RNA–Protein interactions for RNA: ENST00000472703.1

CDC42EP5-202, Transcript of CDC42 effector protein 5, humanhuman

TSL 2

Gene CDC42EP5, Length 288 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP5-202ENST00000472703 NISCHQ9Y2I1 1504 aa51.59■■■■■ 5.85
CDC42EP5-202ENST00000472703 CCDC180Q9P1Z9 1646 aa46.04■■■■■ 4.96
CDC42EP5-202ENST00000472703 ABCC9O60706 1549 aa45.21■■■■■ 4.83
CDC42EP5-202ENST00000472703 RB1CC1Q8TDY2 1594 aa43.45■■■■■ 4.55
CDC42EP5-202ENST00000472703 NACADO15069 1562 aa43.31■■■■■ 4.52
CDC42EP5-202ENST00000472703 DCAF8L2P0C7V8 631 aa43.27■■■■■ 4.52
CDC42EP5-202ENST00000472703 ZCCHC6Q5VYS8 1495 aaKnown RBP42.93■■■■■ 4.46
CDC42EP5-202ENST00000472703 MYO15BQ96JP2 1530 aa42.92■■■■■ 4.46
CDC42EP5-202ENST00000472703 DCAF1Q9Y4B6 1507 aa42.67■■■■■ 4.42
CDC42EP5-202ENST00000472703 UNC13AQ9UPW8 1703 aa42.45■■■■■ 4.39
CDC42EP5-202ENST00000472703 PABPN1Q86U42 306 aaKnown RBP eCLIP42.18■■■■■ 4.34
CDC42EP5-202ENST00000472703 BICRAQ9NZM4 1560 aa42.03■■■■■ 4.32
CDC42EP5-202ENST00000472703 SCRIBQ14160 1630 aa41.99■■■■■ 4.31
CDC42EP5-202ENST00000472703 SHROOM4Q9ULL8 1493 aa41.66■■■■■ 4.26
CDC42EP5-202ENST00000472703 DNAJC5BQ9UF47 199 aa41.54■■■■■ 4.24
CDC42EP5-202ENST00000472703 EIF4G1Q04637 1599 aaKnown RBP41■■■■■ 4.15
CDC42EP5-202ENST00000472703 CC2D2AQ9P2K1 1620 aa40.89■■■■■ 4.14
CDC42EP5-202ENST00000472703 CECR2Q9BXF3 1484 aa40.65■■■■■ 4.1
CDC42EP5-202ENST00000472703 SMARCA4P51532 1647 aa40.12■■■■■ 4.01
CDC42EP5-202ENST00000472703 BAZ1AQ9NRL2 1556 aaPredicted RBP40.06■■■■■ 4
CDC42EP5-202ENST00000472703 SMARCA2P51531 1590 aa39.92■■■■□ 3.98
CDC42EP5-202ENST00000472703 NCAPD3P42695 1498 aa39.9■■■■□ 3.98
CDC42EP5-202ENST00000472703 ATAD2BQ9ULI0 1458 aa39.9■■■■□ 3.98
CDC42EP5-202ENST00000472703 HMGXB3Q12766 1538 aa39.75■■■■□ 3.95
CDC42EP5-202ENST00000472703 MROH2BQ7Z745 1585 aa39.74■■■■□ 3.95
CDC42EP5-202ENST00000472703 PEG3Q9GZU2 1588 aa39.68■■■■□ 3.94
CDC42EP5-202ENST00000472703 BAZ1BQ9UIG0 1483 aaKnown RBP39.64■■■■□ 3.94
CDC42EP5-202ENST00000472703 WIZO95785 1651 aa39.35■■■■□ 3.89
CDC42EP5-202ENST00000472703 RSF1Q96T23 1441 aaPredicted RBP39.19■■■■□ 3.86
CDC42EP5-202ENST00000472703 ERCC6Q03468 1493 aa39.07■■■■□ 3.85
CDC42EP5-202ENST00000472703 NESP48681 1621 aa39.03■■■■□ 3.84
CDC42EP5-202ENST00000472703 LAMC3Q9Y6N6 1575 aa38.97■■■■□ 3.83
CDC42EP5-202ENST00000472703 TOP2AP11388 1531 aaKnown RBP38.93■■■■□ 3.82
CDC42EP5-202ENST00000472703 CADPSQ9ULU8 1353 aa38.75■■■■□ 3.79
CDC42EP5-202ENST00000472703 PDS5BQ9NTI5 1447 aa38.71■■■■□ 3.79
CDC42EP5-202ENST00000472703 CUX2O14529 1486 aa38.67■■■■□ 3.78
CDC42EP5-202ENST00000472703 KIF21AQ7Z4S6 1674 aa38.64■■■■□ 3.78
CDC42EP5-202ENST00000472703 THOC2Q8NI27 1593 aaKnown RBP38.53■■■■□ 3.76
CDC42EP5-202ENST00000472703 CFTRP13569 1480 aa38.47■■■■□ 3.75
CDC42EP5-202ENST00000472703 CCDC88BA6NC98 1476 aa38.41■■■■□ 3.74
CDC42EP5-202ENST00000472703 CEP164Q9UPV0 1460 aa38.35■■■■□ 3.73
CDC42EP5-202ENST00000472703 FANCD2Q9BXW9 1451 aa38.35■■■■□ 3.73
CDC42EP5-202ENST00000472703 MRC2Q9UBG0 1479 aa38.32■■■■□ 3.72
CDC42EP5-202ENST00000472703 PRDM2Q13029 1718 aa38.29■■■■□ 3.72
CDC42EP5-202ENST00000472703 WDR62O43379 1518 aa38.18■■■■□ 3.7
CDC42EP5-202ENST00000472703 SUPT5HO00267 1087 aaKnown RBP38.12■■■■□ 3.69
CDC42EP5-202ENST00000472703 URB2Q14146 1524 aaKnown RBP37.93■■■■□ 3.66
CDC42EP5-202ENST00000472703 ABCC8Q09428 1581 aa37.72■■■■□ 3.63
CDC42EP5-202ENST00000472703 TOPBP1Q92547 1522 aa37.69■■■■□ 3.62
CDC42EP5-202ENST00000472703 DNAJC5Q9H3Z4 198 aa37.66■■■■□ 3.62
CDC42EP5-202ENST00000472703 DNMBPQ6XZF7 1577 aa37.66■■■■□ 3.62
CDC42EP5-202ENST00000472703 IFT140Q96RY7 1462 aa37.53■■■■□ 3.6
CDC42EP5-202ENST00000472703 POLA1P09884 1462 aaPredicted RBP37.35■■■■□ 3.57
CDC42EP5-202ENST00000472703 ZNF608Q9ULD9 1512 aaPredicted RBP37.32■■■■□ 3.57
CDC42EP5-202ENST00000472703 CUX1P39880 1505 aa37.31■■■■□ 3.56
CDC42EP5-202ENST00000472703 TARBP1Q13395 1621 aaKnown RBP37.28■■■■□ 3.56
CDC42EP5-202ENST00000472703 FGD5Q6ZNL6 1462 aa37.25■■■■□ 3.55
CDC42EP5-202ENST00000472703 EIF4G3O43432 1585 aaKnown RBP37.25■■■■□ 3.55
CDC42EP5-202ENST00000472703 SOGA1O94964 1423 aa37.2■■■■□ 3.55
CDC42EP5-202ENST00000472703 RAD54L2Q9Y4B4 1467 aa37.18■■■■□ 3.54
CDC42EP5-202ENST00000472703 AQRO60306 1485 aaKnown RBP eCLIP37.1■■■■□ 3.53
CDC42EP5-202ENST00000472703 WDR97A6NE52 1622 aa37.05■■■■□ 3.52
CDC42EP5-202ENST00000472703 WRNQ14191 1432 aaPredicted RBP eCLIP37.02■■■■□ 3.52
CDC42EP5-202ENST00000472703 OSCARQ8IYS5 282 aa37.01■■■■□ 3.52
CDC42EP5-202ENST00000472703 TDRD9Q8NDG6 1382 aaKnown RBP37■■■■□ 3.51
CDC42EP5-202ENST00000472703 BIVM-ERCC5R4GMW8 1640 aa36.98■■■■□ 3.51
CDC42EP5-202ENST00000472703 TOP2BQ02880 1626 aa36.97■■■■□ 3.51
CDC42EP5-202ENST00000472703 SYNJ1O43426 1573 aa36.93■■■■□ 3.5
CDC42EP5-202ENST00000472703 ABCA10Q8WWZ4 1543 aa36.85■■■■□ 3.49
CDC42EP5-202ENST00000472703 CHD1O14646 1710 aa36.85■■■■□ 3.49
CDC42EP5-202ENST00000472703 GRIN2BQ13224 1484 aa36.82■■■■□ 3.48
CDC42EP5-202ENST00000472703 SNAPC4Q5SXM2 1469 aa36.8■■■■□ 3.48
CDC42EP5-202ENST00000472703 GAPVD1Q14C86 1478 aa36.79■■■■□ 3.48
CDC42EP5-202ENST00000472703 PBRM1Q86U86 1689 aa36.79■■■■□ 3.48
CDC42EP5-202ENST00000472703 FBLN2P98095 1184 aa36.78■■■■□ 3.48
CDC42EP5-202ENST00000472703 ABCA5Q8WWZ7 1642 aa36.75■■■■□ 3.47
CDC42EP5-202ENST00000472703 MAGI1Q96QZ7 1491 aaPredicted RBP36.75■■■■□ 3.47
CDC42EP5-202ENST00000472703 CHMP7Q8WUX9 453 aaPredicted RBP36.62■■■■□ 3.45
CDC42EP5-202ENST00000472703 SYNJ2O15056 1496 aa36.6■■■■□ 3.45
CDC42EP5-202ENST00000472703 RIMBP3CA6NJZ7 1639 aa36.47■■■■□ 3.43
CDC42EP5-202ENST00000472703 RIMBP3BA6NNM3 1639 aa36.47■■■■□ 3.43
CDC42EP5-202ENST00000472703 RIMBP3Q9UFD9 1639 aa36.47■■■■□ 3.43
CDC42EP5-202ENST00000472703 ADAMTS12P58397 1594 aa36.44■■■■□ 3.42
CDC42EP5-202ENST00000472703 ERICH3Q5RHP9 1530 aa36.44■■■■□ 3.42
CDC42EP5-202ENST00000472703 TRIM41Q8WV44 630 aa36.44■■■■□ 3.42
CDC42EP5-202ENST00000472703 ARHGEF11O15085 1522 aa36.43■■■■□ 3.42
CDC42EP5-202ENST00000472703 CLASP1Q7Z460 1538 aa36.37■■■■□ 3.41
CDC42EP5-202ENST00000472703 FHAD1B1AJZ9 1412 aa36.34■■■■□ 3.41
CDC42EP5-202ENST00000472703 GRIN2AQ12879 1464 aa36.34■■■■□ 3.41
CDC42EP5-202ENST00000472703 KIF27Q86VH2 1401 aa36.29■■■■□ 3.4
CDC42EP5-202ENST00000472703 CEP170Q5SW79 1584 aa36.15■■■■□ 3.38
CDC42EP5-202ENST00000472703 NUP160Q12769 1436 aa36.15■■■■□ 3.38
CDC42EP5-202ENST00000472703 CUL7Q14999 1698 aa36.13■■■■□ 3.37
CDC42EP5-202ENST00000472703 ARAP1Q96P48 1450 aa36.1■■■■□ 3.37
CDC42EP5-202ENST00000472703 CYB5RLQ6IPT4 315 aa36.09■■■■□ 3.37
CDC42EP5-202ENST00000472703 IGF1RP08069 1367 aa36.07■■■■□ 3.36
CDC42EP5-202ENST00000472703 SHROOM2Q13796 1616 aa35.92■■■■□ 3.34
CDC42EP5-202ENST00000472703 CARMIL1Q5VZK9 1371 aa35.91■■■■□ 3.34
CDC42EP5-202ENST00000472703 RUSC2Q8N2Y8 1516 aa35.9■■■■□ 3.34
CDC42EP5-202ENST00000472703 ERCC6L2Q5T890 1561 aa35.82■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms