RNA–Protein interactions for RNA: ENST00000473185.1

CHI3L1-204, Transcript of chitinase 3 like 1, humanhuman

TSL 2

Gene CHI3L1, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHI3L1-204ENST00000473185 NISCHQ9Y2I1 1504 aa43.17■■■■■ 4.5
CHI3L1-204ENST00000473185 CCDC180Q9P1Z9 1646 aa37.67■■■■□ 3.62
CHI3L1-204ENST00000473185 ZCCHC6Q5VYS8 1495 aaKnown RBP36.33■■■■□ 3.41
CHI3L1-204ENST00000473185 DCAF1Q9Y4B6 1507 aa35.68■■■■□ 3.3
CHI3L1-204ENST00000473185 DCAF8L2P0C7V8 631 aa35.57■■■■□ 3.29
CHI3L1-204ENST00000473185 ABCC9O60706 1549 aa35.41■■■■□ 3.26
CHI3L1-204ENST00000473185 SHROOM4Q9ULL8 1493 aa35.38■■■■□ 3.25
CHI3L1-204ENST00000473185 MYO15BQ96JP2 1530 aa35.17■■■■□ 3.22
CHI3L1-204ENST00000473185 NACADO15069 1562 aa34.96■■■■□ 3.19
CHI3L1-204ENST00000473185 SCRIBQ14160 1630 aa34.68■■■■□ 3.14
CHI3L1-204ENST00000473185 RB1CC1Q8TDY2 1594 aa34.66■■■■□ 3.14
CHI3L1-204ENST00000473185 UNC13AQ9UPW8 1703 aa34.08■■■■□ 3.05
CHI3L1-204ENST00000473185 SUPT5HO00267 1087 aaKnown RBP34.08■■■■□ 3.05
CHI3L1-204ENST00000473185 BICRAQ9NZM4 1560 aa33.59■■■□□ 2.97
CHI3L1-204ENST00000473185 RSF1Q96T23 1441 aaPredicted RBP33.52■■■□□ 2.96
CHI3L1-204ENST00000473185 CECR2Q9BXF3 1484 aa33.52■■■□□ 2.96
CHI3L1-204ENST00000473185 MROH2BQ7Z745 1585 aa33.37■■■□□ 2.93
CHI3L1-204ENST00000473185 BAZ1AQ9NRL2 1556 aaPredicted RBP33.36■■■□□ 2.93
CHI3L1-204ENST00000473185 PABPN1Q86U42 306 aaKnown RBP eCLIP33.36■■■□□ 2.93
CHI3L1-204ENST00000473185 SMARCA4P51532 1647 aa33.22■■■□□ 2.91
CHI3L1-204ENST00000473185 WIZO95785 1651 aa33.18■■■□□ 2.9
CHI3L1-204ENST00000473185 TOP2AP11388 1531 aaKnown RBP32.81■■■□□ 2.84
CHI3L1-204ENST00000473185 PEG3Q9GZU2 1588 aa32.76■■■□□ 2.83
CHI3L1-204ENST00000473185 CHIC1Q5VXU3 224 aa32.65■■■□□ 2.82
CHI3L1-204ENST00000473185 EIF4G1Q04637 1599 aaKnown RBP32.59■■■□□ 2.81
CHI3L1-204ENST00000473185 SMARCA2P51531 1590 aa32.58■■■□□ 2.81
CHI3L1-204ENST00000473185 ATAD2BQ9ULI0 1458 aa32.55■■■□□ 2.8
CHI3L1-204ENST00000473185 BAZ1BQ9UIG0 1483 aaKnown RBP32.43■■■□□ 2.78
CHI3L1-204ENST00000473185 CCDC88BA6NC98 1476 aa32.41■■■□□ 2.78
CHI3L1-204ENST00000473185 HMGXB3Q12766 1538 aa32.27■■■□□ 2.76
CHI3L1-204ENST00000473185 NCAPD3P42695 1498 aa32.2■■■□□ 2.75
CHI3L1-204ENST00000473185 CC2D2AQ9P2K1 1620 aa32.08■■■□□ 2.73
CHI3L1-204ENST00000473185 TRIM41Q8WV44 630 aa32■■■□□ 2.71
CHI3L1-204ENST00000473185 ABCC8Q09428 1581 aa31.88■■■□□ 2.69
CHI3L1-204ENST00000473185 PRDM2Q13029 1718 aa31.62■■■□□ 2.65
CHI3L1-204ENST00000473185 WRNQ14191 1432 aaPredicted RBP eCLIP31.59■■■□□ 2.65
CHI3L1-204ENST00000473185 CFTRP13569 1480 aa31.56■■■□□ 2.64
CHI3L1-204ENST00000473185 SYNJ1O43426 1573 aa31.51■■■□□ 2.63
CHI3L1-204ENST00000473185 FAM9AQ8IZU1 332 aaPredicted RBP31.46■■■□□ 2.63
CHI3L1-204ENST00000473185 LOC105371045A0A1W2PR82 267 aa31.41■■■□□ 2.62
CHI3L1-204ENST00000473185 CADPSQ9ULU8 1353 aa31.4■■■□□ 2.62
CHI3L1-204ENST00000473185 TOP2BQ02880 1626 aa31.36■■■□□ 2.61
CHI3L1-204ENST00000473185 BIVM-ERCC5R4GMW8 1640 aa31.36■■■□□ 2.61
CHI3L1-204ENST00000473185 SOGA1O94964 1423 aa31.23■■■□□ 2.59
CHI3L1-204ENST00000473185 EEA1Q15075 1411 aa31.21■■■□□ 2.59
CHI3L1-204ENST00000473185 CUX1P39880 1505 aa31.21■■■□□ 2.59
CHI3L1-204ENST00000473185 LAMC3Q9Y6N6 1575 aa31.18■■■□□ 2.58
CHI3L1-204ENST00000473185 NESP48681 1621 aa31.13■■■□□ 2.57
CHI3L1-204ENST00000473185 FANCD2Q9BXW9 1451 aa31.12■■■□□ 2.57
CHI3L1-204ENST00000473185 RUSC2Q8N2Y8 1516 aa31.11■■■□□ 2.57
CHI3L1-204ENST00000473185 DNAJC5BQ9UF47 199 aa31.06■■■□□ 2.56
CHI3L1-204ENST00000473185 EHMT2Q96KQ7 1210 aa31.05■■■□□ 2.56
CHI3L1-204ENST00000473185 CSRNP3Q8WYN3 585 aa30.96■■■□□ 2.55
CHI3L1-204ENST00000473185 CEP164Q9UPV0 1460 aa30.93■■■□□ 2.54
CHI3L1-204ENST00000473185 DNMBPQ6XZF7 1577 aa30.91■■■□□ 2.54
CHI3L1-204ENST00000473185 KIF21BO75037 1637 aa30.87■■■□□ 2.53
CHI3L1-204ENST00000473185 KIF21AQ7Z4S6 1674 aa30.87■■■□□ 2.53
CHI3L1-204ENST00000473185 PDS5BQ9NTI5 1447 aa30.87■■■□□ 2.53
CHI3L1-204ENST00000473185 FGD5Q6ZNL6 1462 aa30.85■■■□□ 2.53
CHI3L1-204ENST00000473185 GOLGA3Q08378 1498 aa30.84■■■□□ 2.53
CHI3L1-204ENST00000473185 TOPBP1Q92547 1522 aa30.8■■■□□ 2.52
CHI3L1-204ENST00000473185 KIF27Q86VH2 1401 aa30.76■■■□□ 2.52
CHI3L1-204ENST00000473185 URB2Q14146 1524 aaKnown RBP30.71■■■□□ 2.51
CHI3L1-204ENST00000473185 TNIKQ9UKE5 1360 aa30.7■■■□□ 2.5
CHI3L1-204ENST00000473185 CUX2O14529 1486 aa30.67■■■□□ 2.5
CHI3L1-204ENST00000473185 POLA1P09884 1462 aaPredicted RBP30.66■■■□□ 2.5
CHI3L1-204ENST00000473185 UBTFP17480 764 aaKnown RBP30.63■■■□□ 2.49
CHI3L1-204ENST00000473185 RAPGEF2Q9Y4G8 1499 aa30.62■■■□□ 2.49
CHI3L1-204ENST00000473185 ERICH3Q5RHP9 1530 aa30.61■■■□□ 2.49
CHI3L1-204ENST00000473185 CEP162Q5TB80 1403 aa30.61■■■□□ 2.49
CHI3L1-204ENST00000473185 PRXQ9BXM0 1461 aa30.58■■■□□ 2.49
CHI3L1-204ENST00000473185 WDR97A6NE52 1622 aa30.55■■■□□ 2.48
CHI3L1-204ENST00000473185 ABCA10Q8WWZ4 1543 aa30.55■■■□□ 2.48
CHI3L1-204ENST00000473185 RAD54L2Q9Y4B4 1467 aa30.55■■■□□ 2.48
CHI3L1-204ENST00000473185 MRC2Q9UBG0 1479 aa30.51■■■□□ 2.47
CHI3L1-204ENST00000473185 IGF1RP08069 1367 aa30.4■■■□□ 2.46
CHI3L1-204ENST00000473185 ERCC6Q03468 1493 aa30.37■■■□□ 2.45
CHI3L1-204ENST00000473185 ABCA5Q8WWZ7 1642 aa30.36■■■□□ 2.45
CHI3L1-204ENST00000473185 WDR62O43379 1518 aa30.36■■■□□ 2.45
CHI3L1-204ENST00000473185 TARBP1Q13395 1621 aaKnown RBP30.35■■■□□ 2.45
CHI3L1-204ENST00000473185 CUL7Q14999 1698 aa30.33■■■□□ 2.45
CHI3L1-204ENST00000473185 CLIP1P30622 1438 aa30.32■■■□□ 2.44
CHI3L1-204ENST00000473185 CARMIL1Q5VZK9 1371 aa30.29■■■□□ 2.44
CHI3L1-204ENST00000473185 THOC2Q8NI27 1593 aaKnown RBP30.27■■■□□ 2.44
CHI3L1-204ENST00000473185 GAPVD1Q14C86 1478 aa30.22■■■□□ 2.43
CHI3L1-204ENST00000473185 TDRD9Q8NDG6 1382 aaKnown RBP30.2■■■□□ 2.43
CHI3L1-204ENST00000473185 PCGF6Q9BYE7 350 aa30.19■■■□□ 2.42
CHI3L1-204ENST00000473185 PBRM1Q86U86 1689 aa30.18■■■□□ 2.42
CHI3L1-204ENST00000473185 IFT140Q96RY7 1462 aa30.14■■■□□ 2.42
CHI3L1-204ENST00000473185 RANGAP1P46060 587 aaPredicted RBP30.13■■■□□ 2.41
CHI3L1-204ENST00000473185 TRIM26Q12899 539 aaPredicted RBP30.13■■■□□ 2.41
CHI3L1-204ENST00000473185 VPS8Q8N3P4 1428 aa30.09■■■□□ 2.41
CHI3L1-204ENST00000473185 CTTNBP2Q8WZ74 1663 aa30.08■■■□□ 2.41
CHI3L1-204ENST00000473185 ARAP1Q96P48 1450 aa30.02■■■□□ 2.4
CHI3L1-204ENST00000473185 AQRO60306 1485 aaKnown RBP eCLIP30■■■□□ 2.39
CHI3L1-204ENST00000473185 PPARGC1BQ86YN6 1023 aaKnown RBP29.98■■■□□ 2.39
CHI3L1-204ENST00000473185 EIF4G3O43432 1585 aaKnown RBP29.98■■■□□ 2.39
CHI3L1-204ENST00000473185 ZNF608Q9ULD9 1512 aaPredicted RBP29.97■■■□□ 2.39
CHI3L1-204ENST00000473185 ADAMTS12P58397 1594 aa29.97■■■□□ 2.39
CHI3L1-204ENST00000473185 ARHGAP35Q9NRY4 1499 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms