RNA–Protein interactions for RNA: ENST00000472804.1

TNFSF10-205, Transcript of TNF superfamily member 10, humanhuman

TSL 2

Gene TNFSF10, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF10-205ENST00000472804 NISCHQ9Y2I1 1504 aa33.49■■■□□ 2.95
TNFSF10-205ENST00000472804 ABCC9O60706 1549 aa30.13■■■□□ 2.41
TNFSF10-205ENST00000472804 CCDC180Q9P1Z9 1646 aa30.11■■■□□ 2.41
TNFSF10-205ENST00000472804 RB1CC1Q8TDY2 1594 aa28.71■■■□□ 2.19
TNFSF10-205ENST00000472804 NACADO15069 1562 aa28.5■■■□□ 2.15
TNFSF10-205ENST00000472804 DCAF8L2P0C7V8 631 aa28.33■■■□□ 2.13
TNFSF10-205ENST00000472804 DNAJC5BQ9UF47 199 aa28.28■■■□□ 2.12
TNFSF10-205ENST00000472804 MYO15BQ96JP2 1530 aa28.1■■■□□ 2.09
TNFSF10-205ENST00000472804 PABPN1Q86U42 306 aaKnown RBP eCLIP28.04■■■□□ 2.08
TNFSF10-205ENST00000472804 UNC13AQ9UPW8 1703 aa27.95■■■□□ 2.06
TNFSF10-205ENST00000472804 BICRAQ9NZM4 1560 aa27.79■■■□□ 2.04
TNFSF10-205ENST00000472804 ZCCHC6Q5VYS8 1495 aaKnown RBP27.73■■■□□ 2.03
TNFSF10-205ENST00000472804 DCAF1Q9Y4B6 1507 aa27.69■■■□□ 2.02
TNFSF10-205ENST00000472804 SHROOM4Q9ULL8 1493 aa27.54■■■□□ 2
TNFSF10-205ENST00000472804 SCRIBQ14160 1630 aa27.38■■□□□ 1.97
TNFSF10-205ENST00000472804 CC2D2AQ9P2K1 1620 aa27.22■■□□□ 1.95
TNFSF10-205ENST00000472804 CECR2Q9BXF3 1484 aa27.19■■□□□ 1.94
TNFSF10-205ENST00000472804 EIF4G1Q04637 1599 aaKnown RBP27.16■■□□□ 1.94
TNFSF10-205ENST00000472804 NCAPD3P42695 1498 aa26.3■■□□□ 1.8
TNFSF10-205ENST00000472804 ATAD2BQ9ULI0 1458 aa26.18■■□□□ 1.78
TNFSF10-205ENST00000472804 SMARCA2P51531 1590 aa26.15■■□□□ 1.78
TNFSF10-205ENST00000472804 SMARCA4P51532 1647 aa26.13■■□□□ 1.77
TNFSF10-205ENST00000472804 DNAJC5Q9H3Z4 198 aa26.11■■□□□ 1.77
TNFSF10-205ENST00000472804 HMGXB3Q12766 1538 aa26.09■■□□□ 1.77
TNFSF10-205ENST00000472804 ERCC6Q03468 1493 aa26.09■■□□□ 1.77
TNFSF10-205ENST00000472804 CUX2O14529 1486 aa26.06■■□□□ 1.76
TNFSF10-205ENST00000472804 BAZ1AQ9NRL2 1556 aaPredicted RBP26.03■■□□□ 1.76
TNFSF10-205ENST00000472804 BAZ1BQ9UIG0 1483 aaKnown RBP25.96■■□□□ 1.75
TNFSF10-205ENST00000472804 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
TNFSF10-205ENST00000472804 NESP48681 1621 aa25.83■■□□□ 1.73
TNFSF10-205ENST00000472804 MROH2BQ7Z745 1585 aa25.77■■□□□ 1.72
TNFSF10-205ENST00000472804 LAMC3Q9Y6N6 1575 aa25.73■■□□□ 1.71
TNFSF10-205ENST00000472804 PDS5BQ9NTI5 1447 aa25.61■■□□□ 1.69
TNFSF10-205ENST00000472804 THOC2Q8NI27 1593 aaKnown RBP25.61■■□□□ 1.69
TNFSF10-205ENST00000472804 KIF21AQ7Z4S6 1674 aa25.51■■□□□ 1.67
TNFSF10-205ENST00000472804 CADPSQ9ULU8 1353 aa25.5■■□□□ 1.67
TNFSF10-205ENST00000472804 WIZO95785 1651 aa25.45■■□□□ 1.66
TNFSF10-205ENST00000472804 MRC2Q9UBG0 1479 aa25.35■■□□□ 1.65
TNFSF10-205ENST00000472804 WDR62O43379 1518 aa25.27■■□□□ 1.64
TNFSF10-205ENST00000472804 CEP164Q9UPV0 1460 aa25.25■■□□□ 1.63
TNFSF10-205ENST00000472804 RSF1Q96T23 1441 aaPredicted RBP25.23■■□□□ 1.63
TNFSF10-205ENST00000472804 FANCD2Q9BXW9 1451 aa25.2■■□□□ 1.62
TNFSF10-205ENST00000472804 CFTRP13569 1480 aa25.18■■□□□ 1.62
TNFSF10-205ENST00000472804 TOP2AP11388 1531 aaKnown RBP25.17■■□□□ 1.62
TNFSF10-205ENST00000472804 URB2Q14146 1524 aaKnown RBP24.96■■□□□ 1.59
TNFSF10-205ENST00000472804 TRIM41Q8WV44 630 aa24.93■■□□□ 1.58
TNFSF10-205ENST00000472804 PRDM2Q13029 1718 aa24.9■■□□□ 1.58
TNFSF10-205ENST00000472804 OSCARQ8IYS5 282 aa24.88■■□□□ 1.57
TNFSF10-205ENST00000472804 CCDC88BA6NC98 1476 aa24.87■■□□□ 1.57
TNFSF10-205ENST00000472804 IFT140Q96RY7 1462 aa24.76■■□□□ 1.55
TNFSF10-205ENST00000472804 ABCC8Q09428 1581 aa24.72■■□□□ 1.55
TNFSF10-205ENST00000472804 TOPBP1Q92547 1522 aa24.7■■□□□ 1.54
TNFSF10-205ENST00000472804 ZNF608Q9ULD9 1512 aaPredicted RBP24.65■■□□□ 1.54
TNFSF10-205ENST00000472804 DNMBPQ6XZF7 1577 aa24.62■■□□□ 1.53
TNFSF10-205ENST00000472804 EIF4G3O43432 1585 aaKnown RBP24.54■■□□□ 1.52
TNFSF10-205ENST00000472804 RIMBP3CA6NJZ7 1639 aa24.49■■□□□ 1.51
TNFSF10-205ENST00000472804 RIMBP3BA6NNM3 1639 aa24.49■■□□□ 1.51
TNFSF10-205ENST00000472804 RIMBP3Q9UFD9 1639 aa24.49■■□□□ 1.51
TNFSF10-205ENST00000472804 TARBP1Q13395 1621 aaKnown RBP24.46■■□□□ 1.51
TNFSF10-205ENST00000472804 AQRO60306 1485 aaKnown RBP eCLIP24.44■■□□□ 1.5
TNFSF10-205ENST00000472804 POLA1P09884 1462 aaPredicted RBP24.44■■□□□ 1.5
TNFSF10-205ENST00000472804 ARHGEF11O15085 1522 aa24.42■■□□□ 1.5
TNFSF10-205ENST00000472804 SOGA1O94964 1423 aa24.35■■□□□ 1.49
TNFSF10-205ENST00000472804 FBLN2P98095 1184 aa24.35■■□□□ 1.49
TNFSF10-205ENST00000472804 CHD1O14646 1710 aa24.35■■□□□ 1.49
TNFSF10-205ENST00000472804 RAD54L2Q9Y4B4 1467 aa24.32■■□□□ 1.48
TNFSF10-205ENST00000472804 TDRD9Q8NDG6 1382 aaKnown RBP24.29■■□□□ 1.48
TNFSF10-205ENST00000472804 WDR97A6NE52 1622 aa24.29■■□□□ 1.48
TNFSF10-205ENST00000472804 FGD5Q6ZNL6 1462 aa24.28■■□□□ 1.48
TNFSF10-205ENST00000472804 CYB5RLQ6IPT4 315 aa24.27■■□□□ 1.48
TNFSF10-205ENST00000472804 CUX1P39880 1505 aa24.22■■□□□ 1.47
TNFSF10-205ENST00000472804 SNAPC4Q5SXM2 1469 aa24.2■■□□□ 1.47
TNFSF10-205ENST00000472804 CHMP7Q8WUX9 453 aaPredicted RBP24.18■■□□□ 1.46
TNFSF10-205ENST00000472804 MAGI1Q96QZ7 1491 aaPredicted RBP24.18■■□□□ 1.46
TNFSF10-205ENST00000472804 GRIN2BQ13224 1484 aa24.17■■□□□ 1.46
TNFSF10-205ENST00000472804 ARAP1Q96P48 1450 aa24.16■■□□□ 1.46
TNFSF10-205ENST00000472804 SYNJ1O43426 1573 aa24.12■■□□□ 1.45
TNFSF10-205ENST00000472804 CLASP1Q7Z460 1538 aa24.09■■□□□ 1.45
TNFSF10-205ENST00000472804 SYNJ2O15056 1496 aa24.08■■□□□ 1.45
TNFSF10-205ENST00000472804 SUPT5HO00267 1087 aaKnown RBP24.08■■□□□ 1.45
TNFSF10-205ENST00000472804 TRHP20396 242 aaPredicted RBP24.06■■□□□ 1.44
TNFSF10-205ENST00000472804 GAPVD1Q14C86 1478 aa24.06■■□□□ 1.44
TNFSF10-205ENST00000472804 ABCA10Q8WWZ4 1543 aa24.02■■□□□ 1.44
TNFSF10-205ENST00000472804 PBRM1Q86U86 1689 aa24.01■■□□□ 1.43
TNFSF10-205ENST00000472804 ABCA5Q8WWZ7 1642 aa23.96■■□□□ 1.43
TNFSF10-205ENST00000472804 WRNQ14191 1432 aaPredicted RBP eCLIP23.93■■□□□ 1.42
TNFSF10-205ENST00000472804 TOP2BQ02880 1626 aa23.84■■□□□ 1.41
TNFSF10-205ENST00000472804 GRIN2AQ12879 1464 aa23.83■■□□□ 1.41
TNFSF10-205ENST00000472804 BIVM-ERCC5R4GMW8 1640 aa23.83■■□□□ 1.41
TNFSF10-205ENST00000472804 ADAMTS12P58397 1594 aa23.79■■□□□ 1.4
TNFSF10-205ENST00000472804 FHAD1B1AJZ9 1412 aa23.76■■□□□ 1.39
TNFSF10-205ENST00000472804 NUP160Q12769 1436 aa23.75■■□□□ 1.39
TNFSF10-205ENST00000472804 ERICH3Q5RHP9 1530 aa23.73■■□□□ 1.39
TNFSF10-205ENST00000472804 CEP170Q5SW79 1584 aa23.71■■□□□ 1.39
TNFSF10-205ENST00000472804 ERCC6L2Q5T890 1561 aa23.65■■□□□ 1.38
TNFSF10-205ENST00000472804 SHROOM2Q13796 1616 aa23.64■■□□□ 1.38
TNFSF10-205ENST00000472804 PRG4Q92954 1404 aaPredicted RBP23.54■■□□□ 1.36
TNFSF10-205ENST00000472804 JPH4Q96JJ6 628 aa23.53■■□□□ 1.36
TNFSF10-205ENST00000472804 RUSC2Q8N2Y8 1516 aa23.46■■□□□ 1.35
TNFSF10-205ENST00000472804 AEBP2Q6ZN18 517 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms