RNA–Protein interactions for RNA: ENST00000473112.6

IVD-202, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 5

Gene IVD, Length 920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-202ENST00000473112 NISCHQ9Y2I1 1504 aa34.05■■■■□ 3.04
IVD-202ENST00000473112 CCDC180Q9P1Z9 1646 aa30.3■■■□□ 2.44
IVD-202ENST00000473112 ABCC9O60706 1549 aa29.83■■■□□ 2.37
IVD-202ENST00000473112 RB1CC1Q8TDY2 1594 aa28.45■■■□□ 2.14
IVD-202ENST00000473112 ZCCHC6Q5VYS8 1495 aaKnown RBP28.42■■■□□ 2.14
IVD-202ENST00000473112 NACADO15069 1562 aa28.37■■■□□ 2.13
IVD-202ENST00000473112 MYO15BQ96JP2 1530 aa28.28■■■□□ 2.12
IVD-202ENST00000473112 DCAF1Q9Y4B6 1507 aa28.22■■■□□ 2.11
IVD-202ENST00000473112 DCAF8L2P0C7V8 631 aa28.2■■■□□ 2.1
IVD-202ENST00000473112 UNC13AQ9UPW8 1703 aa28.01■■■□□ 2.07
IVD-202ENST00000473112 DNAJC5BQ9UF47 199 aa27.9■■■□□ 2.06
IVD-202ENST00000473112 PABPN1Q86U42 306 aaKnown RBP eCLIP27.82■■■□□ 2.04
IVD-202ENST00000473112 BICRAQ9NZM4 1560 aa27.74■■■□□ 2.03
IVD-202ENST00000473112 SCRIBQ14160 1630 aa27.58■■■□□ 2.01
IVD-202ENST00000473112 SHROOM4Q9ULL8 1493 aa27.22■■□□□ 1.95
IVD-202ENST00000473112 CC2D2AQ9P2K1 1620 aa26.99■■□□□ 1.91
IVD-202ENST00000473112 EIF4G1Q04637 1599 aaKnown RBP26.96■■□□□ 1.91
IVD-202ENST00000473112 CECR2Q9BXF3 1484 aa26.81■■□□□ 1.88
IVD-202ENST00000473112 SMARCA4P51532 1647 aa26.43■■□□□ 1.82
IVD-202ENST00000473112 BAZ1AQ9NRL2 1556 aaPredicted RBP26.37■■□□□ 1.81
IVD-202ENST00000473112 MROH2BQ7Z745 1585 aa26.25■■□□□ 1.79
IVD-202ENST00000473112 PEG3Q9GZU2 1588 aa26.19■■□□□ 1.78
IVD-202ENST00000473112 ATAD2BQ9ULI0 1458 aa26.17■■□□□ 1.78
IVD-202ENST00000473112 SMARCA2P51531 1590 aa26.16■■□□□ 1.78
IVD-202ENST00000473112 NCAPD3P42695 1498 aa26.15■■□□□ 1.78
IVD-202ENST00000473112 HMGXB3Q12766 1538 aa26.08■■□□□ 1.77
IVD-202ENST00000473112 WIZO95785 1651 aa26.02■■□□□ 1.76
IVD-202ENST00000473112 RSF1Q96T23 1441 aaPredicted RBP25.97■■□□□ 1.75
IVD-202ENST00000473112 BAZ1BQ9UIG0 1483 aaKnown RBP25.95■■□□□ 1.74
IVD-202ENST00000473112 NESP48681 1621 aa25.74■■□□□ 1.71
IVD-202ENST00000473112 TOP2AP11388 1531 aaKnown RBP25.73■■□□□ 1.71
IVD-202ENST00000473112 ERCC6Q03468 1493 aa25.64■■□□□ 1.69
IVD-202ENST00000473112 CUX2O14529 1486 aa25.53■■□□□ 1.68
IVD-202ENST00000473112 LAMC3Q9Y6N6 1575 aa25.51■■□□□ 1.67
IVD-202ENST00000473112 KIF21AQ7Z4S6 1674 aa25.45■■□□□ 1.66
IVD-202ENST00000473112 THOC2Q8NI27 1593 aaKnown RBP25.42■■□□□ 1.66
IVD-202ENST00000473112 CCDC88BA6NC98 1476 aa25.38■■□□□ 1.65
IVD-202ENST00000473112 CADPSQ9ULU8 1353 aa25.34■■□□□ 1.65
IVD-202ENST00000473112 DNAJC5Q9H3Z4 198 aa25.33■■□□□ 1.65
IVD-202ENST00000473112 SUPT5HO00267 1087 aaKnown RBP25.3■■□□□ 1.64
IVD-202ENST00000473112 PRDM2Q13029 1718 aa25.29■■□□□ 1.64
IVD-202ENST00000473112 PDS5BQ9NTI5 1447 aa25.29■■□□□ 1.64
IVD-202ENST00000473112 CFTRP13569 1480 aa25.28■■□□□ 1.64
IVD-202ENST00000473112 MRC2Q9UBG0 1479 aa25.1■■□□□ 1.61
IVD-202ENST00000473112 FANCD2Q9BXW9 1451 aa25.08■■□□□ 1.6
IVD-202ENST00000473112 WDR62O43379 1518 aa25.07■■□□□ 1.6
IVD-202ENST00000473112 CEP164Q9UPV0 1460 aa25.04■■□□□ 1.6
IVD-202ENST00000473112 URB2Q14146 1524 aaKnown RBP24.91■■□□□ 1.58
IVD-202ENST00000473112 DNMBPQ6XZF7 1577 aa24.74■■□□□ 1.55
IVD-202ENST00000473112 TOPBP1Q92547 1522 aa24.72■■□□□ 1.55
IVD-202ENST00000473112 ABCC8Q09428 1581 aa24.7■■□□□ 1.54
IVD-202ENST00000473112 CUX1P39880 1505 aa24.62■■□□□ 1.53
IVD-202ENST00000473112 ZNF608Q9ULD9 1512 aaPredicted RBP24.57■■□□□ 1.52
IVD-202ENST00000473112 POLA1P09884 1462 aaPredicted RBP24.52■■□□□ 1.52
IVD-202ENST00000473112 IFT140Q96RY7 1462 aa24.52■■□□□ 1.52
IVD-202ENST00000473112 BIVM-ERCC5R4GMW8 1640 aa24.52■■□□□ 1.52
IVD-202ENST00000473112 TARBP1Q13395 1621 aaKnown RBP24.51■■□□□ 1.51
IVD-202ENST00000473112 SYNJ1O43426 1573 aa24.48■■□□□ 1.51
IVD-202ENST00000473112 TOP2BQ02880 1626 aa24.48■■□□□ 1.51
IVD-202ENST00000473112 FGD5Q6ZNL6 1462 aa24.48■■□□□ 1.51
IVD-202ENST00000473112 WRNQ14191 1432 aaPredicted RBP eCLIP24.46■■□□□ 1.51
IVD-202ENST00000473112 EIF4G3O43432 1585 aaKnown RBP24.42■■□□□ 1.5
IVD-202ENST00000473112 WDR97A6NE52 1622 aa24.42■■□□□ 1.5
IVD-202ENST00000473112 OSCARQ8IYS5 282 aa24.41■■□□□ 1.5
IVD-202ENST00000473112 RAD54L2Q9Y4B4 1467 aa24.38■■□□□ 1.49
IVD-202ENST00000473112 SOGA1O94964 1423 aa24.36■■□□□ 1.49
IVD-202ENST00000473112 AQRO60306 1485 aaKnown RBP eCLIP24.35■■□□□ 1.495e-7■■■■■ 27.6
IVD-202ENST00000473112 TRIM41Q8WV44 630 aa24.28■■□□□ 1.48
IVD-202ENST00000473112 ABCA10Q8WWZ4 1543 aa24.26■■□□□ 1.47
IVD-202ENST00000473112 CHD1O14646 1710 aa24.25■■□□□ 1.47
IVD-202ENST00000473112 ABCA5Q8WWZ7 1642 aa24.22■■□□□ 1.47
IVD-202ENST00000473112 TDRD9Q8NDG6 1382 aaKnown RBP24.22■■□□□ 1.47
IVD-202ENST00000473112 PBRM1Q86U86 1689 aa24.19■■□□□ 1.46
IVD-202ENST00000473112 RIMBP3CA6NJZ7 1639 aa24.17■■□□□ 1.46
IVD-202ENST00000473112 RIMBP3BA6NNM3 1639 aa24.17■■□□□ 1.46
IVD-202ENST00000473112 RIMBP3Q9UFD9 1639 aa24.17■■□□□ 1.46
IVD-202ENST00000473112 GAPVD1Q14C86 1478 aa24.11■■□□□ 1.45
IVD-202ENST00000473112 GRIN2BQ13224 1484 aa24.08■■□□□ 1.45
IVD-202ENST00000473112 ARHGEF11O15085 1522 aa24.08■■□□□ 1.45
IVD-202ENST00000473112 SNAPC4Q5SXM2 1469 aa24.07■■□□□ 1.44
IVD-202ENST00000473112 FBLN2P98095 1184 aa24.06■■□□□ 1.44
IVD-202ENST00000473112 MAGI1Q96QZ7 1491 aaPredicted RBP24.03■■□□□ 1.44
IVD-202ENST00000473112 ERICH3Q5RHP9 1530 aa23.99■■□□□ 1.43
IVD-202ENST00000473112 ADAMTS12P58397 1594 aa23.95■■□□□ 1.43
IVD-202ENST00000473112 CLASP1Q7Z460 1538 aa23.93■■□□□ 1.42
IVD-202ENST00000473112 SYNJ2O15056 1496 aa23.92■■□□□ 1.42
IVD-202ENST00000473112 KIF27Q86VH2 1401 aa23.92■■□□□ 1.42
IVD-202ENST00000473112 CHMP7Q8WUX9 453 aaPredicted RBP23.91■■□□□ 1.42
IVD-202ENST00000473112 CYB5RLQ6IPT4 315 aa23.87■■□□□ 1.41
IVD-202ENST00000473112 ARAP1Q96P48 1450 aa23.87■■□□□ 1.41
IVD-202ENST00000473112 CUL7Q14999 1698 aa23.84■■□□□ 1.41
IVD-202ENST00000473112 FHAD1B1AJZ9 1412 aa23.84■■□□□ 1.41
IVD-202ENST00000473112 RUSC2Q8N2Y8 1516 aa23.81■■□□□ 1.4
IVD-202ENST00000473112 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
IVD-202ENST00000473112 IGF1RP08069 1367 aa23.8■■□□□ 1.4
IVD-202ENST00000473112 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
IVD-202ENST00000473112 CEP170Q5SW79 1584 aa23.73■■□□□ 1.39
IVD-202ENST00000473112 NUP160Q12769 1436 aa23.7■■□□□ 1.38
IVD-202ENST00000473112 ERCC6L2Q5T890 1561 aa23.65■■□□□ 1.38
IVD-202ENST00000473112 CARMIL1Q5VZK9 1371 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms