RNA–Protein interactions for RNA: ENST00000472663.1

MSRB2-203, Transcript of methionine sulfoxide reductase B2, humanhuman

TSL 5

Gene MSRB2, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB2-203ENST00000472663 NISCHQ9Y2I1 1504 aa18.55■□□□□ 0.56
MSRB2-203ENST00000472663 ABCC9O60706 1549 aa17.16■□□□□ 0.34
MSRB2-203ENST00000472663 CCDC180Q9P1Z9 1646 aa16.74■□□□□ 0.27
MSRB2-203ENST00000472663 DNAJC5BQ9UF47 199 aa16.41■□□□□ 0.22
MSRB2-203ENST00000472663 RB1CC1Q8TDY2 1594 aa16.04■□□□□ 0.16
MSRB2-203ENST00000472663 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
MSRB2-203ENST00000472663 UNC13AQ9UPW8 1703 aa15.93■□□□□ 0.14
MSRB2-203ENST00000472663 NACADO15069 1562 aa15.83■□□□□ 0.12
MSRB2-203ENST00000472663 DCAF8L2P0C7V8 631 aa15.8■□□□□ 0.12
MSRB2-203ENST00000472663 BICRAQ9NZM4 1560 aa15.75■□□□□ 0.11
MSRB2-203ENST00000472663 CC2D2AQ9P2K1 1620 aa15.46■□□□□ 0.06
MSRB2-203ENST00000472663 MYO15BQ96JP2 1530 aa15.43■□□□□ 0.06
MSRB2-203ENST00000472663 SCRIBQ14160 1630 aa15.4■□□□□ 0.06
MSRB2-203ENST00000472663 CECR2Q9BXF3 1484 aa15.4■□□□□ 0.06
MSRB2-203ENST00000472663 ZCCHC6Q5VYS8 1495 aaKnown RBP15.33■□□□□ 0.04
MSRB2-203ENST00000472663 EIF4G1Q04637 1599 aaKnown RBP15.32■□□□□ 0.04
MSRB2-203ENST00000472663 SHROOM4Q9ULL8 1493 aa15.2■□□□□ 0.02
MSRB2-203ENST00000472663 DCAF1Q9Y4B6 1507 aa15.17■□□□□ 0.02
MSRB2-203ENST00000472663 DNAJC5Q9H3Z4 198 aa15.06■□□□□ 0
MSRB2-203ENST00000472663 ERCC6Q03468 1493 aa14.71□□□□□ -0.05
MSRB2-203ENST00000472663 NESP48681 1621 aa14.71□□□□□ -0.05
MSRB2-203ENST00000472663 CUX2O14529 1486 aa14.7□□□□□ -0.06
MSRB2-203ENST00000472663 NCAPD3P42695 1498 aa14.63□□□□□ -0.07
MSRB2-203ENST00000472663 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
MSRB2-203ENST00000472663 SMARCA4P51532 1647 aa14.58□□□□□ -0.08
MSRB2-203ENST00000472663 THOC2Q8NI27 1593 aaKnown RBP14.56□□□□□ -0.08
MSRB2-203ENST00000472663 KIF21AQ7Z4S6 1674 aa14.52□□□□□ -0.09
MSRB2-203ENST00000472663 SMARCA2P51531 1590 aa14.51□□□□□ -0.09
MSRB2-203ENST00000472663 HMGXB3Q12766 1538 aa14.51□□□□□ -0.09
MSRB2-203ENST00000472663 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
MSRB2-203ENST00000472663 TRIM41Q8WV44 630 aa14.41□□□□□ -0.1
MSRB2-203ENST00000472663 MROH2BQ7Z745 1585 aa14.39□□□□□ -0.11
MSRB2-203ENST00000472663 BAZ1AQ9NRL2 1556 aaPredicted RBP14.36□□□□□ -0.11
MSRB2-203ENST00000472663 PEG3Q9GZU2 1588 aa14.34□□□□□ -0.11
MSRB2-203ENST00000472663 LAMC3Q9Y6N6 1575 aa14.34□□□□□ -0.11
MSRB2-203ENST00000472663 WIZO95785 1651 aa14.25□□□□□ -0.13
MSRB2-203ENST00000472663 MRC2Q9UBG0 1479 aa14.22□□□□□ -0.13
MSRB2-203ENST00000472663 WDR62O43379 1518 aa14.21□□□□□ -0.13
MSRB2-203ENST00000472663 PDS5BQ9NTI5 1447 aa14.21□□□□□ -0.13
MSRB2-203ENST00000472663 CADPSQ9ULU8 1353 aa14.17□□□□□ -0.14
MSRB2-203ENST00000472663 CEP164Q9UPV0 1460 aa14.09□□□□□ -0.15
MSRB2-203ENST00000472663 FANCD2Q9BXW9 1451 aa14.08□□□□□ -0.16
MSRB2-203ENST00000472663 URB2Q14146 1524 aaKnown RBP14.06□□□□□ -0.16
MSRB2-203ENST00000472663 RIMBP3CA6NJZ7 1639 aa14.02□□□□□ -0.16
MSRB2-203ENST00000472663 RIMBP3BA6NNM3 1639 aa14.02□□□□□ -0.16
MSRB2-203ENST00000472663 RIMBP3Q9UFD9 1639 aa14.02□□□□□ -0.16
MSRB2-203ENST00000472663 CFTRP13569 1480 aa13.98□□□□□ -0.17
MSRB2-203ENST00000472663 ZNF608Q9ULD9 1512 aaPredicted RBP13.97□□□□□ -0.17
MSRB2-203ENST00000472663 OSCARQ8IYS5 282 aa13.96□□□□□ -0.17
MSRB2-203ENST00000472663 TOP2AP11388 1531 aaKnown RBP13.92□□□□□ -0.18
MSRB2-203ENST00000472663 RSF1Q96T23 1441 aaPredicted RBP13.91□□□□□ -0.18
MSRB2-203ENST00000472663 PRDM2Q13029 1718 aa13.91□□□□□ -0.18
MSRB2-203ENST00000472663 ARHGEF11O15085 1522 aa13.9□□□□□ -0.19
MSRB2-203ENST00000472663 CHD1O14646 1710 aa13.86□□□□□ -0.19
MSRB2-203ENST00000472663 EIF4G3O43432 1585 aaKnown RBP13.85□□□□□ -0.19
MSRB2-203ENST00000472663 TOPBP1Q92547 1522 aa13.81□□□□□ -0.2
MSRB2-203ENST00000472663 CCDC88BA6NC98 1476 aa13.8□□□□□ -0.2
MSRB2-203ENST00000472663 IFT140Q96RY7 1462 aa13.79□□□□□ -0.2
MSRB2-203ENST00000472663 ARAP1Q96P48 1450 aa13.78□□□□□ -0.2
MSRB2-203ENST00000472663 CYB5RLQ6IPT4 315 aa13.77□□□□□ -0.21
MSRB2-203ENST00000472663 AQRO60306 1485 aaKnown RBP eCLIP13.75□□□□□ -0.21
MSRB2-203ENST00000472663 TARBP1Q13395 1621 aaKnown RBP13.75□□□□□ -0.21
MSRB2-203ENST00000472663 DNMBPQ6XZF7 1577 aa13.71□□□□□ -0.22
MSRB2-203ENST00000472663 RAD54L2Q9Y4B4 1467 aa13.68□□□□□ -0.22
MSRB2-203ENST00000472663 TRHP20396 242 aaPredicted RBP13.68□□□□□ -0.22
MSRB2-203ENST00000472663 FBLN2P98095 1184 aa13.66□□□□□ -0.22
MSRB2-203ENST00000472663 POLA1P09884 1462 aaPredicted RBP13.66□□□□□ -0.22
MSRB2-203ENST00000472663 TDRD9Q8NDG6 1382 aaKnown RBP13.61□□□□□ -0.23
MSRB2-203ENST00000472663 CLASP1Q7Z460 1538 aa13.6□□□□□ -0.23
MSRB2-203ENST00000472663 SNAPC4Q5SXM2 1469 aa13.6□□□□□ -0.23
MSRB2-203ENST00000472663 ABCC8Q09428 1581 aa13.55□□□□□ -0.24
MSRB2-203ENST00000472663 FGD5Q6ZNL6 1462 aa13.55□□□□□ -0.24
MSRB2-203ENST00000472663 CUX1P39880 1505 aa13.53□□□□□ -0.24
MSRB2-203ENST00000472663 SOGA1O94964 1423 aa13.52□□□□□ -0.25
MSRB2-203ENST00000472663 ERCC6L2Q5T890 1561 aa13.52□□□□□ -0.25
MSRB2-203ENST00000472663 WDR97A6NE52 1622 aa13.52□□□□□ -0.25
MSRB2-203ENST00000472663 PBRM1Q86U86 1689 aa13.5□□□□□ -0.25
MSRB2-203ENST00000472663 SYNJ1O43426 1573 aa13.47□□□□□ -0.25
MSRB2-203ENST00000472663 CHMP7Q8WUX9 453 aaPredicted RBP13.43□□□□□ -0.26
MSRB2-203ENST00000472663 GAPVD1Q14C86 1478 aa13.42□□□□□ -0.26
MSRB2-203ENST00000472663 MAGI1Q96QZ7 1491 aaPredicted RBP13.42□□□□□ -0.26
MSRB2-203ENST00000472663 SYNJ2O15056 1496 aa13.42□□□□□ -0.26
MSRB2-203ENST00000472663 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
MSRB2-203ENST00000472663 AEBP2Q6ZN18 517 aaPredicted RBP13.41□□□□□ -0.26
MSRB2-203ENST00000472663 ABCA5Q8WWZ7 1642 aa13.39□□□□□ -0.27
MSRB2-203ENST00000472663 CEP170Q5SW79 1584 aa13.37□□□□□ -0.27
MSRB2-203ENST00000472663 KIF13AQ9H1H9 1805 aa13.34□□□□□ -0.27
MSRB2-203ENST00000472663 ADAMTS12P58397 1594 aa13.32□□□□□ -0.28
MSRB2-203ENST00000472663 GRIN2AQ12879 1464 aa13.29□□□□□ -0.28
MSRB2-203ENST00000472663 ABCA10Q8WWZ4 1543 aa13.29□□□□□ -0.28
MSRB2-203ENST00000472663 SHROOM2Q13796 1616 aa13.28□□□□□ -0.28
MSRB2-203ENST00000472663 NUP160Q12769 1436 aa13.24□□□□□ -0.29
MSRB2-203ENST00000472663 BIVM-ERCC5R4GMW8 1640 aa13.19□□□□□ -0.3
MSRB2-203ENST00000472663 PRG4Q92954 1404 aaPredicted RBP13.16□□□□□ -0.3
MSRB2-203ENST00000472663 TSPOAP1O95153 1857 aa13.16□□□□□ -0.3
MSRB2-203ENST00000472663 TOP2BQ02880 1626 aa13.16□□□□□ -0.3
MSRB2-203ENST00000472663 RUSC2Q8N2Y8 1516 aa13.14□□□□□ -0.31
MSRB2-203ENST00000472663 ADCY10Q96PN6 1610 aa13.14□□□□□ -0.31
MSRB2-203ENST00000472663 FHAD1B1AJZ9 1412 aa13.13□□□□□ -0.31
MSRB2-203ENST00000472663 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms