RNA–Protein interactions for RNA: ENST00000472955.1

PPM1M-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1M, humanhuman

TSL 3

Gene PPM1M, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1M-207ENST00000472955 NISCHQ9Y2I1 1504 aa44.37■■■■■ 4.69
PPM1M-207ENST00000472955 CCDC180Q9P1Z9 1646 aa39.7■■■■□ 3.95
PPM1M-207ENST00000472955 ABCC9O60706 1549 aa39.49■■■■□ 3.91
PPM1M-207ENST00000472955 RB1CC1Q8TDY2 1594 aa37.66■■■■□ 3.62
PPM1M-207ENST00000472955 NACADO15069 1562 aa37.45■■■■□ 3.59
PPM1M-207ENST00000472955 DCAF8L2P0C7V8 631 aa37.38■■■■□ 3.57
PPM1M-207ENST00000472955 MYO15BQ96JP2 1530 aa36.98■■■■□ 3.51
PPM1M-207ENST00000472955 UNC13AQ9UPW8 1703 aa36.85■■■■□ 3.49
PPM1M-207ENST00000472955 ZCCHC6Q5VYS8 1495 aaKnown RBP36.85■■■■□ 3.49
PPM1M-207ENST00000472955 PABPN1Q86U42 306 aaKnown RBP eCLIP36.8■■■■□ 3.48
PPM1M-207ENST00000472955 DNAJC5BQ9UF47 199 aa36.75■■■■□ 3.47
PPM1M-207ENST00000472955 DCAF1Q9Y4B6 1507 aa36.62■■■■□ 3.45
PPM1M-207ENST00000472955 BICRAQ9NZM4 1560 aa36.56■■■■□ 3.44
PPM1M-207ENST00000472955 SCRIBQ14160 1630 aa36.26■■■■□ 3.4
PPM1M-207ENST00000472955 SHROOM4Q9ULL8 1493 aa36.04■■■■□ 3.36
PPM1M-207ENST00000472955 CC2D2AQ9P2K1 1620 aa35.67■■■■□ 3.3
PPM1M-207ENST00000472955 EIF4G1Q04637 1599 aaKnown RBP35.65■■■■□ 3.3
PPM1M-207ENST00000472955 CECR2Q9BXF3 1484 aa35.52■■■■□ 3.28
PPM1M-207ENST00000472955 SMARCA4P51532 1647 aa34.58■■■■□ 3.13
PPM1M-207ENST00000472955 NCAPD3P42695 1498 aa34.55■■■■□ 3.12
PPM1M-207ENST00000472955 ATAD2BQ9ULI0 1458 aa34.52■■■■□ 3.12
PPM1M-207ENST00000472955 SMARCA2P51531 1590 aa34.44■■■■□ 3.1
PPM1M-207ENST00000472955 BAZ1AQ9NRL2 1556 aaPredicted RBP34.43■■■■□ 3.1
PPM1M-207ENST00000472955 HMGXB3Q12766 1538 aa34.35■■■■□ 3.09
PPM1M-207ENST00000472955 BAZ1BQ9UIG0 1483 aaKnown RBP34.22■■■■□ 3.07
PPM1M-207ENST00000472955 MROH2BQ7Z745 1585 aa34.22■■■■□ 3.07
PPM1M-207ENST00000472955 PEG3Q9GZU2 1588 aa34.2■■■■□ 3.07
PPM1M-207ENST00000472955 ERCC6Q03468 1493 aa34.07■■■■□ 3.04
PPM1M-207ENST00000472955 NESP48681 1621 aa34■■■■□ 3.03
PPM1M-207ENST00000472955 CUX2O14529 1486 aa33.86■■■■□ 3.01
PPM1M-207ENST00000472955 WIZO95785 1651 aa33.84■■■■□ 3.01
PPM1M-207ENST00000472955 LAMC3Q9Y6N6 1575 aa33.77■■■■□ 3
PPM1M-207ENST00000472955 THOC2Q8NI27 1593 aaKnown RBP33.6■■■□□ 2.97
PPM1M-207ENST00000472955 KIF21AQ7Z4S6 1674 aa33.58■■■□□ 2.97
PPM1M-207ENST00000472955 RSF1Q96T23 1441 aaPredicted RBP33.58■■■□□ 2.97
PPM1M-207ENST00000472955 PDS5BQ9NTI5 1447 aa33.54■■■□□ 2.96
PPM1M-207ENST00000472955 CADPSQ9ULU8 1353 aa33.53■■■□□ 2.96
PPM1M-207ENST00000472955 DNAJC5Q9H3Z4 198 aa33.5■■■□□ 2.95
PPM1M-207ENST00000472955 TOP2AP11388 1531 aaKnown RBP33.42■■■□□ 2.94
PPM1M-207ENST00000472955 MRC2Q9UBG0 1479 aa33.27■■■□□ 2.92
PPM1M-207ENST00000472955 CFTRP13569 1480 aa33.21■■■□□ 2.91
PPM1M-207ENST00000472955 CEP164Q9UPV0 1460 aa33.2■■■□□ 2.91
PPM1M-207ENST00000472955 FANCD2Q9BXW9 1451 aa33.18■■■□□ 2.9
PPM1M-207ENST00000472955 WDR62O43379 1518 aa33.18■■■□□ 2.9
PPM1M-207ENST00000472955 CCDC88BA6NC98 1476 aa33.02■■■□□ 2.88
PPM1M-207ENST00000472955 PRDM2Q13029 1718 aa32.95■■■□□ 2.87
PPM1M-207ENST00000472955 URB2Q14146 1524 aaKnown RBP32.9■■■□□ 2.86
PPM1M-207ENST00000472955 TOPBP1Q92547 1522 aa32.59■■■□□ 2.81
PPM1M-207ENST00000472955 IFT140Q96RY7 1462 aa32.51■■■□□ 2.79
PPM1M-207ENST00000472955 DNMBPQ6XZF7 1577 aa32.49■■■□□ 2.79
PPM1M-207ENST00000472955 ABCC8Q09428 1581 aa32.49■■■□□ 2.79
PPM1M-207ENST00000472955 ZNF608Q9ULD9 1512 aaPredicted RBP32.46■■■□□ 2.79
PPM1M-207ENST00000472955 SUPT5HO00267 1087 aaKnown RBP32.36■■■□□ 2.77
PPM1M-207ENST00000472955 OSCARQ8IYS5 282 aa32.34■■■□□ 2.77
PPM1M-207ENST00000472955 EIF4G3O43432 1585 aaKnown RBP32.32■■■□□ 2.76
PPM1M-207ENST00000472955 POLA1P09884 1462 aaPredicted RBP32.28■■■□□ 2.76
PPM1M-207ENST00000472955 TARBP1Q13395 1621 aaKnown RBP32.27■■■□□ 2.76
PPM1M-207ENST00000472955 TRIM41Q8WV44 630 aa32.25■■■□□ 2.75
PPM1M-207ENST00000472955 AQRO60306 1485 aaKnown RBP eCLIP32.19■■■□□ 2.74
PPM1M-207ENST00000472955 RAD54L2Q9Y4B4 1467 aa32.17■■■□□ 2.74
PPM1M-207ENST00000472955 CUX1P39880 1505 aa32.14■■■□□ 2.74
PPM1M-207ENST00000472955 FGD5Q6ZNL6 1462 aa32.13■■■□□ 2.73
PPM1M-207ENST00000472955 SOGA1O94964 1423 aa32.11■■■□□ 2.73
PPM1M-207ENST00000472955 TDRD9Q8NDG6 1382 aaKnown RBP32.04■■■□□ 2.72
PPM1M-207ENST00000472955 CHD1O14646 1710 aa32.03■■■□□ 2.72
PPM1M-207ENST00000472955 RIMBP3CA6NJZ7 1639 aa31.96■■■□□ 2.71
PPM1M-207ENST00000472955 RIMBP3BA6NNM3 1639 aa31.96■■■□□ 2.71
PPM1M-207ENST00000472955 RIMBP3Q9UFD9 1639 aa31.96■■■□□ 2.71
PPM1M-207ENST00000472955 FBLN2P98095 1184 aa31.94■■■□□ 2.7
PPM1M-207ENST00000472955 WDR97A6NE52 1622 aa31.93■■■□□ 2.7
PPM1M-207ENST00000472955 SNAPC4Q5SXM2 1469 aa31.9■■■□□ 2.7
PPM1M-207ENST00000472955 ARHGEF11O15085 1522 aa31.88■■■□□ 2.69
PPM1M-207ENST00000472955 GRIN2BQ13224 1484 aa31.81■■■□□ 2.68
PPM1M-207ENST00000472955 MAGI1Q96QZ7 1491 aaPredicted RBP31.78■■■□□ 2.68
PPM1M-207ENST00000472955 PBRM1Q86U86 1689 aa31.75■■■□□ 2.67
PPM1M-207ENST00000472955 ABCA10Q8WWZ4 1543 aa31.75■■■□□ 2.67
PPM1M-207ENST00000472955 GAPVD1Q14C86 1478 aa31.74■■■□□ 2.67
PPM1M-207ENST00000472955 CHMP7Q8WUX9 453 aaPredicted RBP31.72■■■□□ 2.67
PPM1M-207ENST00000472955 WRNQ14191 1432 aaPredicted RBP eCLIP31.7■■■□□ 2.67
PPM1M-207ENST00000472955 ABCA5Q8WWZ7 1642 aa31.7■■■□□ 2.66
PPM1M-207ENST00000472955 BIVM-ERCC5R4GMW8 1640 aa31.69■■■□□ 2.66
PPM1M-207ENST00000472955 SYNJ1O43426 1573 aa31.68■■■□□ 2.66
PPM1M-207ENST00000472955 TOP2BQ02880 1626 aa31.68■■■□□ 2.66
PPM1M-207ENST00000472955 SYNJ2O15056 1496 aa31.67■■■□□ 2.66
PPM1M-207ENST00000472955 CLASP1Q7Z460 1538 aa31.63■■■□□ 2.65
PPM1M-207ENST00000472955 CYB5RLQ6IPT4 315 aa31.61■■■□□ 2.65
PPM1M-207ENST00000472955 ARAP1Q96P48 1450 aa31.59■■■□□ 2.65
PPM1M-207ENST00000472955 ADAMTS12P58397 1594 aa31.46■■■□□ 2.63
PPM1M-207ENST00000472955 GRIN2AQ12879 1464 aa31.41■■■□□ 2.62
PPM1M-207ENST00000472955 ERICH3Q5RHP9 1530 aa31.35■■■□□ 2.61
PPM1M-207ENST00000472955 FHAD1B1AJZ9 1412 aa31.33■■■□□ 2.61
PPM1M-207ENST00000472955 CEP170Q5SW79 1584 aa31.31■■■□□ 2.6
PPM1M-207ENST00000472955 NUP160Q12769 1436 aa31.28■■■□□ 2.6
PPM1M-207ENST00000472955 ERCC6L2Q5T890 1561 aa31.2■■■□□ 2.58
PPM1M-207ENST00000472955 TRHP20396 242 aaPredicted RBP31.19■■■□□ 2.58
PPM1M-207ENST00000472955 SHROOM2Q13796 1616 aa31.12■■■□□ 2.57
PPM1M-207ENST00000472955 KIF27Q86VH2 1401 aa31.07■■■□□ 2.56
PPM1M-207ENST00000472955 RUSC2Q8N2Y8 1516 aa31.02■■■□□ 2.56
PPM1M-207ENST00000472955 IGF1RP08069 1367 aa31■■■□□ 2.55
PPM1M-207ENST00000472955 CUL7Q14999 1698 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms