RNA–Protein interactions for RNA: ENST00000472961.1

CFHR1-204, Transcript of complement factor H related 1, humanhuman

TSL 1 (best)

Gene CFHR1, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-204ENST00000472961 NISCHQ9Y2I1 1504 aa16.47■□□□□ 0.23
CFHR1-204ENST00000472961 ABCC9O60706 1549 aa15.3■□□□□ 0.04
CFHR1-204ENST00000472961 CCDC180Q9P1Z9 1646 aa15.02□□□□□ -0.01
CFHR1-204ENST00000472961 DNAJC5BQ9UF47 199 aa14.75□□□□□ -0.05
CFHR1-204ENST00000472961 UNC13AQ9UPW8 1703 aa14.38□□□□□ -0.11
CFHR1-204ENST00000472961 RB1CC1Q8TDY2 1594 aa14.36□□□□□ -0.11
CFHR1-204ENST00000472961 NACADO15069 1562 aa14.17□□□□□ -0.14
CFHR1-204ENST00000472961 BICRAQ9NZM4 1560 aa14.15□□□□□ -0.14
CFHR1-204ENST00000472961 PABPN1Q86U42 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
CFHR1-204ENST00000472961 CC2D2AQ9P2K1 1620 aa13.87□□□□□ -0.19
CFHR1-204ENST00000472961 MYO15BQ96JP2 1530 aa13.85□□□□□ -0.19
CFHR1-204ENST00000472961 DCAF8L2P0C7V8 631 aa13.83□□□□□ -0.2
CFHR1-204ENST00000472961 CECR2Q9BXF3 1484 aa13.77□□□□□ -0.21
CFHR1-204ENST00000472961 EIF4G1Q04637 1599 aaKnown RBP13.72□□□□□ -0.21
CFHR1-204ENST00000472961 SHROOM4Q9ULL8 1493 aa13.67□□□□□ -0.22
CFHR1-204ENST00000472961 SCRIBQ14160 1630 aa13.66□□□□□ -0.22
CFHR1-204ENST00000472961 DNAJC5Q9H3Z4 198 aa13.65□□□□□ -0.22
CFHR1-204ENST00000472961 ZCCHC6Q5VYS8 1495 aaKnown RBP13.6□□□□□ -0.23
CFHR1-204ENST00000472961 DCAF1Q9Y4B6 1507 aa13.55□□□□□ -0.24
CFHR1-204ENST00000472961 CUX2O14529 1486 aa13.26□□□□□ -0.29
CFHR1-204ENST00000472961 THOC2Q8NI27 1593 aaKnown RBP13.11□□□□□ -0.31
CFHR1-204ENST00000472961 NESP48681 1621 aa13.11□□□□□ -0.31
CFHR1-204ENST00000472961 ERCC6Q03468 1493 aa13.1□□□□□ -0.31
CFHR1-204ENST00000472961 NCAPD3P42695 1498 aa13.07□□□□□ -0.32
CFHR1-204ENST00000472961 KIF21AQ7Z4S6 1674 aa13.04□□□□□ -0.32
CFHR1-204ENST00000472961 ATAD2BQ9ULI0 1458 aa13.02□□□□□ -0.33
CFHR1-204ENST00000472961 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
CFHR1-204ENST00000472961 HMGXB3Q12766 1538 aa12.99□□□□□ -0.33
CFHR1-204ENST00000472961 SMARCA2P51531 1590 aa12.92□□□□□ -0.34
CFHR1-204ENST00000472961 LAMC3Q9Y6N6 1575 aa12.88□□□□□ -0.35
CFHR1-204ENST00000472961 TRIM41Q8WV44 630 aa12.86□□□□□ -0.35
CFHR1-204ENST00000472961 PEG3Q9GZU2 1588 aa12.86□□□□□ -0.35
CFHR1-204ENST00000472961 BAZ1BQ9UIG0 1483 aaKnown RBP12.82□□□□□ -0.36
CFHR1-204ENST00000472961 BAZ1AQ9NRL2 1556 aaPredicted RBP12.77□□□□□ -0.36
CFHR1-204ENST00000472961 WDR62O43379 1518 aa12.75□□□□□ -0.37
CFHR1-204ENST00000472961 MROH2BQ7Z745 1585 aa12.75□□□□□ -0.37
CFHR1-204ENST00000472961 MRC2Q9UBG0 1479 aa12.69□□□□□ -0.38
CFHR1-204ENST00000472961 PDS5BQ9NTI5 1447 aa12.67□□□□□ -0.38
CFHR1-204ENST00000472961 WIZO95785 1651 aa12.64□□□□□ -0.39
CFHR1-204ENST00000472961 RIMBP3CA6NJZ7 1639 aa12.63□□□□□ -0.39
CFHR1-204ENST00000472961 RIMBP3BA6NNM3 1639 aa12.63□□□□□ -0.39
CFHR1-204ENST00000472961 RIMBP3Q9UFD9 1639 aa12.63□□□□□ -0.39
CFHR1-204ENST00000472961 CADPSQ9ULU8 1353 aa12.61□□□□□ -0.39
CFHR1-204ENST00000472961 CEP164Q9UPV0 1460 aa12.54□□□□□ -0.4
CFHR1-204ENST00000472961 URB2Q14146 1524 aaKnown RBP12.53□□□□□ -0.4
CFHR1-204ENST00000472961 PRDM2Q13029 1718 aa12.52□□□□□ -0.41
CFHR1-204ENST00000472961 FANCD2Q9BXW9 1451 aa12.52□□□□□ -0.41
CFHR1-204ENST00000472961 ARHGEF11O15085 1522 aa12.47□□□□□ -0.41
CFHR1-204ENST00000472961 OSCARQ8IYS5 282 aa12.47□□□□□ -0.41
CFHR1-204ENST00000472961 CFTRP13569 1480 aa12.46□□□□□ -0.42
CFHR1-204ENST00000472961 ZNF608Q9ULD9 1512 aaPredicted RBP12.44□□□□□ -0.42
CFHR1-204ENST00000472961 CHD1O14646 1710 aa12.44□□□□□ -0.42
CFHR1-204ENST00000472961 EIF4G3O43432 1585 aaKnown RBP12.39□□□□□ -0.43
CFHR1-204ENST00000472961 ARAP1Q96P48 1450 aa12.35□□□□□ -0.43
CFHR1-204ENST00000472961 TOP2AP11388 1531 aaKnown RBP12.34□□□□□ -0.43
CFHR1-204ENST00000472961 TARBP1Q13395 1621 aaKnown RBP12.31□□□□□ -0.44
CFHR1-204ENST00000472961 TOPBP1Q92547 1522 aa12.29□□□□□ -0.44
CFHR1-204ENST00000472961 IFT140Q96RY7 1462 aa12.28□□□□□ -0.44
CFHR1-204ENST00000472961 RSF1Q96T23 1441 aaPredicted RBP12.27□□□□□ -0.45
CFHR1-204ENST00000472961 CYB5RLQ6IPT4 315 aa12.25□□□□□ -0.45
CFHR1-204ENST00000472961 DNMBPQ6XZF7 1577 aa12.22□□□□□ -0.45
CFHR1-204ENST00000472961 AQRO60306 1485 aaKnown RBP eCLIP12.21□□□□□ -0.45
CFHR1-204ENST00000472961 CLASP1Q7Z460 1538 aa12.2□□□□□ -0.46
CFHR1-204ENST00000472961 CCDC88BA6NC98 1476 aa12.2□□□□□ -0.46
CFHR1-204ENST00000472961 TRHP20396 242 aaPredicted RBP12.16□□□□□ -0.46
CFHR1-204ENST00000472961 POLA1P09884 1462 aaPredicted RBP12.14□□□□□ -0.47
CFHR1-204ENST00000472961 WDR97A6NE52 1622 aa12.12□□□□□ -0.47
CFHR1-204ENST00000472961 RAD54L2Q9Y4B4 1467 aa12.12□□□□□ -0.47
CFHR1-204ENST00000472961 ABCC8Q09428 1581 aa12.09□□□□□ -0.47
CFHR1-204ENST00000472961 SNAPC4Q5SXM2 1469 aa12.08□□□□□ -0.47
CFHR1-204ENST00000472961 PBRM1Q86U86 1689 aa12.07□□□□□ -0.48
CFHR1-204ENST00000472961 KIF13AQ9H1H9 1805 aa12.07□□□□□ -0.48
CFHR1-204ENST00000472961 ERCC6L2Q5T890 1561 aa12.06□□□□□ -0.48
CFHR1-204ENST00000472961 SYNJ1O43426 1573 aa12.04□□□□□ -0.48
CFHR1-204ENST00000472961 FBLN2P98095 1184 aa12.03□□□□□ -0.48
CFHR1-204ENST00000472961 TDRD9Q8NDG6 1382 aaKnown RBP12.03□□□□□ -0.48
CFHR1-204ENST00000472961 AEBP2Q6ZN18 517 aaPredicted RBP12□□□□□ -0.49
CFHR1-204ENST00000472961 FGD5Q6ZNL6 1462 aa12□□□□□ -0.49
CFHR1-204ENST00000472961 CUX1P39880 1505 aa12□□□□□ -0.49
CFHR1-204ENST00000472961 MAGI1Q96QZ7 1491 aaPredicted RBP11.98□□□□□ -0.49
CFHR1-204ENST00000472961 GAPVD1Q14C86 1478 aa11.97□□□□□ -0.49
CFHR1-204ENST00000472961 SOGA1O94964 1423 aa11.97□□□□□ -0.49
CFHR1-204ENST00000472961 ABCA5Q8WWZ7 1642 aa11.96□□□□□ -0.5
CFHR1-204ENST00000472961 SYNJ2O15056 1496 aa11.95□□□□□ -0.5
CFHR1-204ENST00000472961 GRIN2BQ13224 1484 aa11.92□□□□□ -0.5
CFHR1-204ENST00000472961 SHROOM2Q13796 1616 aa11.92□□□□□ -0.5
CFHR1-204ENST00000472961 CEP170Q5SW79 1584 aa11.91□□□□□ -0.5
CFHR1-204ENST00000472961 CHMP7Q8WUX9 453 aaPredicted RBP11.87□□□□□ -0.51
CFHR1-204ENST00000472961 ADAMTS12P58397 1594 aa11.86□□□□□ -0.51
CFHR1-204ENST00000472961 ABCA10Q8WWZ4 1543 aa11.83□□□□□ -0.52
CFHR1-204ENST00000472961 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
CFHR1-204ENST00000472961 NUP160Q12769 1436 aa11.81□□□□□ -0.52
CFHR1-204ENST00000472961 TSPOAP1O95153 1857 aa11.79□□□□□ -0.52
CFHR1-204ENST00000472961 DIP2BQ9P265 1576 aa11.78□□□□□ -0.52
CFHR1-204ENST00000472961 ADCY10Q96PN6 1610 aa11.75□□□□□ -0.53
CFHR1-204ENST00000472961 BIVM-ERCC5R4GMW8 1640 aa11.75□□□□□ -0.53
CFHR1-204ENST00000472961 KDM4FA0A1W2PPD8 638 aa11.74□□□□□ -0.53
CFHR1-204ENST00000472961 RUSC2Q8N2Y8 1516 aa11.73□□□□□ -0.53
CFHR1-204ENST00000472961 PPRC1Q5VV67 1664 aaKnown RBP11.72□□□□□ -0.53
CFHR1-204ENST00000472961 ILDR1Q86SU0 546 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms