RNA–Protein interactions for RNA: ENST00000472864.1

RASGEF1A-205, Transcript of RasGEF domain family member 1A, humanhuman

TSL 3

Gene RASGEF1A, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1A-205ENST00000472864 NISCHQ9Y2I1 1504 aa35.75■■■■□ 3.31
RASGEF1A-205ENST00000472864 CCDC180Q9P1Z9 1646 aa31.96■■■□□ 2.71
RASGEF1A-205ENST00000472864 ABCC9O60706 1549 aa31.46■■■□□ 2.63
RASGEF1A-205ENST00000472864 RB1CC1Q8TDY2 1594 aa30.18■■■□□ 2.42
RASGEF1A-205ENST00000472864 NACADO15069 1562 aa30.07■■■□□ 2.4
RASGEF1A-205ENST00000472864 DCAF8L2P0C7V8 631 aa29.89■■■□□ 2.38
RASGEF1A-205ENST00000472864 MYO15BQ96JP2 1530 aa29.81■■■□□ 2.36
RASGEF1A-205ENST00000472864 ZCCHC6Q5VYS8 1495 aaKnown RBP29.72■■■□□ 2.35
RASGEF1A-205ENST00000472864 UNC13AQ9UPW8 1703 aa29.6■■■□□ 2.33
RASGEF1A-205ENST00000472864 DCAF1Q9Y4B6 1507 aa29.58■■■□□ 2.33
RASGEF1A-205ENST00000472864 PABPN1Q86U42 306 aaKnown RBP eCLIP29.32■■■□□ 2.28
RASGEF1A-205ENST00000472864 BICRAQ9NZM4 1560 aa29.3■■■□□ 2.28
RASGEF1A-205ENST00000472864 DNAJC5BQ9UF47 199 aa29.14■■■□□ 2.26
RASGEF1A-205ENST00000472864 SCRIBQ14160 1630 aa29.09■■■□□ 2.25
RASGEF1A-205ENST00000472864 SHROOM4Q9ULL8 1493 aa28.94■■■□□ 2.22
RASGEF1A-205ENST00000472864 EIF4G1Q04637 1599 aaKnown RBP28.53■■■□□ 2.16
RASGEF1A-205ENST00000472864 CC2D2AQ9P2K1 1620 aa28.5■■■□□ 2.15
RASGEF1A-205ENST00000472864 CECR2Q9BXF3 1484 aa28.3■■■□□ 2.12
RASGEF1A-205ENST00000472864 SMARCA4P51532 1647 aa27.81■■■□□ 2.04
RASGEF1A-205ENST00000472864 NCAPD3P42695 1498 aa27.74■■■□□ 2.03
RASGEF1A-205ENST00000472864 BAZ1AQ9NRL2 1556 aaPredicted RBP27.73■■■□□ 2.03
RASGEF1A-205ENST00000472864 ATAD2BQ9ULI0 1458 aa27.7■■■□□ 2.03
RASGEF1A-205ENST00000472864 SMARCA2P51531 1590 aa27.68■■■□□ 2.02
RASGEF1A-205ENST00000472864 HMGXB3Q12766 1538 aa27.59■■■□□ 2.01
RASGEF1A-205ENST00000472864 PEG3Q9GZU2 1588 aa27.56■■■□□ 2
RASGEF1A-205ENST00000472864 MROH2BQ7Z745 1585 aa27.54■■■□□ 2
RASGEF1A-205ENST00000472864 BAZ1BQ9UIG0 1483 aaKnown RBP27.45■■□□□ 1.99
RASGEF1A-205ENST00000472864 WIZO95785 1651 aa27.27■■□□□ 1.96
RASGEF1A-205ENST00000472864 NESP48681 1621 aa27.16■■□□□ 1.94
RASGEF1A-205ENST00000472864 ERCC6Q03468 1493 aa27.13■■□□□ 1.93
RASGEF1A-205ENST00000472864 RSF1Q96T23 1441 aaPredicted RBP27.11■■□□□ 1.93
RASGEF1A-205ENST00000472864 LAMC3Q9Y6N6 1575 aa27.08■■□□□ 1.93
RASGEF1A-205ENST00000472864 CUX2O14529 1486 aa26.97■■□□□ 1.91
RASGEF1A-205ENST00000472864 TOP2AP11388 1531 aaKnown RBP26.92■■□□□ 1.9
RASGEF1A-205ENST00000472864 KIF21AQ7Z4S6 1674 aa26.9■■□□□ 1.9
RASGEF1A-205ENST00000472864 CADPSQ9ULU8 1353 aa26.89■■□□□ 1.9
RASGEF1A-205ENST00000472864 PDS5BQ9NTI5 1447 aa26.86■■□□□ 1.89
RASGEF1A-205ENST00000472864 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
RASGEF1A-205ENST00000472864 CFTRP13569 1480 aa26.69■■□□□ 1.86
RASGEF1A-205ENST00000472864 MRC2Q9UBG0 1479 aa26.61■■□□□ 1.85
RASGEF1A-205ENST00000472864 CCDC88BA6NC98 1476 aa26.6■■□□□ 1.85
RASGEF1A-205ENST00000472864 FANCD2Q9BXW9 1451 aa26.6■■□□□ 1.85
RASGEF1A-205ENST00000472864 CEP164Q9UPV0 1460 aa26.59■■□□□ 1.85
RASGEF1A-205ENST00000472864 PRDM2Q13029 1718 aa26.59■■□□□ 1.85
RASGEF1A-205ENST00000472864 WDR62O43379 1518 aa26.55■■□□□ 1.84
RASGEF1A-205ENST00000472864 DNAJC5Q9H3Z4 198 aa26.46■■□□□ 1.83
RASGEF1A-205ENST00000472864 URB2Q14146 1524 aaKnown RBP26.36■■□□□ 1.81
RASGEF1A-205ENST00000472864 TOPBP1Q92547 1522 aa26.15■■□□□ 1.78
RASGEF1A-205ENST00000472864 SUPT5HO00267 1087 aaKnown RBP26.15■■□□□ 1.78
RASGEF1A-205ENST00000472864 ABCC8Q09428 1581 aa26.13■■□□□ 1.77
RASGEF1A-205ENST00000472864 DNMBPQ6XZF7 1577 aa26.11■■□□□ 1.77
RASGEF1A-205ENST00000472864 IFT140Q96RY7 1462 aa26.04■■□□□ 1.76
RASGEF1A-205ENST00000472864 ZNF608Q9ULD9 1512 aaPredicted RBP25.96■■□□□ 1.75
RASGEF1A-205ENST00000472864 TARBP1Q13395 1621 aaKnown RBP25.92■■□□□ 1.74
RASGEF1A-205ENST00000472864 POLA1P09884 1462 aaPredicted RBP25.91■■□□□ 1.74
RASGEF1A-205ENST00000472864 EIF4G3O43432 1585 aaKnown RBP25.87■■□□□ 1.73
RASGEF1A-205ENST00000472864 CUX1P39880 1505 aa25.86■■□□□ 1.73
RASGEF1A-205ENST00000472864 FGD5Q6ZNL6 1462 aa25.79■■□□□ 1.72
RASGEF1A-205ENST00000472864 RAD54L2Q9Y4B4 1467 aa25.79■■□□□ 1.72
RASGEF1A-205ENST00000472864 SOGA1O94964 1423 aa25.78■■□□□ 1.72
RASGEF1A-205ENST00000472864 OSCARQ8IYS5 282 aa25.77■■□□□ 1.72
RASGEF1A-205ENST00000472864 AQRO60306 1485 aaKnown RBP eCLIP25.76■■□□□ 1.718e-7■■■■■ 32.1
RASGEF1A-205ENST00000472864 WDR97A6NE52 1622 aa25.7■■□□□ 1.7
RASGEF1A-205ENST00000472864 TDRD9Q8NDG6 1382 aaKnown RBP25.66■■□□□ 1.7
RASGEF1A-205ENST00000472864 CHD1O14646 1710 aa25.64■■□□□ 1.7
RASGEF1A-205ENST00000472864 BIVM-ERCC5R4GMW8 1640 aa25.6■■□□□ 1.69
RASGEF1A-205ENST00000472864 TOP2BQ02880 1626 aa25.58■■□□□ 1.69
RASGEF1A-205ENST00000472864 WRNQ14191 1432 aaPredicted RBP eCLIP25.55■■□□□ 1.68
RASGEF1A-205ENST00000472864 SYNJ1O43426 1573 aa25.55■■□□□ 1.68
RASGEF1A-205ENST00000472864 ABCA10Q8WWZ4 1543 aa25.54■■□□□ 1.68
RASGEF1A-205ENST00000472864 PBRM1Q86U86 1689 aa25.52■■□□□ 1.68
RASGEF1A-205ENST00000472864 GRIN2BQ13224 1484 aa25.52■■□□□ 1.68
RASGEF1A-205ENST00000472864 SNAPC4Q5SXM2 1469 aa25.52■■□□□ 1.68
RASGEF1A-205ENST00000472864 ABCA5Q8WWZ7 1642 aa25.5■■□□□ 1.67
RASGEF1A-205ENST00000472864 MAGI1Q96QZ7 1491 aaPredicted RBP25.49■■□□□ 1.67
RASGEF1A-205ENST00000472864 GAPVD1Q14C86 1478 aa25.48■■□□□ 1.67
RASGEF1A-205ENST00000472864 FBLN2P98095 1184 aa25.47■■□□□ 1.67
RASGEF1A-205ENST00000472864 RIMBP3CA6NJZ7 1639 aa25.45■■□□□ 1.67
RASGEF1A-205ENST00000472864 RIMBP3BA6NNM3 1639 aa25.45■■□□□ 1.67
RASGEF1A-205ENST00000472864 RIMBP3Q9UFD9 1639 aa25.45■■□□□ 1.67
RASGEF1A-205ENST00000472864 TRIM41Q8WV44 630 aa25.43■■□□□ 1.66
RASGEF1A-205ENST00000472864 ARHGEF11O15085 1522 aa25.39■■□□□ 1.66
RASGEF1A-205ENST00000472864 SYNJ2O15056 1496 aa25.39■■□□□ 1.65
RASGEF1A-205ENST00000472864 CHMP7Q8WUX9 453 aaPredicted RBP25.37■■□□□ 1.65
RASGEF1A-205ENST00000472864 CLASP1Q7Z460 1538 aa25.32■■□□□ 1.64
RASGEF1A-205ENST00000472864 ADAMTS12P58397 1594 aa25.26■■□□□ 1.63
RASGEF1A-205ENST00000472864 ERICH3Q5RHP9 1530 aa25.24■■□□□ 1.63
RASGEF1A-205ENST00000472864 GRIN2AQ12879 1464 aa25.2■■□□□ 1.62
RASGEF1A-205ENST00000472864 FHAD1B1AJZ9 1412 aa25.17■■□□□ 1.62
RASGEF1A-205ENST00000472864 ARAP1Q96P48 1450 aa25.16■■□□□ 1.62
RASGEF1A-205ENST00000472864 CYB5RLQ6IPT4 315 aa25.13■■□□□ 1.61
RASGEF1A-205ENST00000472864 CEP170Q5SW79 1584 aa25.1■■□□□ 1.61
RASGEF1A-205ENST00000472864 NUP160Q12769 1436 aa25.1■■□□□ 1.61
RASGEF1A-205ENST00000472864 KIF27Q86VH2 1401 aa25.03■■□□□ 1.6
RASGEF1A-205ENST00000472864 SHROOM2Q13796 1616 aa24.99■■□□□ 1.59
RASGEF1A-205ENST00000472864 CUL7Q14999 1698 aa24.98■■□□□ 1.59
RASGEF1A-205ENST00000472864 IGF1RP08069 1367 aa24.98■■□□□ 1.59
RASGEF1A-205ENST00000472864 ERCC6L2Q5T890 1561 aa24.93■■□□□ 1.58
RASGEF1A-205ENST00000472864 RUSC2Q8N2Y8 1516 aa24.9■■□□□ 1.58
RASGEF1A-205ENST00000472864 JPH4Q96JJ6 628 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms