RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 NISCHQ9Y2I1 1504 aa48.72■■■■■ 5.39
UBQLN4-203ENST00000472638 CCDC180Q9P1Z9 1646 aa43.38■■■■■ 4.54
UBQLN4-203ENST00000472638 ABCC9O60706 1549 aa43■■■■■ 4.47
UBQLN4-203ENST00000472638 RB1CC1Q8TDY2 1594 aa41.08■■■■■ 4.17
UBQLN4-203ENST00000472638 DCAF8L2P0C7V8 631 aa41.06■■■■■ 4.16
UBQLN4-203ENST00000472638 NACADO15069 1562 aa40.92■■■■■ 4.14
UBQLN4-203ENST00000472638 MYO15BQ96JP2 1530 aa40.49■■■■■ 4.07
UBQLN4-203ENST00000472638 ZCCHC6Q5VYS8 1495 aaKnown RBP40.49■■■■■ 4.07
UBQLN4-203ENST00000472638 DCAF1Q9Y4B6 1507 aa40.2■■■■■ 4.03
UBQLN4-203ENST00000472638 PABPN1Q86U42 306 aaKnown RBP eCLIP40.18■■■■■ 4.02
UBQLN4-203ENST00000472638 UNC13AQ9UPW8 1703 aa40.11■■■■■ 4.01
UBQLN4-203ENST00000472638 BICRAQ9NZM4 1560 aa39.87■■■■□ 3.97
UBQLN4-203ENST00000472638 DNAJC5BQ9UF47 199 aa39.84■■■■□ 3.97
UBQLN4-203ENST00000472638 SCRIBQ14160 1630 aa39.7■■■■□ 3.95
UBQLN4-203ENST00000472638 SHROOM4Q9ULL8 1493 aa39.3■■■■□ 3.88
UBQLN4-203ENST00000472638 EIF4G1Q04637 1599 aaKnown RBP38.85■■■■□ 3.81
UBQLN4-203ENST00000472638 CC2D2AQ9P2K1 1620 aa38.8■■■■□ 3.8
UBQLN4-203ENST00000472638 CECR2Q9BXF3 1484 aa38.64■■■■□ 3.78
UBQLN4-203ENST00000472638 SMARCA4P51532 1647 aa37.87■■■■□ 3.65
UBQLN4-203ENST00000472638 NCAPD3P42695 1498 aa37.79■■■■□ 3.64
UBQLN4-203ENST00000472638 ATAD2BQ9ULI0 1458 aa37.79■■■■□ 3.64
UBQLN4-203ENST00000472638 BAZ1AQ9NRL2 1556 aaPredicted RBP37.76■■■■□ 3.64
UBQLN4-203ENST00000472638 SMARCA2P51531 1590 aa37.68■■■■□ 3.62
UBQLN4-203ENST00000472638 MROH2BQ7Z745 1585 aa37.59■■■■□ 3.61
UBQLN4-203ENST00000472638 HMGXB3Q12766 1538 aa37.54■■■■□ 3.6
UBQLN4-203ENST00000472638 BAZ1BQ9UIG0 1483 aaKnown RBP37.46■■■■□ 3.59
UBQLN4-203ENST00000472638 PEG3Q9GZU2 1588 aa37.44■■■■□ 3.58
UBQLN4-203ENST00000472638 WIZO95785 1651 aa37.15■■■■□ 3.54
UBQLN4-203ENST00000472638 NESP48681 1621 aa37.1■■■■□ 3.53
UBQLN4-203ENST00000472638 ERCC6Q03468 1493 aa37.07■■■■□ 3.52
UBQLN4-203ENST00000472638 RSF1Q96T23 1441 aaPredicted RBP37.02■■■■□ 3.52
UBQLN4-203ENST00000472638 LAMC3Q9Y6N6 1575 aa36.83■■■■□ 3.49
UBQLN4-203ENST00000472638 CUX2O14529 1486 aa36.72■■■■□ 3.47
UBQLN4-203ENST00000472638 CADPSQ9ULU8 1353 aa36.71■■■■□ 3.47
UBQLN4-203ENST00000472638 TOP2AP11388 1531 aaKnown RBP36.69■■■■□ 3.46
UBQLN4-203ENST00000472638 PDS5BQ9NTI5 1447 aa36.64■■■■□ 3.46
UBQLN4-203ENST00000472638 KIF21AQ7Z4S6 1674 aa36.56■■■■□ 3.44
UBQLN4-203ENST00000472638 THOC2Q8NI27 1593 aaKnown RBP36.52■■■■□ 3.44
UBQLN4-203ENST00000472638 CFTRP13569 1480 aa36.38■■■■□ 3.41
UBQLN4-203ENST00000472638 CCDC88BA6NC98 1476 aa36.32■■■■□ 3.41
UBQLN4-203ENST00000472638 FANCD2Q9BXW9 1451 aa36.31■■■■□ 3.4
UBQLN4-203ENST00000472638 MRC2Q9UBG0 1479 aa36.3■■■■□ 3.4
UBQLN4-203ENST00000472638 CEP164Q9UPV0 1460 aa36.28■■■■□ 3.4
UBQLN4-203ENST00000472638 WDR62O43379 1518 aa36.15■■■■□ 3.38
UBQLN4-203ENST00000472638 DNAJC5Q9H3Z4 198 aa36.1■■■■□ 3.37
UBQLN4-203ENST00000472638 PRDM2Q13029 1718 aa35.97■■■■□ 3.35
UBQLN4-203ENST00000472638 URB2Q14146 1524 aaKnown RBP35.97■■■■□ 3.35
UBQLN4-203ENST00000472638 SUPT5HO00267 1087 aaKnown RBP35.94■■■■□ 3.34
UBQLN4-203ENST00000472638 TOPBP1Q92547 1522 aa35.67■■■■□ 3.3
UBQLN4-203ENST00000472638 ABCC8Q09428 1581 aa35.58■■■■□ 3.29
UBQLN4-203ENST00000472638 DNMBPQ6XZF7 1577 aa35.56■■■■□ 3.28
UBQLN4-203ENST00000472638 IFT140Q96RY7 1462 aa35.52■■■■□ 3.28
UBQLN4-203ENST00000472638 ZNF608Q9ULD9 1512 aaPredicted RBP35.46■■■■□ 3.27
UBQLN4-203ENST00000472638 POLA1P09884 1462 aaPredicted RBP35.35■■■■□ 3.25
UBQLN4-203ENST00000472638 TARBP1Q13395 1621 aaKnown RBP35.28■■■■□ 3.24
UBQLN4-203ENST00000472638 CUX1P39880 1505 aa35.27■■■■□ 3.24
UBQLN4-203ENST00000472638 RAD54L2Q9Y4B4 1467 aa35.26■■■■□ 3.23
UBQLN4-203ENST00000472638 EIF4G3O43432 1585 aaKnown RBP35.24■■■■□ 3.23
UBQLN4-203ENST00000472638 SOGA1O94964 1423 aa35.23■■■■□ 3.23
UBQLN4-203ENST00000472638 FGD5Q6ZNL6 1462 aa35.22■■■■□ 3.23
UBQLN4-203ENST00000472638 OSCARQ8IYS5 282 aa35.22■■■■□ 3.23
UBQLN4-203ENST00000472638 AQRO60306 1485 aaKnown RBP eCLIP35.22■■■■□ 3.237e-8■■■■□ 21.1
UBQLN4-203ENST00000472638 TDRD9Q8NDG6 1382 aaKnown RBP35.12■■■■□ 3.21
UBQLN4-203ENST00000472638 FBLN2P98095 1184 aa34.94■■■■□ 3.18
UBQLN4-203ENST00000472638 WRNQ14191 1432 aaPredicted RBP eCLIP34.91■■■■□ 3.18
UBQLN4-203ENST00000472638 WDR97A6NE52 1622 aa34.88■■■■□ 3.17
UBQLN4-203ENST00000472638 TRIM41Q8WV44 630 aa34.88■■■■□ 3.17
UBQLN4-203ENST00000472638 SNAPC4Q5SXM2 1469 aa34.86■■■■□ 3.17
UBQLN4-203ENST00000472638 CHD1O14646 1710 aa34.85■■■■□ 3.17
UBQLN4-203ENST00000472638 SYNJ1O43426 1573 aa34.85■■■■□ 3.17
UBQLN4-203ENST00000472638 TOP2BQ02880 1626 aa34.82■■■■□ 3.16
UBQLN4-203ENST00000472638 GRIN2BQ13224 1484 aa34.82■■■■□ 3.16
UBQLN4-203ENST00000472638 ABCA10Q8WWZ4 1543 aa34.81■■■■□ 3.16
UBQLN4-203ENST00000472638 BIVM-ERCC5R4GMW8 1640 aa34.81■■■■□ 3.16
UBQLN4-203ENST00000472638 GAPVD1Q14C86 1478 aa34.78■■■■□ 3.16
UBQLN4-203ENST00000472638 MAGI1Q96QZ7 1491 aaPredicted RBP34.73■■■■□ 3.15
UBQLN4-203ENST00000472638 CHMP7Q8WUX9 453 aaPredicted RBP34.72■■■■□ 3.15
UBQLN4-203ENST00000472638 ABCA5Q8WWZ7 1642 aa34.7■■■■□ 3.14
UBQLN4-203ENST00000472638 PBRM1Q86U86 1689 aa34.68■■■■□ 3.14
UBQLN4-203ENST00000472638 RIMBP3CA6NJZ7 1639 aa34.66■■■■□ 3.14
UBQLN4-203ENST00000472638 RIMBP3BA6NNM3 1639 aa34.66■■■■□ 3.14
UBQLN4-203ENST00000472638 RIMBP3Q9UFD9 1639 aa34.66■■■■□ 3.14
UBQLN4-203ENST00000472638 SYNJ2O15056 1496 aa34.63■■■■□ 3.13
UBQLN4-203ENST00000472638 ARHGEF11O15085 1522 aa34.62■■■■□ 3.13
UBQLN4-203ENST00000472638 CLASP1Q7Z460 1538 aa34.46■■■■□ 3.11
UBQLN4-203ENST00000472638 ADAMTS12P58397 1594 aa34.41■■■■□ 3.1
UBQLN4-203ENST00000472638 CYB5RLQ6IPT4 315 aa34.41■■■■□ 3.1
UBQLN4-203ENST00000472638 ERICH3Q5RHP9 1530 aa34.37■■■■□ 3.09
UBQLN4-203ENST00000472638 GRIN2AQ12879 1464 aa34.37■■■■□ 3.09
UBQLN4-203ENST00000472638 FHAD1B1AJZ9 1412 aa34.36■■■■□ 3.09
UBQLN4-203ENST00000472638 ARAP1Q96P48 1450 aa34.33■■■■□ 3.09
UBQLN4-203ENST00000472638 CEP170Q5SW79 1584 aa34.23■■■■□ 3.07
UBQLN4-203ENST00000472638 NUP160Q12769 1436 aa34.21■■■■□ 3.07
UBQLN4-203ENST00000472638 KIF27Q86VH2 1401 aa34.2■■■■□ 3.06
UBQLN4-203ENST00000472638 IGF1RP08069 1367 aa34.13■■■■□ 3.05
UBQLN4-203ENST00000472638 ERCC6L2Q5T890 1561 aa34.04■■■■□ 3.04
UBQLN4-203ENST00000472638 CUL7Q14999 1698 aa33.97■■■■□ 3.03
UBQLN4-203ENST00000472638 SHROOM2Q13796 1616 aa33.96■■■■□ 3.03
UBQLN4-203ENST00000472638 JPH4Q96JJ6 628 aa33.93■■■■□ 3.02
UBQLN4-203ENST00000472638 CARMIL1Q5VZK9 1371 aa33.93■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms