RNA–Protein interactions for RNA: ENST00000473343.5

TNFRSF25-211, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 1,591 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-211ENST00000473343 NISCHQ9Y2I1 1504 aa44.43■■■■■ 4.7
TNFRSF25-211ENST00000473343 CCDC180Q9P1Z9 1646 aa39.06■■■■□ 3.84
TNFRSF25-211ENST00000473343 ABCC9O60706 1549 aa37.49■■■■□ 3.59
TNFRSF25-211ENST00000473343 ZCCHC6Q5VYS8 1495 aaKnown RBP37.19■■■■□ 3.54
TNFRSF25-211ENST00000473343 DCAF8L2P0C7V8 631 aa36.81■■■■□ 3.48
TNFRSF25-211ENST00000473343 DCAF1Q9Y4B6 1507 aa36.78■■■■□ 3.48
TNFRSF25-211ENST00000473343 MYO15BQ96JP2 1530 aa36.63■■■■□ 3.45
TNFRSF25-211ENST00000473343 NACADO15069 1562 aa36.56■■■■□ 3.44
TNFRSF25-211ENST00000473343 RB1CC1Q8TDY2 1594 aa36.39■■■■□ 3.42
TNFRSF25-211ENST00000473343 SCRIBQ14160 1630 aa35.75■■■■□ 3.31
TNFRSF25-211ENST00000473343 SHROOM4Q9ULL8 1493 aa35.65■■■■□ 3.3
TNFRSF25-211ENST00000473343 UNC13AQ9UPW8 1703 aa35.52■■■■□ 3.28
TNFRSF25-211ENST00000473343 BICRAQ9NZM4 1560 aa35.28■■■■□ 3.24
TNFRSF25-211ENST00000473343 PABPN1Q86U42 306 aaKnown RBP eCLIP35.21■■■■□ 3.23
TNFRSF25-211ENST00000473343 CECR2Q9BXF3 1484 aa34.53■■■■□ 3.12
TNFRSF25-211ENST00000473343 BAZ1AQ9NRL2 1556 aaPredicted RBP34.36■■■■□ 3.09
TNFRSF25-211ENST00000473343 EIF4G1Q04637 1599 aaKnown RBP34.28■■■■□ 3.08
TNFRSF25-211ENST00000473343 SMARCA4P51532 1647 aa34.27■■■■□ 3.08
TNFRSF25-211ENST00000473343 MROH2BQ7Z745 1585 aa34.26■■■■□ 3.08
TNFRSF25-211ENST00000473343 RSF1Q96T23 1441 aaPredicted RBP34.19■■■■□ 3.06
TNFRSF25-211ENST00000473343 SUPT5HO00267 1087 aaKnown RBP33.97■■■■□ 3.03
TNFRSF25-211ENST00000473343 PEG3Q9GZU2 1588 aa33.93■■■■□ 3.02
TNFRSF25-211ENST00000473343 CC2D2AQ9P2K1 1620 aa33.93■■■■□ 3.02
TNFRSF25-211ENST00000473343 ATAD2BQ9ULI0 1458 aa33.91■■■■□ 3.02
TNFRSF25-211ENST00000473343 WIZO95785 1651 aa33.91■■■■□ 3.02
TNFRSF25-211ENST00000473343 SMARCA2P51531 1590 aa33.87■■■■□ 3.01
TNFRSF25-211ENST00000473343 NCAPD3P42695 1498 aa33.76■■■■□ 3
TNFRSF25-211ENST00000473343 DNAJC5BQ9UF47 199 aa33.69■■■□□ 2.98
TNFRSF25-211ENST00000473343 BAZ1BQ9UIG0 1483 aaKnown RBP33.66■■■□□ 2.98
TNFRSF25-211ENST00000473343 HMGXB3Q12766 1538 aa33.64■■■□□ 2.98
TNFRSF25-211ENST00000473343 TOP2AP11388 1531 aaKnown RBP33.6■■■□□ 2.97
TNFRSF25-211ENST00000473343 CCDC88BA6NC98 1476 aa33.23■■■□□ 2.91
TNFRSF25-211ENST00000473343 CADPSQ9ULU8 1353 aa32.83■■■□□ 2.85
TNFRSF25-211ENST00000473343 CFTRP13569 1480 aa32.81■■■□□ 2.84
TNFRSF25-211ENST00000473343 NESP48681 1621 aa32.7■■■□□ 2.83
TNFRSF25-211ENST00000473343 LAMC3Q9Y6N6 1575 aa32.69■■■□□ 2.82
TNFRSF25-211ENST00000473343 PRDM2Q13029 1718 aa32.51■■■□□ 2.8
TNFRSF25-211ENST00000473343 PDS5BQ9NTI5 1447 aa32.49■■■□□ 2.79
TNFRSF25-211ENST00000473343 FANCD2Q9BXW9 1451 aa32.44■■■□□ 2.78
TNFRSF25-211ENST00000473343 CEP164Q9UPV0 1460 aa32.31■■■□□ 2.76
TNFRSF25-211ENST00000473343 KIF21AQ7Z4S6 1674 aa32.27■■■□□ 2.76
TNFRSF25-211ENST00000473343 ABCC8Q09428 1581 aa32.26■■■□□ 2.76
TNFRSF25-211ENST00000473343 ERCC6Q03468 1493 aa32.24■■■□□ 2.75
TNFRSF25-211ENST00000473343 WRNQ14191 1432 aaPredicted RBP eCLIP32.2■■■□□ 2.75
TNFRSF25-211ENST00000473343 CHIC1Q5VXU3 224 aa32.2■■■□□ 2.75
TNFRSF25-211ENST00000473343 MRC2Q9UBG0 1479 aa32.09■■■□□ 2.73
TNFRSF25-211ENST00000473343 CUX1P39880 1505 aa32.09■■■□□ 2.73
TNFRSF25-211ENST00000473343 URB2Q14146 1524 aaKnown RBP32.07■■■□□ 2.72
TNFRSF25-211ENST00000473343 SYNJ1O43426 1573 aa32.06■■■□□ 2.72
TNFRSF25-211ENST00000473343 TRIM41Q8WV44 630 aa32.04■■■□□ 2.72
TNFRSF25-211ENST00000473343 DNMBPQ6XZF7 1577 aa32.03■■■□□ 2.72
TNFRSF25-211ENST00000473343 TOPBP1Q92547 1522 aa32.01■■■□□ 2.72
TNFRSF25-211ENST00000473343 TOP2BQ02880 1626 aa32.01■■■□□ 2.72
TNFRSF25-211ENST00000473343 BIVM-ERCC5R4GMW8 1640 aa31.98■■■□□ 2.71
TNFRSF25-211ENST00000473343 THOC2Q8NI27 1593 aaKnown RBP31.98■■■□□ 2.71
TNFRSF25-211ENST00000473343 WDR62O43379 1518 aa31.95■■■□□ 2.71
TNFRSF25-211ENST00000473343 FGD5Q6ZNL6 1462 aa31.85■■■□□ 2.69
TNFRSF25-211ENST00000473343 POLA1P09884 1462 aaPredicted RBP31.81■■■□□ 2.68
TNFRSF25-211ENST00000473343 SOGA1O94964 1423 aa31.7■■■□□ 2.66
TNFRSF25-211ENST00000473343 CUX2O14529 1486 aa31.69■■■□□ 2.66
TNFRSF25-211ENST00000473343 RAD54L2Q9Y4B4 1467 aa31.67■■■□□ 2.66
TNFRSF25-211ENST00000473343 IFT140Q96RY7 1462 aa31.6■■■□□ 2.65
TNFRSF25-211ENST00000473343 ABCA10Q8WWZ4 1543 aa31.58■■■□□ 2.65
TNFRSF25-211ENST00000473343 TARBP1Q13395 1621 aaKnown RBP31.57■■■□□ 2.65
TNFRSF25-211ENST00000473343 WDR97A6NE52 1622 aa31.49■■■□□ 2.63
TNFRSF25-211ENST00000473343 KIF27Q86VH2 1401 aa31.46■■■□□ 2.63
TNFRSF25-211ENST00000473343 RUSC2Q8N2Y8 1516 aa31.44■■■□□ 2.62
TNFRSF25-211ENST00000473343 TDRD9Q8NDG6 1382 aaKnown RBP31.43■■■□□ 2.62
TNFRSF25-211ENST00000473343 EEA1Q15075 1411 aa31.41■■■□□ 2.62
TNFRSF25-211ENST00000473343 ZNF608Q9ULD9 1512 aaPredicted RBP31.4■■■□□ 2.62
TNFRSF25-211ENST00000473343 FAM9AQ8IZU1 332 aaPredicted RBP31.36■■■□□ 2.61
TNFRSF25-211ENST00000473343 ABCA5Q8WWZ7 1642 aa31.35■■■□□ 2.61
TNFRSF25-211ENST00000473343 AQRO60306 1485 aaKnown RBP eCLIP31.34■■■□□ 2.61
TNFRSF25-211ENST00000473343 GAPVD1Q14C86 1478 aa31.34■■■□□ 2.61
TNFRSF25-211ENST00000473343 EIF4G3O43432 1585 aaKnown RBP31.28■■■□□ 2.6
TNFRSF25-211ENST00000473343 CSRNP3Q8WYN3 585 aa31.27■■■□□ 2.6
TNFRSF25-211ENST00000473343 IGF1RP08069 1367 aa31.26■■■□□ 2.59
TNFRSF25-211ENST00000473343 GRIN2BQ13224 1484 aa31.21■■■□□ 2.59
TNFRSF25-211ENST00000473343 ERICH3Q5RHP9 1530 aa31.21■■■□□ 2.59
TNFRSF25-211ENST00000473343 PBRM1Q86U86 1689 aa31.15■■■□□ 2.58
TNFRSF25-211ENST00000473343 PRXQ9BXM0 1461 aa31.08■■■□□ 2.57
TNFRSF25-211ENST00000473343 CARMIL1Q5VZK9 1371 aa31.08■■■□□ 2.57
TNFRSF25-211ENST00000473343 SNAPC4Q5SXM2 1469 aa31.06■■■□□ 2.56
TNFRSF25-211ENST00000473343 CUL7Q14999 1698 aa31.06■■■□□ 2.56
TNFRSF25-211ENST00000473343 MAGI1Q96QZ7 1491 aaPredicted RBP31.03■■■□□ 2.56
TNFRSF25-211ENST00000473343 FHAD1B1AJZ9 1412 aa31.01■■■□□ 2.55
TNFRSF25-211ENST00000473343 ADAMTS12P58397 1594 aa31■■■□□ 2.55
TNFRSF25-211ENST00000473343 KIF21BO75037 1637 aa31■■■□□ 2.55
TNFRSF25-211ENST00000473343 RAPGEF2Q9Y4G8 1499 aa30.97■■■□□ 2.55
TNFRSF25-211ENST00000473343 SYNJ2O15056 1496 aa30.92■■■□□ 2.54
TNFRSF25-211ENST00000473343 GOLGA3Q08378 1498 aa30.91■■■□□ 2.54
TNFRSF25-211ENST00000473343 LOC105371045A0A1W2PR82 267 aa30.89■■■□□ 2.54
TNFRSF25-211ENST00000473343 EHMT2Q96KQ7 1210 aa30.89■■■□□ 2.54
TNFRSF25-211ENST00000473343 CHMP7Q8WUX9 453 aaPredicted RBP30.85■■■□□ 2.53
TNFRSF25-211ENST00000473343 GRIN2AQ12879 1464 aa30.81■■■□□ 2.52
TNFRSF25-211ENST00000473343 FBLN2P98095 1184 aa30.8■■■□□ 2.52
TNFRSF25-211ENST00000473343 UBTFP17480 764 aaKnown RBP30.77■■■□□ 2.52
TNFRSF25-211ENST00000473343 CHD1O14646 1710 aa30.69■■■□□ 2.5
TNFRSF25-211ENST00000473343 TNIKQ9UKE5 1360 aa30.69■■■□□ 2.5
TNFRSF25-211ENST00000473343 NUP160Q12769 1436 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms