RNA–Protein interactions for RNA: ENST00000473571.1

TFR2-208, Transcript of transferrin receptor 2, humanhuman

TSL 3

Gene TFR2, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFR2-208ENST00000473571 NISCHQ9Y2I1 1504 aa43.32■■■■■ 4.52
TFR2-208ENST00000473571 ABCC9O60706 1549 aa39.85■■■■□ 3.97
TFR2-208ENST00000473571 CCDC180Q9P1Z9 1646 aa38.84■■■■□ 3.81
TFR2-208ENST00000473571 DNAJC5BQ9UF47 199 aa38.25■■■■□ 3.71
TFR2-208ENST00000473571 RB1CC1Q8TDY2 1594 aa37.41■■■■□ 3.58
TFR2-208ENST00000473571 PABPN1Q86U42 306 aaKnown RBP eCLIP36.89■■■■□ 3.5
TFR2-208ENST00000473571 NACADO15069 1562 aa36.88■■■■□ 3.49
TFR2-208ENST00000473571 UNC13AQ9UPW8 1703 aa36.75■■■■□ 3.47
TFR2-208ENST00000473571 BICRAQ9NZM4 1560 aa36.46■■■■□ 3.43
TFR2-208ENST00000473571 DCAF8L2P0C7V8 631 aa36.45■■■■□ 3.43
TFR2-208ENST00000473571 ZCCHC6Q5VYS8 1495 aaKnown RBP36.05■■■■□ 3.36
TFR2-208ENST00000473571 MYO15BQ96JP2 1530 aa35.99■■■■□ 3.35
TFR2-208ENST00000473571 CECR2Q9BXF3 1484 aa35.95■■■■□ 3.35
TFR2-208ENST00000473571 CC2D2AQ9P2K1 1620 aa35.94■■■■□ 3.34
TFR2-208ENST00000473571 DCAF1Q9Y4B6 1507 aa35.79■■■■□ 3.32
TFR2-208ENST00000473571 DNAJC5Q9H3Z4 198 aa35.74■■■■□ 3.31
TFR2-208ENST00000473571 SHROOM4Q9ULL8 1493 aa35.69■■■■□ 3.3
TFR2-208ENST00000473571 EIF4G1Q04637 1599 aaKnown RBP35.61■■■■□ 3.29
TFR2-208ENST00000473571 SCRIBQ14160 1630 aa35.41■■■■□ 3.26
TFR2-208ENST00000473571 CUX2O14529 1486 aa34.65■■■■□ 3.14
TFR2-208ENST00000473571 ERCC6Q03468 1493 aa34.41■■■■□ 3.1
TFR2-208ENST00000473571 NCAPD3P42695 1498 aa34.05■■■■□ 3.04
TFR2-208ENST00000473571 NESP48681 1621 aa33.97■■■■□ 3.03
TFR2-208ENST00000473571 ATAD2BQ9ULI0 1458 aa33.86■■■■□ 3.01
TFR2-208ENST00000473571 THOC2Q8NI27 1593 aaKnown RBP33.85■■■■□ 3.01
TFR2-208ENST00000473571 TRIM41Q8WV44 630 aa33.83■■■■□ 3.01
TFR2-208ENST00000473571 HMGXB3Q12766 1538 aa33.76■■■■□ 3
TFR2-208ENST00000473571 SMARCA2P51531 1590 aa33.68■■■□□ 2.98
TFR2-208ENST00000473571 SMARCA4P51532 1647 aa33.63■■■□□ 2.97
TFR2-208ENST00000473571 KIF21AQ7Z4S6 1674 aa33.55■■■□□ 2.96
TFR2-208ENST00000473571 BAZ1AQ9NRL2 1556 aaPredicted RBP33.52■■■□□ 2.96
TFR2-208ENST00000473571 LAMC3Q9Y6N6 1575 aa33.47■■■□□ 2.95
TFR2-208ENST00000473571 BAZ1BQ9UIG0 1483 aaKnown RBP33.47■■■□□ 2.95
TFR2-208ENST00000473571 MROH2BQ7Z745 1585 aa33.4■■■□□ 2.94
TFR2-208ENST00000473571 PEG3Q9GZU2 1588 aa33.26■■■□□ 2.91
TFR2-208ENST00000473571 PDS5BQ9NTI5 1447 aa33.25■■■□□ 2.91
TFR2-208ENST00000473571 MRC2Q9UBG0 1479 aa33.11■■■□□ 2.89
TFR2-208ENST00000473571 WDR62O43379 1518 aa33.09■■■□□ 2.89
TFR2-208ENST00000473571 RSF1Q96T23 1441 aaPredicted RBP33.03■■■□□ 2.88
TFR2-208ENST00000473571 WIZO95785 1651 aa33.01■■■□□ 2.87
TFR2-208ENST00000473571 CADPSQ9ULU8 1353 aa32.96■■■□□ 2.87
TFR2-208ENST00000473571 OSCARQ8IYS5 282 aa32.82■■■□□ 2.84
TFR2-208ENST00000473571 CEP164Q9UPV0 1460 aa32.77■■■□□ 2.84
TFR2-208ENST00000473571 RIMBP3CA6NJZ7 1639 aa32.71■■■□□ 2.83
TFR2-208ENST00000473571 RIMBP3BA6NNM3 1639 aa32.71■■■□□ 2.83
TFR2-208ENST00000473571 RIMBP3Q9UFD9 1639 aa32.71■■■□□ 2.83
TFR2-208ENST00000473571 FANCD2Q9BXW9 1451 aa32.65■■■□□ 2.82
TFR2-208ENST00000473571 TOP2AP11388 1531 aaKnown RBP32.62■■■□□ 2.81
TFR2-208ENST00000473571 URB2Q14146 1524 aaKnown RBP32.5■■■□□ 2.79
TFR2-208ENST00000473571 ARHGEF11O15085 1522 aa32.46■■■□□ 2.79
TFR2-208ENST00000473571 CFTRP13569 1480 aa32.41■■■□□ 2.78
TFR2-208ENST00000473571 CCDC88BA6NC98 1476 aa32.33■■■□□ 2.77
TFR2-208ENST00000473571 ZNF608Q9ULD9 1512 aaPredicted RBP32.27■■■□□ 2.76
TFR2-208ENST00000473571 SUPT5HO00267 1087 aaKnown RBP32.21■■■□□ 2.75
TFR2-208ENST00000473571 CYB5RLQ6IPT4 315 aa32.19■■■□□ 2.74
TFR2-208ENST00000473571 TRHP20396 242 aaPredicted RBP32.15■■■□□ 2.74
TFR2-208ENST00000473571 PRDM2Q13029 1718 aa32.12■■■□□ 2.73
TFR2-208ENST00000473571 IFT140Q96RY7 1462 aa32.12■■■□□ 2.73
TFR2-208ENST00000473571 ARAP1Q96P48 1450 aa32.1■■■□□ 2.73
TFR2-208ENST00000473571 EIF4G3O43432 1585 aaKnown RBP32.07■■■□□ 2.72
TFR2-208ENST00000473571 CHD1O14646 1710 aa32.06■■■□□ 2.72
TFR2-208ENST00000473571 TOPBP1Q92547 1522 aa31.95■■■□□ 2.7
TFR2-208ENST00000473571 AEBP2Q6ZN18 517 aaPredicted RBP31.9■■■□□ 2.7
TFR2-208ENST00000473571 AQRO60306 1485 aaKnown RBP eCLIP31.8■■■□□ 2.681e-11■■■■□ 19.5
TFR2-208ENST00000473571 TARBP1Q13395 1621 aaKnown RBP31.77■■■□□ 2.68
TFR2-208ENST00000473571 DNMBPQ6XZF7 1577 aa31.73■■■□□ 2.67
TFR2-208ENST00000473571 FBLN2P98095 1184 aa31.73■■■□□ 2.67
TFR2-208ENST00000473571 ABCC8Q09428 1581 aa31.66■■■□□ 2.66
TFR2-208ENST00000473571 CLASP1Q7Z460 1538 aa31.59■■■□□ 2.65
TFR2-208ENST00000473571 POLA1P09884 1462 aaPredicted RBP31.56■■■□□ 2.64
TFR2-208ENST00000473571 RAD54L2Q9Y4B4 1467 aa31.48■■■□□ 2.63
TFR2-208ENST00000473571 SNAPC4Q5SXM2 1469 aa31.47■■■□□ 2.63
TFR2-208ENST00000473571 TDRD9Q8NDG6 1382 aaKnown RBP31.43■■■□□ 2.62
TFR2-208ENST00000473571 SYNJ1O43426 1573 aa31.43■■■□□ 2.62
TFR2-208ENST00000473571 CUX1P39880 1505 aa31.32■■■□□ 2.6
TFR2-208ENST00000473571 SOGA1O94964 1423 aa31.32■■■□□ 2.6
TFR2-208ENST00000473571 GAPVD1Q14C86 1478 aa31.29■■■□□ 2.6
TFR2-208ENST00000473571 MAGI1Q96QZ7 1491 aaPredicted RBP31.28■■■□□ 2.6
TFR2-208ENST00000473571 CHMP7Q8WUX9 453 aaPredicted RBP31.28■■■□□ 2.6
TFR2-208ENST00000473571 WDR97A6NE52 1622 aa31.27■■■□□ 2.6
TFR2-208ENST00000473571 FGD5Q6ZNL6 1462 aa31.22■■■□□ 2.59
TFR2-208ENST00000473571 SYNJ2O15056 1496 aa31.21■■■□□ 2.59
TFR2-208ENST00000473571 GRIN2BQ13224 1484 aa31.18■■■□□ 2.58
TFR2-208ENST00000473571 PBRM1Q86U86 1689 aa31.13■■■□□ 2.57
TFR2-208ENST00000473571 ERCC6L2Q5T890 1561 aa31.11■■■□□ 2.57
TFR2-208ENST00000473571 WRNQ14191 1432 aaPredicted RBP eCLIP31.1■■■□□ 2.57
TFR2-208ENST00000473571 TOP2BQ02880 1626 aa31■■■□□ 2.55
TFR2-208ENST00000473571 KIF13AQ9H1H9 1805 aa30.99■■■□□ 2.55
TFR2-208ENST00000473571 BIVM-ERCC5R4GMW8 1640 aa30.97■■■□□ 2.55
TFR2-208ENST00000473571 ABCA10Q8WWZ4 1543 aa30.9■■■□□ 2.54
TFR2-208ENST00000473571 ABCA5Q8WWZ7 1642 aa30.89■■■□□ 2.54
TFR2-208ENST00000473571 CEP170Q5SW79 1584 aa30.88■■■□□ 2.53
TFR2-208ENST00000473571 GRIN2AQ12879 1464 aa30.82■■■□□ 2.52
TFR2-208ENST00000473571 SHROOM2Q13796 1616 aa30.76■■■□□ 2.52
TFR2-208ENST00000473571 ADAMTS12P58397 1594 aa30.74■■■□□ 2.51
TFR2-208ENST00000473571 NUP160Q12769 1436 aa30.73■■■□□ 2.51
TFR2-208ENST00000473571 ILDR1Q86SU0 546 aaPredicted RBP30.73■■■□□ 2.51
TFR2-208ENST00000473571 KDM4FA0A1W2PPD8 638 aa30.62■■■□□ 2.49
TFR2-208ENST00000473571 ABCC10Q5T3U5 1492 aa30.57■■■□□ 2.48
TFR2-208ENST00000473571 DIP2BQ9P265 1576 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms