2.51
COL1A2-206ENST00000473573 DNAJC5Q9H3Z4 198 aa30.69■■■□□ 2.5
COL1A2-206ENST00000473573 THOC2Q8NI27 1593 aaKnown RBP30.57■■■□□ 2.48
COL1A2-206ENST00000473573 PDS5BQ9NTI5 1447 aa30.56■■■□□ 2.48
COL1A2-206ENST00000473573 KIF21AQ7Z4S6 1674 aa30.56■■■□□ 2.48
COL1A2-206ENST00000473573 RSF1Q96T23 1441 aaPredicted RBP30.55■■■□□ 2.48
COL1A2-206ENST00000473573 CADPSQ9ULU8 1353 aa30.54■■■□□ 2.48
COL1A2-206ENST00000473573 TOP2AP11388 1531 aaKnown RBP30.36■■■□□ 2.45
COL1A2-206ENST00000473573 MRC2Q9UBG0 1479 aa30.3■■■□□ 2.44
COL1A2-206ENST00000473573 CEP164Q9UPV0 1460 aa30.23■■■□□ 2.43
COL1A2-206ENST00000473573 CFTRP13569 1480 aa30.22■■■□□ 2.43
COL1A2-206ENST00000473573 FANCD2Q9BXW9 1451 aa30.22■■■□□ 2.43
COL1A2-206ENST00000473573 WDR62O43379 1518 aa30.19■■■□□ 2.42
COL1A2-206ENST00000473573 CCDC88BA6NC98 1476 aa30.04■■■□□ 2.4
COL1A2-206ENST00000473573 URB2Q14146 1524 aaKnown RBP29.96■■■□□ 2.39
COL1A2-206ENST00000473573 PRDM2Q13029 1718 aa29.91■■■□□ 2.38
COL1A2-206ENST00000473573 TOPBP1Q92547 1522 aa29.66■■■□□ 2.34
COL1A2-206ENST00000473573 IFT140Q96RY7 1462 aa29.59■■■□□ 2.33
COL1A2-206ENST00000473573 ZNF608Q9ULD9 1512 aaPredicted RBP29.57■■■□□ 2.32
COL1A2-206ENST00000473573 ABCC8Q09428 1581 aa29.56■■■□□ 2.32
COL1A2-206ENST00000473573 OSCARQ8IYS5 282 aa29.55■■■□□ 2.32
COL1A2-206ENST00000473573 DNMBPQ6XZF7 1577 aa29.55■■■□□ 2.32
COL1A2-206ENST00000473573 TRIM41Q8WV44 630 aa29.53■■■□□ 2.32
COL1A2-206ENST00000473573 SUPT5HO00267 1087 aaKnown RBP29.44■■■□□ 2.3
COL1A2-206ENST00000473573 EIF4G3O43432 1585 aaKnown RBP29.39■■■□□ 2.3
COL1A2-206ENST00000473573 TARBP1Q13395 1621 aaKnown RBP29.37■■■□□ 2.29
COL1A2-206ENST00000473573 POLA1P09884 1462 aaPredicted RBP29.36■■■□□ 2.29
COL1A2-206ENST00000473573 AQRO60306 1485 aaKnown RBP eCLIP29.34■■■□□ 2.29
COL1A2-206ENST00000473573 RAD54L2Q9Y4B4 1467 aa29.29■■■□□ 2.28
COL1A2-206ENST00000473573 SOGA1O94964 1423 aa29.26■■■□□ 2.27
COL1A2-206ENST00000473573 CUX1P39880 1505 aa29.23■■■□□ 2.27
COL1A2-206ENST00000473573 FGD5Q6ZNL6 1462 aa29.23■■■□□ 2.27
COL1A2-206ENST00000473573 TDRD9Q8NDG6 1382 aaKnown RBP29.2■■■□□ 2.26
COL1A2-206ENST00000473573 FBLN2P98095 1184 aa29.17■■■□□ 2.26
COL1A2-206ENST00000473573 CHD1O14646 1710 aa29.15■■■□□ 2.26
COL1A2-206ENST00000473573 RIMBP3CA6NJZ7 1639 aa29.13■■■□□ 2.25
COL1A2-206ENST00000473573 RIMBP3BA6NNM3 1639 aa29.13■■■□□ 2.25
COL1A2-206ENST00000473573 RIMBP3Q9UFD9 1639 aa29.13■■■□□ 2.25
COL1A2-206ENST00000473573 ARHGEF11O15085 1522 aa29.06■■■□□ 2.24
COL1A2-206ENST00000473573 SNAPC4Q5SXM2 1469 aa29.04■■■□□ 2.24
COL1A2-206ENST00000473573 WDR97A6NE52 1622 aa29.01■■■□□ 2.23
COL1A2-206ENST00000473573 GRIN2BQ13224 1484 aa28.96■■■□□ 2.23
COL1A2-206ENST00000473573 CHMP7Q8WUX9 453 aaPredicted RBP28.93■■■□□ 2.22
COL1A2-206ENST00000473573 MAGI1Q96QZ7 1491 aaPredicted RBP28.91■■■□□ 2.22
COL1A2-206ENST00000473573 CYB5RLQ6IPT4 315 aa28.9■■■□□ 2.22
COL1A2-206ENST00000473573 GAPVD1Q14C86 1478 aa28.9■■■□□ 2.22
COL1A2-206ENST00000473573 ABCA10Q8WWZ4 1543 aa28.86■■■□□ 2.21
COL1A2-206ENST00000473573 PBRM1Q86U86 1689 aa28.86■■■□□ 2.21
COL1A2-206ENST00000473573 SYNJ2O15056 1496 aa28.83■■■□□ 2.21
COL1A2-206ENST00000473573 WRNQ14191 1432 aaPredicted RBP eCLIP28.82■■■□□ 2.2
COL1A2-206ENST00000473573 ABCA5Q8WWZ7 1642 aa28.81■■■□□ 2.2
COL1A2-206ENST00000473573 SYNJ1O43426 1573 aa28.79■■■□□ 2.2
COL1A2-206ENST00000473573 ARAP1Q96P48 1450 aa28.79■■■□□ 2.2
COL1A2-206ENST00000473573 CLASP1Q7Z460 1538 aa28.79■■■□□ 2.2
COL1A2-206ENST00000473573 TOP2BQ02880 1626 aa28.78■■■□□ 2.2
COL1A2-206ENST00000473573 BIVM-ERCC5R4GMW8 1640 aa28.77■■■□□ 2.2
COL1A2-206ENST00000473573 GRIN2AQ12879 1464 aa28.59■■■□□ 2.17
COL1A2-206ENST00000473573 ADAMTS12P58397 1594 aa28.59■■■□□ 2.17
COL1A2-206ENST00000473573 TRHP20396 242 aaPredicted RBP28.54■■■□□ 2.16
COL1A2-206ENST00000473573 FHAD1B1AJZ9 1412 aa28.52■■■□□ 2.16
COL1A2-206ENST00000473573 ERICH3Q5RHP9 1530 aa28.5■■■□□ 2.15
COL1A2-206ENST00000473573 CEP170Q5SW79 1584 aa28.49■■■□□ 2.15
COL1A2-206ENST00000473573 NUP160Q12769 1436 aa28.46■■■□□ 2.15
COL1A2-206ENST00000473573 ERCC6L2Q5T890 1561 aa28.41■■■□□ 2.14
COL1A2-206ENST00000473573 SHROOM2Q13796 1616 aa28.3■■■□□ 2.12
COL1A2-206ENST00000473573 KIF27Q86VH2 1401 aa28.25■■■□□ 2.11
COL1A2-206ENST00000473573 PRG4Q92954 1404 aaPredicted RBP28.22■■■□□ 2.11
COL1A2-206ENST00000473573 JPH4Q96JJ6 628 aa28.22■■■□□ 2.11
COL1A2-206ENST00000473573 IGF1RP08069 1367 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms