RNA–Protein interactions for RNA: ENST00000472621.1

ARF3-203, Transcript of ADP ribosylation factor 3, humanhuman

TSL 5

Gene ARF3, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-203ENST00000472621 NISCHQ9Y2I1 1504 aa34.91■■■■□ 3.18
ARF3-203ENST00000472621 CCDC180Q9P1Z9 1646 aa31.14■■■□□ 2.58
ARF3-203ENST00000472621 ABCC9O60706 1549 aa30.68■■■□□ 2.5
ARF3-203ENST00000472621 RB1CC1Q8TDY2 1594 aa29.42■■■□□ 2.3
ARF3-203ENST00000472621 NACADO15069 1562 aa29.35■■■□□ 2.29
ARF3-203ENST00000472621 DCAF8L2P0C7V8 631 aa29.16■■■□□ 2.26
ARF3-203ENST00000472621 MYO15BQ96JP2 1530 aa29.15■■■□□ 2.26
ARF3-203ENST00000472621 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
ARF3-203ENST00000472621 DCAF1Q9Y4B6 1507 aa28.92■■■□□ 2.22
ARF3-203ENST00000472621 UNC13AQ9UPW8 1703 aa28.73■■■□□ 2.19
ARF3-203ENST00000472621 PABPN1Q86U42 306 aaKnown RBP eCLIP28.62■■■□□ 2.17
ARF3-203ENST00000472621 BICRAQ9NZM4 1560 aa28.58■■■□□ 2.17
ARF3-203ENST00000472621 DNAJC5BQ9UF47 199 aa28.45■■■□□ 2.14
ARF3-203ENST00000472621 SCRIBQ14160 1630 aa28.34■■■□□ 2.13
ARF3-203ENST00000472621 SHROOM4Q9ULL8 1493 aa28.28■■■□□ 2.12
ARF3-203ENST00000472621 EIF4G1Q04637 1599 aaKnown RBP27.82■■■□□ 2.04
ARF3-203ENST00000472621 CC2D2AQ9P2K1 1620 aa27.75■■■□□ 2.03
ARF3-203ENST00000472621 CECR2Q9BXF3 1484 aa27.63■■■□□ 2.01
ARF3-203ENST00000472621 SMARCA4P51532 1647 aa27.12■■□□□ 1.93
ARF3-203ENST00000472621 NCAPD3P42695 1498 aa27.12■■□□□ 1.93
ARF3-203ENST00000472621 ATAD2BQ9ULI0 1458 aa27.07■■□□□ 1.92
ARF3-203ENST00000472621 BAZ1AQ9NRL2 1556 aaPredicted RBP27.06■■□□□ 1.92
ARF3-203ENST00000472621 SMARCA2P51531 1590 aa27.01■■□□□ 1.91
ARF3-203ENST00000472621 HMGXB3Q12766 1538 aa26.94■■□□□ 1.9
ARF3-203ENST00000472621 PEG3Q9GZU2 1588 aa26.92■■□□□ 1.9
ARF3-203ENST00000472621 MROH2BQ7Z745 1585 aa26.89■■□□□ 1.9
ARF3-203ENST00000472621 BAZ1BQ9UIG0 1483 aaKnown RBP26.8■■□□□ 1.88
ARF3-203ENST00000472621 WIZO95785 1651 aa26.55■■□□□ 1.84
ARF3-203ENST00000472621 RSF1Q96T23 1441 aaPredicted RBP26.51■■□□□ 1.83
ARF3-203ENST00000472621 NESP48681 1621 aa26.49■■□□□ 1.83
ARF3-203ENST00000472621 ERCC6Q03468 1493 aa26.44■■□□□ 1.82
ARF3-203ENST00000472621 LAMC3Q9Y6N6 1575 aa26.39■■□□□ 1.82
ARF3-203ENST00000472621 CUX2O14529 1486 aa26.32■■□□□ 1.8
ARF3-203ENST00000472621 TOP2AP11388 1531 aaKnown RBP26.29■■□□□ 1.8
ARF3-203ENST00000472621 CADPSQ9ULU8 1353 aa26.29■■□□□ 1.8
ARF3-203ENST00000472621 PDS5BQ9NTI5 1447 aa26.23■■□□□ 1.79
ARF3-203ENST00000472621 THOC2Q8NI27 1593 aaKnown RBP26.16■■□□□ 1.78
ARF3-203ENST00000472621 KIF21AQ7Z4S6 1674 aa26.14■■□□□ 1.78
ARF3-203ENST00000472621 CFTRP13569 1480 aa26.09■■□□□ 1.77
ARF3-203ENST00000472621 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
ARF3-203ENST00000472621 MRC2Q9UBG0 1479 aa25.98■■□□□ 1.75
ARF3-203ENST00000472621 FANCD2Q9BXW9 1451 aa25.96■■□□□ 1.75
ARF3-203ENST00000472621 CEP164Q9UPV0 1460 aa25.94■■□□□ 1.74
ARF3-203ENST00000472621 WDR62O43379 1518 aa25.92■■□□□ 1.74
ARF3-203ENST00000472621 DNAJC5Q9H3Z4 198 aa25.83■■□□□ 1.73
ARF3-203ENST00000472621 PRDM2Q13029 1718 aa25.81■■□□□ 1.72
ARF3-203ENST00000472621 URB2Q14146 1524 aaKnown RBP25.73■■□□□ 1.71
ARF3-203ENST00000472621 SUPT5HO00267 1087 aaKnown RBP25.55■■□□□ 1.68
ARF3-203ENST00000472621 TOPBP1Q92547 1522 aa25.53■■□□□ 1.68
ARF3-203ENST00000472621 ABCC8Q09428 1581 aa25.52■■□□□ 1.68
ARF3-203ENST00000472621 DNMBPQ6XZF7 1577 aa25.48■■□□□ 1.67
ARF3-203ENST00000472621 IFT140Q96RY7 1462 aa25.44■■□□□ 1.66
ARF3-203ENST00000472621 ZNF608Q9ULD9 1512 aaPredicted RBP25.33■■□□□ 1.65
ARF3-203ENST00000472621 POLA1P09884 1462 aaPredicted RBP25.3■■□□□ 1.64
ARF3-203ENST00000472621 TARBP1Q13395 1621 aaKnown RBP25.28■■□□□ 1.64
ARF3-203ENST00000472621 CUX1P39880 1505 aa25.24■■□□□ 1.63
ARF3-203ENST00000472621 EIF4G3O43432 1585 aaKnown RBP25.2■■□□□ 1.62
ARF3-203ENST00000472621 FGD5Q6ZNL6 1462 aa25.19■■□□□ 1.62
ARF3-203ENST00000472621 RAD54L2Q9Y4B4 1467 aa25.18■■□□□ 1.62
ARF3-203ENST00000472621 SOGA1O94964 1423 aa25.18■■□□□ 1.62
ARF3-203ENST00000472621 OSCARQ8IYS5 282 aa25.16■■□□□ 1.62
ARF3-203ENST00000472621 AQRO60306 1485 aaKnown RBP eCLIP25.15■■□□□ 1.62
ARF3-203ENST00000472621 WDR97A6NE52 1622 aa25.08■■□□□ 1.6
ARF3-203ENST00000472621 TDRD9Q8NDG6 1382 aaKnown RBP25.06■■□□□ 1.6
ARF3-203ENST00000472621 WRNQ14191 1432 aaPredicted RBP eCLIP24.98■■□□□ 1.59
ARF3-203ENST00000472621 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
ARF3-203ENST00000472621 TOP2BQ02880 1626 aa24.95■■□□□ 1.58
ARF3-203ENST00000472621 BIVM-ERCC5R4GMW8 1640 aa24.94■■□□□ 1.58
ARF3-203ENST00000472621 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
ARF3-203ENST00000472621 GRIN2BQ13224 1484 aa24.92■■□□□ 1.58
ARF3-203ENST00000472621 CHD1O14646 1710 aa24.92■■□□□ 1.58
ARF3-203ENST00000472621 SNAPC4Q5SXM2 1469 aa24.9■■□□□ 1.58
ARF3-203ENST00000472621 MAGI1Q96QZ7 1491 aaPredicted RBP24.89■■□□□ 1.57
ARF3-203ENST00000472621 GAPVD1Q14C86 1478 aa24.88■■□□□ 1.57
ARF3-203ENST00000472621 ABCA5Q8WWZ7 1642 aa24.86■■□□□ 1.57
ARF3-203ENST00000472621 FBLN2P98095 1184 aa24.84■■□□□ 1.57
ARF3-203ENST00000472621 PBRM1Q86U86 1689 aa24.81■■□□□ 1.56
ARF3-203ENST00000472621 SYNJ2O15056 1496 aa24.8■■□□□ 1.56
ARF3-203ENST00000472621 RIMBP3CA6NJZ7 1639 aa24.77■■□□□ 1.56
ARF3-203ENST00000472621 RIMBP3BA6NNM3 1639 aa24.77■■□□□ 1.56
ARF3-203ENST00000472621 RIMBP3Q9UFD9 1639 aa24.77■■□□□ 1.56
ARF3-203ENST00000472621 CHMP7Q8WUX9 453 aaPredicted RBP24.77■■□□□ 1.56
ARF3-203ENST00000472621 TRIM41Q8WV44 630 aa24.77■■□□□ 1.56
ARF3-203ENST00000472621 ARHGEF11O15085 1522 aa24.76■■□□□ 1.55
ARF3-203ENST00000472621 CLASP1Q7Z460 1538 aa24.7■■□□□ 1.54
ARF3-203ENST00000472621 ADAMTS12P58397 1594 aa24.64■■□□□ 1.54
ARF3-203ENST00000472621 ERICH3Q5RHP9 1530 aa24.64■■□□□ 1.53
ARF3-203ENST00000472621 FHAD1B1AJZ9 1412 aa24.61■■□□□ 1.53
ARF3-203ENST00000472621 GRIN2AQ12879 1464 aa24.59■■□□□ 1.53
ARF3-203ENST00000472621 ARAP1Q96P48 1450 aa24.56■■□□□ 1.52
ARF3-203ENST00000472621 NUP160Q12769 1436 aa24.53■■□□□ 1.52
ARF3-203ENST00000472621 CYB5RLQ6IPT4 315 aa24.51■■□□□ 1.51
ARF3-203ENST00000472621 CEP170Q5SW79 1584 aa24.48■■□□□ 1.51
ARF3-203ENST00000472621 KIF27Q86VH2 1401 aa24.48■■□□□ 1.51
ARF3-203ENST00000472621 IGF1RP08069 1367 aa24.44■■□□□ 1.5
ARF3-203ENST00000472621 SHROOM2Q13796 1616 aa24.36■■□□□ 1.49
ARF3-203ENST00000472621 CUL7Q14999 1698 aa24.34■■□□□ 1.49
ARF3-203ENST00000472621 ERCC6L2Q5T890 1561 aa24.31■■□□□ 1.48
ARF3-203ENST00000472621 RUSC2Q8N2Y8 1516 aa24.28■■□□□ 1.48
ARF3-203ENST00000472621 CARMIL1Q5VZK9 1371 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 474.1 ms