RNA–Protein interactions for RNA: ENST00000472503.5

TMEM39B-206, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 950 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-206ENST00000472503 NISCHQ9Y2I1 1504 aa30.51■■■□□ 2.47
TMEM39B-206ENST00000472503 CCDC180Q9P1Z9 1646 aa27.19■■□□□ 1.94
TMEM39B-206ENST00000472503 ABCC9O60706 1549 aa26.98■■□□□ 1.91
TMEM39B-206ENST00000472503 RB1CC1Q8TDY2 1594 aa25.77■■□□□ 1.72
TMEM39B-206ENST00000472503 NACADO15069 1562 aa25.6■■□□□ 1.69
TMEM39B-206ENST00000472503 DCAF8L2P0C7V8 631 aa25.53■■□□□ 1.68
TMEM39B-206ENST00000472503 ZCCHC6Q5VYS8 1495 aaKnown RBP25.53■■□□□ 1.68
TMEM39B-206ENST00000472503 DCAF1Q9Y4B6 1507 aa25.3■■□□□ 1.64
TMEM39B-206ENST00000472503 UNC13AQ9UPW8 1703 aa25.26■■□□□ 1.63
TMEM39B-206ENST00000472503 MYO15BQ96JP2 1530 aa25.25■■□□□ 1.63
TMEM39B-206ENST00000472503 PABPN1Q86U42 306 aaKnown RBP eCLIP25.1■■□□□ 1.61
TMEM39B-206ENST00000472503 DNAJC5BQ9UF47 199 aa25.01■■□□□ 1.59
TMEM39B-206ENST00000472503 BICRAQ9NZM4 1560 aa24.97■■□□□ 1.59
TMEM39B-206ENST00000472503 SCRIBQ14160 1630 aa24.83■■□□□ 1.57
TMEM39B-206ENST00000472503 SHROOM4Q9ULL8 1493 aa24.64■■□□□ 1.53
TMEM39B-206ENST00000472503 CC2D2AQ9P2K1 1620 aa24.39■■□□□ 1.49
TMEM39B-206ENST00000472503 EIF4G1Q04637 1599 aaKnown RBP24.37■■□□□ 1.49
TMEM39B-206ENST00000472503 CECR2Q9BXF3 1484 aa24.26■■□□□ 1.47
TMEM39B-206ENST00000472503 SMARCA4P51532 1647 aa23.66■■□□□ 1.38
TMEM39B-206ENST00000472503 BAZ1AQ9NRL2 1556 aaPredicted RBP23.58■■□□□ 1.37
TMEM39B-206ENST00000472503 NCAPD3P42695 1498 aa23.57■■□□□ 1.36
TMEM39B-206ENST00000472503 ATAD2BQ9ULI0 1458 aa23.56■■□□□ 1.36
TMEM39B-206ENST00000472503 SMARCA2P51531 1590 aa23.56■■□□□ 1.36
TMEM39B-206ENST00000472503 MROH2BQ7Z745 1585 aa23.52■■□□□ 1.36
TMEM39B-206ENST00000472503 HMGXB3Q12766 1538 aa23.49■■□□□ 1.35
TMEM39B-206ENST00000472503 RSF1Q96T23 1441 aaPredicted RBP23.43■■□□□ 1.34
TMEM39B-206ENST00000472503 BAZ1BQ9UIG0 1483 aaKnown RBP23.41■■□□□ 1.34
TMEM39B-206ENST00000472503 PEG3Q9GZU2 1588 aa23.37■■□□□ 1.33
TMEM39B-206ENST00000472503 WIZO95785 1651 aa23.32■■□□□ 1.32
TMEM39B-206ENST00000472503 ERCC6Q03468 1493 aa23.3■■□□□ 1.32
TMEM39B-206ENST00000472503 NESP48681 1621 aa23.22■■□□□ 1.31
TMEM39B-206ENST00000472503 CUX2O14529 1486 aa23.13■■□□□ 1.29
TMEM39B-206ENST00000472503 SUPT5HO00267 1087 aaKnown RBP23.13■■□□□ 1.29
TMEM39B-206ENST00000472503 LAMC3Q9Y6N6 1575 aa23.1■■□□□ 1.29
TMEM39B-206ENST00000472503 TOP2AP11388 1531 aaKnown RBP23.07■■□□□ 1.28
TMEM39B-206ENST00000472503 KIF21AQ7Z4S6 1674 aa23.01■■□□□ 1.27
TMEM39B-206ENST00000472503 THOC2Q8NI27 1593 aaKnown RBP22.98■■□□□ 1.27
TMEM39B-206ENST00000472503 PDS5BQ9NTI5 1447 aa22.91■■□□□ 1.26
TMEM39B-206ENST00000472503 CADPSQ9ULU8 1353 aa22.88■■□□□ 1.25
TMEM39B-206ENST00000472503 DNAJC5Q9H3Z4 198 aa22.81■■□□□ 1.24
TMEM39B-206ENST00000472503 CCDC88BA6NC98 1476 aa22.79■■□□□ 1.24
TMEM39B-206ENST00000472503 MRC2Q9UBG0 1479 aa22.74■■□□□ 1.23
TMEM39B-206ENST00000472503 CEP164Q9UPV0 1460 aa22.72■■□□□ 1.23
TMEM39B-206ENST00000472503 WDR62O43379 1518 aa22.68■■□□□ 1.22
TMEM39B-206ENST00000472503 FANCD2Q9BXW9 1451 aa22.68■■□□□ 1.22
TMEM39B-206ENST00000472503 CFTRP13569 1480 aa22.67■■□□□ 1.22
TMEM39B-206ENST00000472503 PRDM2Q13029 1718 aa22.62■■□□□ 1.21
TMEM39B-206ENST00000472503 URB2Q14146 1524 aaKnown RBP22.47■■□□□ 1.19
TMEM39B-206ENST00000472503 TOPBP1Q92547 1522 aa22.27■■□□□ 1.16
TMEM39B-206ENST00000472503 DNMBPQ6XZF7 1577 aa22.23■■□□□ 1.15
TMEM39B-206ENST00000472503 IFT140Q96RY7 1462 aa22.21■■□□□ 1.15
TMEM39B-206ENST00000472503 ABCC8Q09428 1581 aa22.2■■□□□ 1.14
TMEM39B-206ENST00000472503 ZNF608Q9ULD9 1512 aaPredicted RBP22.16■■□□□ 1.14
TMEM39B-206ENST00000472503 EIF4G3O43432 1585 aaKnown RBP22.12■■□□□ 1.13
TMEM39B-206ENST00000472503 TARBP1Q13395 1621 aaKnown RBP22.06■■□□□ 1.12
TMEM39B-206ENST00000472503 OSCARQ8IYS5 282 aa22.06■■□□□ 1.12
TMEM39B-206ENST00000472503 POLA1P09884 1462 aaPredicted RBP22.05■■□□□ 1.12
TMEM39B-206ENST00000472503 CUX1P39880 1505 aa22.04■■□□□ 1.12
TMEM39B-206ENST00000472503 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.12
TMEM39B-206ENST00000472503 TRIM41Q8WV44 630 aa22.02■■□□□ 1.12
TMEM39B-206ENST00000472503 SYNJ1O43426 1573 aa22.01■■□□□ 1.11
TMEM39B-206ENST00000472503 BIVM-ERCC5R4GMW8 1640 aa22.01■■□□□ 1.11
TMEM39B-206ENST00000472503 TOP2BQ02880 1626 aa21.99■■□□□ 1.11
TMEM39B-206ENST00000472503 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
TMEM39B-206ENST00000472503 AQRO60306 1485 aaKnown RBP eCLIP21.97■■□□□ 1.116e-6■■■■□ 25.1
TMEM39B-206ENST00000472503 RAD54L2Q9Y4B4 1467 aa21.97■■□□□ 1.11
TMEM39B-206ENST00000472503 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
TMEM39B-206ENST00000472503 CHD1O14646 1710 aa21.96■■□□□ 1.11
TMEM39B-206ENST00000472503 SOGA1O94964 1423 aa21.93■■□□□ 1.1
TMEM39B-206ENST00000472503 RIMBP3CA6NJZ7 1639 aa21.87■■□□□ 1.09
TMEM39B-206ENST00000472503 RIMBP3BA6NNM3 1639 aa21.87■■□□□ 1.09
TMEM39B-206ENST00000472503 RIMBP3Q9UFD9 1639 aa21.87■■□□□ 1.09
TMEM39B-206ENST00000472503 TDRD9Q8NDG6 1382 aaKnown RBP21.87■■□□□ 1.09
TMEM39B-206ENST00000472503 WDR97A6NE52 1622 aa21.85■■□□□ 1.09
TMEM39B-206ENST00000472503 FBLN2P98095 1184 aa21.82■■□□□ 1.08
TMEM39B-206ENST00000472503 SNAPC4Q5SXM2 1469 aa21.81■■□□□ 1.08
TMEM39B-206ENST00000472503 ARHGEF11O15085 1522 aa21.79■■□□□ 1.08
TMEM39B-206ENST00000472503 PBRM1Q86U86 1689 aa21.78■■□□□ 1.08
TMEM39B-206ENST00000472503 GRIN2BQ13224 1484 aa21.74■■□□□ 1.07
TMEM39B-206ENST00000472503 MAGI1Q96QZ7 1491 aaPredicted RBP21.72■■□□□ 1.07
TMEM39B-206ENST00000472503 GAPVD1Q14C86 1478 aa21.7■■□□□ 1.06
TMEM39B-206ENST00000472503 ABCA5Q8WWZ7 1642 aa21.69■■□□□ 1.06
TMEM39B-206ENST00000472503 ABCA10Q8WWZ4 1543 aa21.69■■□□□ 1.06
TMEM39B-206ENST00000472503 CHMP7Q8WUX9 453 aaPredicted RBP21.66■■□□□ 1.06
TMEM39B-206ENST00000472503 SYNJ2O15056 1496 aa21.64■■□□□ 1.06
TMEM39B-206ENST00000472503 CLASP1Q7Z460 1538 aa21.62■■□□□ 1.05
TMEM39B-206ENST00000472503 ARAP1Q96P48 1450 aa21.58■■□□□ 1.04
TMEM39B-206ENST00000472503 CYB5RLQ6IPT4 315 aa21.57■■□□□ 1.04
TMEM39B-206ENST00000472503 RUSC2Q8N2Y8 1516 aa21.56■■□□□ 1.04
TMEM39B-206ENST00000472503 ADAMTS12P58397 1594 aa21.53■■□□□ 1.04
TMEM39B-206ENST00000472503 KIF27Q86VH2 1401 aa21.52■■□□□ 1.04
TMEM39B-206ENST00000472503 EEA1Q15075 1411 aa21.48■■□□□ 1.03
TMEM39B-206ENST00000472503 GRIN2AQ12879 1464 aa21.47■■□□□ 1.03
TMEM39B-206ENST00000472503 ERICH3Q5RHP9 1530 aa21.44■■□□□ 1.02
TMEM39B-206ENST00000472503 IGF1RP08069 1367 aa21.42■■□□□ 1.02
TMEM39B-206ENST00000472503 CEP170Q5SW79 1584 aa21.41■■□□□ 1.02
TMEM39B-206ENST00000472503 FHAD1B1AJZ9 1412 aa21.4■■□□□ 1.02
TMEM39B-206ENST00000472503 CSRNP3Q8WYN3 585 aa21.37■■□□□ 1.01
TMEM39B-206ENST00000472503 NUP160Q12769 1436 aa21.36■■□□□ 1.01
TMEM39B-206ENST00000472503 FAM9AQ8IZU1 332 aaPredicted RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms