RNA–Protein interactions for RNA: ENST00000473195.5

TRAIP-203, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-203ENST00000473195 NISCHQ9Y2I1 1504 aa30.21■■■□□ 2.43
TRAIP-203ENST00000473195 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
TRAIP-203ENST00000473195 ABCC9O60706 1549 aa26.95■■□□□ 1.9
TRAIP-203ENST00000473195 RB1CC1Q8TDY2 1594 aa25.67■■□□□ 1.7
TRAIP-203ENST00000473195 NACADO15069 1562 aa25.49■■□□□ 1.67
TRAIP-203ENST00000473195 DCAF8L2P0C7V8 631 aa25.47■■□□□ 1.67
TRAIP-203ENST00000473195 DNAJC5BQ9UF47 199 aa25.37■■□□□ 1.65
TRAIP-203ENST00000473195 UNC13AQ9UPW8 1703 aa25.32■■□□□ 1.64
TRAIP-203ENST00000473195 MYO15BQ96JP2 1530 aa25.12■■□□□ 1.61
TRAIP-203ENST00000473195 PABPN1Q86U42 306 aaKnown RBP eCLIP25.09■■□□□ 1.61
TRAIP-203ENST00000473195 ZCCHC6Q5VYS8 1495 aaKnown RBP25.07■■□□□ 1.6
TRAIP-203ENST00000473195 BICRAQ9NZM4 1560 aa24.98■■□□□ 1.59
TRAIP-203ENST00000473195 DCAF1Q9Y4B6 1507 aa24.89■■□□□ 1.57
TRAIP-203ENST00000473195 SCRIBQ14160 1630 aa24.76■■□□□ 1.55
TRAIP-203ENST00000473195 SHROOM4Q9ULL8 1493 aa24.46■■□□□ 1.51
TRAIP-203ENST00000473195 CC2D2AQ9P2K1 1620 aa24.37■■□□□ 1.49
TRAIP-203ENST00000473195 EIF4G1Q04637 1599 aaKnown RBP24.33■■□□□ 1.48
TRAIP-203ENST00000473195 CECR2Q9BXF3 1484 aa24.19■■□□□ 1.46
TRAIP-203ENST00000473195 DNAJC5Q9H3Z4 198 aa24.17■■□□□ 1.46
TRAIP-203ENST00000473195 SMARCA4P51532 1647 aa23.59■■□□□ 1.37
TRAIP-203ENST00000473195 ATAD2BQ9ULI0 1458 aa23.5■■□□□ 1.35
TRAIP-203ENST00000473195 NCAPD3P42695 1498 aa23.49■■□□□ 1.35
TRAIP-203ENST00000473195 SMARCA2P51531 1590 aa23.43■■□□□ 1.34
TRAIP-203ENST00000473195 BAZ1AQ9NRL2 1556 aaPredicted RBP23.43■■□□□ 1.34
TRAIP-203ENST00000473195 HMGXB3Q12766 1538 aa23.38■■□□□ 1.33
TRAIP-203ENST00000473195 MROH2BQ7Z745 1585 aa23.34■■□□□ 1.33
TRAIP-203ENST00000473195 BAZ1BQ9UIG0 1483 aaKnown RBP23.3■■□□□ 1.32
TRAIP-203ENST00000473195 PEG3Q9GZU2 1588 aa23.28■■□□□ 1.32
TRAIP-203ENST00000473195 NESP48681 1621 aa23.22■■□□□ 1.31
TRAIP-203ENST00000473195 ERCC6Q03468 1493 aa23.2■■□□□ 1.3
TRAIP-203ENST00000473195 WIZO95785 1651 aa23.15■■□□□ 1.3
TRAIP-203ENST00000473195 CUX2O14529 1486 aa23.05■■□□□ 1.28
TRAIP-203ENST00000473195 KIF21AQ7Z4S6 1674 aa23.02■■□□□ 1.28
TRAIP-203ENST00000473195 LAMC3Q9Y6N6 1575 aa23.01■■□□□ 1.27
TRAIP-203ENST00000473195 THOC2Q8NI27 1593 aaKnown RBP22.96■■□□□ 1.27
TRAIP-203ENST00000473195 RSF1Q96T23 1441 aaPredicted RBP22.84■■□□□ 1.25
TRAIP-203ENST00000473195 PDS5BQ9NTI5 1447 aa22.81■■□□□ 1.24
TRAIP-203ENST00000473195 CADPSQ9ULU8 1353 aa22.8■■□□□ 1.24
TRAIP-203ENST00000473195 TOP2AP11388 1531 aaKnown RBP22.75■■□□□ 1.23
TRAIP-203ENST00000473195 MRC2Q9UBG0 1479 aa22.65■■□□□ 1.22
TRAIP-203ENST00000473195 TRIM41Q8WV44 630 aa22.62■■□□□ 1.21
TRAIP-203ENST00000473195 WDR62O43379 1518 aa22.61■■□□□ 1.21
TRAIP-203ENST00000473195 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
TRAIP-203ENST00000473195 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
TRAIP-203ENST00000473195 CFTRP13569 1480 aa22.59■■□□□ 1.21
TRAIP-203ENST00000473195 PRDM2Q13029 1718 aa22.58■■□□□ 1.21
TRAIP-203ENST00000473195 CCDC88BA6NC98 1476 aa22.49■■□□□ 1.19
TRAIP-203ENST00000473195 URB2Q14146 1524 aaKnown RBP22.43■■□□□ 1.18
TRAIP-203ENST00000473195 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
TRAIP-203ENST00000473195 ZNF608Q9ULD9 1512 aaPredicted RBP22.15■■□□□ 1.14
TRAIP-203ENST00000473195 DNMBPQ6XZF7 1577 aa22.14■■□□□ 1.13
TRAIP-203ENST00000473195 IFT140Q96RY7 1462 aa22.1■■□□□ 1.13
TRAIP-203ENST00000473195 EIF4G3O43432 1585 aaKnown RBP22.07■■□□□ 1.12
TRAIP-203ENST00000473195 ABCC8Q09428 1581 aa22.07■■□□□ 1.12
TRAIP-203ENST00000473195 TARBP1Q13395 1621 aaKnown RBP22.04■■□□□ 1.12
TRAIP-203ENST00000473195 SUPT5HO00267 1087 aaKnown RBP22.01■■□□□ 1.11
TRAIP-203ENST00000473195 OSCARQ8IYS5 282 aa22■■□□□ 1.11
TRAIP-203ENST00000473195 POLA1P09884 1462 aaPredicted RBP21.98■■□□□ 1.11
TRAIP-203ENST00000473195 CHD1O14646 1710 aa21.95■■□□□ 1.1
TRAIP-203ENST00000473195 AQRO60306 1485 aaKnown RBP eCLIP21.94■■□□□ 1.16e-9■■■■■ 45.1
TRAIP-203ENST00000473195 RAD54L2Q9Y4B4 1467 aa21.94■■□□□ 1.1
TRAIP-203ENST00000473195 CUX1P39880 1505 aa21.91■■□□□ 1.1
TRAIP-203ENST00000473195 FGD5Q6ZNL6 1462 aa21.89■■□□□ 1.09
TRAIP-203ENST00000473195 RIMBP3CA6NJZ7 1639 aa21.87■■□□□ 1.09
TRAIP-203ENST00000473195 RIMBP3BA6NNM3 1639 aa21.87■■□□□ 1.09
TRAIP-203ENST00000473195 RIMBP3Q9UFD9 1639 aa21.87■■□□□ 1.09
TRAIP-203ENST00000473195 SOGA1O94964 1423 aa21.86■■□□□ 1.09
TRAIP-203ENST00000473195 TDRD9Q8NDG6 1382 aaKnown RBP21.82■■□□□ 1.08
TRAIP-203ENST00000473195 WDR97A6NE52 1622 aa21.81■■□□□ 1.08
TRAIP-203ENST00000473195 FBLN2P98095 1184 aa21.75■■□□□ 1.07
TRAIP-203ENST00000473195 PBRM1Q86U86 1689 aa21.75■■□□□ 1.07
TRAIP-203ENST00000473195 ARHGEF11O15085 1522 aa21.75■■□□□ 1.07
TRAIP-203ENST00000473195 SNAPC4Q5SXM2 1469 aa21.73■■□□□ 1.07
TRAIP-203ENST00000473195 BIVM-ERCC5R4GMW8 1640 aa21.64■■□□□ 1.05
TRAIP-203ENST00000473195 GRIN2BQ13224 1484 aa21.64■■□□□ 1.05
TRAIP-203ENST00000473195 ABCA5Q8WWZ7 1642 aa21.63■■□□□ 1.05
TRAIP-203ENST00000473195 SYNJ1O43426 1573 aa21.62■■□□□ 1.05
TRAIP-203ENST00000473195 GAPVD1Q14C86 1478 aa21.61■■□□□ 1.05
TRAIP-203ENST00000473195 MAGI1Q96QZ7 1491 aaPredicted RBP21.61■■□□□ 1.05
TRAIP-203ENST00000473195 ABCA10Q8WWZ4 1543 aa21.6■■□□□ 1.05
TRAIP-203ENST00000473195 TOP2BQ02880 1626 aa21.59■■□□□ 1.05
TRAIP-203ENST00000473195 CLASP1Q7Z460 1538 aa21.58■■□□□ 1.04
TRAIP-203ENST00000473195 AEBP2Q6ZN18 517 aaPredicted RBP21.56■■□□□ 1.04
TRAIP-203ENST00000473195 CHMP7Q8WUX9 453 aaPredicted RBP21.56■■□□□ 1.04
TRAIP-203ENST00000473195 CYB5RLQ6IPT4 315 aa21.55■■□□□ 1.04
TRAIP-203ENST00000473195 SYNJ2O15056 1496 aa21.55■■□□□ 1.04
TRAIP-203ENST00000473195 ARAP1Q96P48 1450 aa21.55■■□□□ 1.04
TRAIP-203ENST00000473195 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
TRAIP-203ENST00000473195 ADAMTS12P58397 1594 aa21.45■■□□□ 1.02
TRAIP-203ENST00000473195 GRIN2AQ12879 1464 aa21.39■■□□□ 1.01
TRAIP-203ENST00000473195 CEP170Q5SW79 1584 aa21.38■■□□□ 1.01
TRAIP-203ENST00000473195 ERCC6L2Q5T890 1561 aa21.33■■□□□ 1.01
TRAIP-203ENST00000473195 ERICH3Q5RHP9 1530 aa21.33■■□□□ 1
TRAIP-203ENST00000473195 FHAD1B1AJZ9 1412 aa21.29■■□□□ 1
TRAIP-203ENST00000473195 NUP160Q12769 1436 aa21.28■■□□□ 1
TRAIP-203ENST00000473195 TRHP20396 242 aaPredicted RBP21.27■■□□□ 1
TRAIP-203ENST00000473195 SHROOM2Q13796 1616 aa21.24■□□□□ 0.99
TRAIP-203ENST00000473195 RUSC2Q8N2Y8 1516 aa21.15■□□□□ 0.98
TRAIP-203ENST00000473195 CUL7Q14999 1698 aa21.12■□□□□ 0.97
TRAIP-203ENST00000473195 KIF27Q86VH2 1401 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms