RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 NISCHQ9Y2I1 1504 aa41.62■■■■■ 4.25
PKD1-208ENST00000472577 ABCC9O60706 1549 aa37.63■■■■□ 3.61
PKD1-208ENST00000472577 CCDC180Q9P1Z9 1646 aa37.45■■■■□ 3.59
PKD1-208ENST00000472577 RB1CC1Q8TDY2 1594 aa35.68■■■■□ 3.3
PKD1-208ENST00000472577 DNAJC5BQ9UF47 199 aa35.45■■■■□ 3.27
PKD1-208ENST00000472577 NACADO15069 1562 aa35.38■■■■□ 3.25
PKD1-208ENST00000472577 DCAF8L2P0C7V8 631 aa35.09■■■■□ 3.21
PKD1-208ENST00000472577 UNC13AQ9UPW8 1703 aa35■■■■□ 3.19
PKD1-208ENST00000472577 PABPN1Q86U42 306 aaKnown RBP eCLIP34.96■■■■□ 3.19
PKD1-208ENST00000472577 MYO15BQ96JP2 1530 aa34.83■■■■□ 3.17
PKD1-208ENST00000472577 BICRAQ9NZM4 1560 aa34.75■■■■□ 3.15
PKD1-208ENST00000472577 ZCCHC6Q5VYS8 1495 aaKnown RBP34.55■■■■□ 3.12
PKD1-208ENST00000472577 DCAF1Q9Y4B6 1507 aa34.34■■■■□ 3.09
PKD1-208ENST00000472577 SCRIBQ14160 1630 aa34.15■■■■□ 3.06
PKD1-208ENST00000472577 SHROOM4Q9ULL8 1493 aa34.15■■■■□ 3.06
PKD1-208ENST00000472577 CC2D2AQ9P2K1 1620 aa33.99■■■■□ 3.03
PKD1-208ENST00000472577 CECR2Q9BXF3 1484 aa33.88■■■■□ 3.01
PKD1-208ENST00000472577 EIF4G1Q04637 1599 aaKnown RBP33.87■■■■□ 3.01
PKD1-208ENST00000472577 NCAPD3P42695 1498 aa32.67■■■□□ 2.82
PKD1-208ENST00000472577 DNAJC5Q9H3Z4 198 aa32.58■■■□□ 2.81
PKD1-208ENST00000472577 ATAD2BQ9ULI0 1458 aa32.58■■■□□ 2.81
PKD1-208ENST00000472577 SMARCA4P51532 1647 aa32.55■■■□□ 2.8
PKD1-208ENST00000472577 HMGXB3Q12766 1538 aa32.46■■■□□ 2.79
PKD1-208ENST00000472577 SMARCA2P51531 1590 aa32.45■■■□□ 2.79
PKD1-208ENST00000472577 CUX2O14529 1486 aa32.45■■■□□ 2.79
PKD1-208ENST00000472577 ERCC6Q03468 1493 aa32.44■■■□□ 2.78
PKD1-208ENST00000472577 NESP48681 1621 aa32.31■■■□□ 2.76
PKD1-208ENST00000472577 BAZ1AQ9NRL2 1556 aaPredicted RBP32.3■■■□□ 2.76
PKD1-208ENST00000472577 BAZ1BQ9UIG0 1483 aaKnown RBP32.24■■■□□ 2.75
PKD1-208ENST00000472577 PEG3Q9GZU2 1588 aa32.2■■■□□ 2.75
PKD1-208ENST00000472577 MROH2BQ7Z745 1585 aa32.11■■■□□ 2.73
PKD1-208ENST00000472577 THOC2Q8NI27 1593 aaKnown RBP32.04■■■□□ 2.72
PKD1-208ENST00000472577 LAMC3Q9Y6N6 1575 aa31.98■■■□□ 2.71
PKD1-208ENST00000472577 KIF21AQ7Z4S6 1674 aa31.9■■■□□ 2.7
PKD1-208ENST00000472577 PDS5BQ9NTI5 1447 aa31.74■■■□□ 2.67
PKD1-208ENST00000472577 WIZO95785 1651 aa31.73■■■□□ 2.67
PKD1-208ENST00000472577 CADPSQ9ULU8 1353 aa31.65■■■□□ 2.66
PKD1-208ENST00000472577 RSF1Q96T23 1441 aaPredicted RBP31.64■■■□□ 2.66
PKD1-208ENST00000472577 MRC2Q9UBG0 1479 aa31.56■■■□□ 2.64
PKD1-208ENST00000472577 WDR62O43379 1518 aa31.51■■■□□ 2.63
PKD1-208ENST00000472577 CEP164Q9UPV0 1460 aa31.4■■■□□ 2.62
PKD1-208ENST00000472577 FANCD2Q9BXW9 1451 aa31.33■■■□□ 2.61
PKD1-208ENST00000472577 CFTRP13569 1480 aa31.29■■■□□ 2.6
PKD1-208ENST00000472577 TOP2AP11388 1531 aaKnown RBP31.29■■■□□ 2.6
PKD1-208ENST00000472577 URB2Q14146 1524 aaKnown RBP31.14■■■□□ 2.58
PKD1-208ENST00000472577 TRIM41Q8WV44 630 aa31.11■■■□□ 2.57
PKD1-208ENST00000472577 SUPT5HO00267 1087 aaKnown RBP31.02■■■□□ 2.56
PKD1-208ENST00000472577 PRDM2Q13029 1718 aa31.01■■■□□ 2.56
PKD1-208ENST00000472577 CCDC88BA6NC98 1476 aa30.91■■■□□ 2.54
PKD1-208ENST00000472577 OSCARQ8IYS5 282 aa30.85■■■□□ 2.53
PKD1-208ENST00000472577 ZNF608Q9ULD9 1512 aaPredicted RBP30.79■■■□□ 2.52
PKD1-208ENST00000472577 TOPBP1Q92547 1522 aa30.74■■■□□ 2.51
PKD1-208ENST00000472577 IFT140Q96RY7 1462 aa30.74■■■□□ 2.51
PKD1-208ENST00000472577 EIF4G3O43432 1585 aaKnown RBP30.63■■■□□ 2.49
PKD1-208ENST00000472577 RIMBP3CA6NJZ7 1639 aa30.63■■■□□ 2.49
PKD1-208ENST00000472577 RIMBP3BA6NNM3 1639 aa30.63■■■□□ 2.49
PKD1-208ENST00000472577 RIMBP3Q9UFD9 1639 aa30.63■■■□□ 2.49
PKD1-208ENST00000472577 DNMBPQ6XZF7 1577 aa30.62■■■□□ 2.49
PKD1-208ENST00000472577 ABCC8Q09428 1581 aa30.55■■■□□ 2.48
PKD1-208ENST00000472577 TARBP1Q13395 1621 aaKnown RBP30.52■■■□□ 2.48
PKD1-208ENST00000472577 ARHGEF11O15085 1522 aa30.49■■■□□ 2.47
PKD1-208ENST00000472577 AQRO60306 1485 aaKnown RBP eCLIP30.44■■■□□ 2.46
PKD1-208ENST00000472577 CHD1O14646 1710 aa30.44■■■□□ 2.46
PKD1-208ENST00000472577 POLA1P09884 1462 aaPredicted RBP30.43■■■□□ 2.46
PKD1-208ENST00000472577 RAD54L2Q9Y4B4 1467 aa30.32■■■□□ 2.44
PKD1-208ENST00000472577 FGD5Q6ZNL6 1462 aa30.22■■■□□ 2.43
PKD1-208ENST00000472577 SOGA1O94964 1423 aa30.22■■■□□ 2.43
PKD1-208ENST00000472577 ARAP1Q96P48 1450 aa30.21■■■□□ 2.43
PKD1-208ENST00000472577 TDRD9Q8NDG6 1382 aaKnown RBP30.21■■■□□ 2.43
PKD1-208ENST00000472577 FBLN2P98095 1184 aa30.19■■■□□ 2.42
PKD1-208ENST00000472577 CUX1P39880 1505 aa30.18■■■□□ 2.42
PKD1-208ENST00000472577 CYB5RLQ6IPT4 315 aa30.18■■■□□ 2.42
PKD1-208ENST00000472577 SNAPC4Q5SXM2 1469 aa30.16■■■□□ 2.42
PKD1-208ENST00000472577 WDR97A6NE52 1622 aa30.11■■■□□ 2.41
PKD1-208ENST00000472577 CLASP1Q7Z460 1538 aa30.07■■■□□ 2.4
PKD1-208ENST00000472577 MAGI1Q96QZ7 1491 aaPredicted RBP30.02■■■□□ 2.4
PKD1-208ENST00000472577 GRIN2BQ13224 1484 aa29.99■■■□□ 2.39
PKD1-208ENST00000472577 SYNJ1O43426 1573 aa29.97■■■□□ 2.39
PKD1-208ENST00000472577 PBRM1Q86U86 1689 aa29.95■■■□□ 2.39
PKD1-208ENST00000472577 SYNJ2O15056 1496 aa29.93■■■□□ 2.38
PKD1-208ENST00000472577 CHMP7Q8WUX9 453 aaPredicted RBP29.92■■■□□ 2.38
PKD1-208ENST00000472577 GAPVD1Q14C86 1478 aa29.87■■■□□ 2.37
PKD1-208ENST00000472577 ABCA5Q8WWZ7 1642 aa29.87■■■□□ 2.37
PKD1-208ENST00000472577 TRHP20396 242 aaPredicted RBP29.87■■■□□ 2.37
PKD1-208ENST00000472577 ABCA10Q8WWZ4 1543 aa29.83■■■□□ 2.37
PKD1-208ENST00000472577 WRNQ14191 1432 aaPredicted RBP eCLIP29.81■■■□□ 2.36
PKD1-208ENST00000472577 BIVM-ERCC5R4GMW8 1640 aa29.74■■■□□ 2.35
PKD1-208ENST00000472577 TOP2BQ02880 1626 aa29.73■■■□□ 2.35
PKD1-208ENST00000472577 ADAMTS12P58397 1594 aa29.66■■■□□ 2.34
PKD1-208ENST00000472577 GRIN2AQ12879 1464 aa29.64■■■□□ 2.34
PKD1-208ENST00000472577 ERCC6L2Q5T890 1561 aa29.64■■■□□ 2.33
PKD1-208ENST00000472577 CEP170Q5SW79 1584 aa29.6■■■□□ 2.33
PKD1-208ENST00000472577 NUP160Q12769 1436 aa29.55■■■□□ 2.32
PKD1-208ENST00000472577 SHROOM2Q13796 1616 aa29.48■■■□□ 2.31
PKD1-208ENST00000472577 FHAD1B1AJZ9 1412 aa29.46■■■□□ 2.31
PKD1-208ENST00000472577 ERICH3Q5RHP9 1530 aa29.45■■■□□ 2.3
PKD1-208ENST00000472577 RUSC2Q8N2Y8 1516 aa29.26■■■□□ 2.27
PKD1-208ENST00000472577 PRG4Q92954 1404 aaPredicted RBP29.24■■■□□ 2.27
PKD1-208ENST00000472577 KIF13AQ9H1H9 1805 aa29.18■■■□□ 2.26
PKD1-208ENST00000472577 KIF27Q86VH2 1401 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms