RNA–Protein interactions for RNA: ENST00000472431.1

NSMCE4A-207, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 819 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-207ENST00000472431 NISCHQ9Y2I1 1504 aa36.59■■■■□ 3.45
NSMCE4A-207ENST00000472431 ABCC9O60706 1549 aa33.09■■■□□ 2.89
NSMCE4A-207ENST00000472431 CCDC180Q9P1Z9 1646 aa32.89■■■□□ 2.86
NSMCE4A-207ENST00000472431 RB1CC1Q8TDY2 1594 aa31.37■■■□□ 2.61
NSMCE4A-207ENST00000472431 DNAJC5BQ9UF47 199 aa31.23■■■□□ 2.59
NSMCE4A-207ENST00000472431 NACADO15069 1562 aa31.11■■■□□ 2.57
NSMCE4A-207ENST00000472431 DCAF8L2P0C7V8 631 aa30.94■■■□□ 2.54
NSMCE4A-207ENST00000472431 UNC13AQ9UPW8 1703 aa30.79■■■□□ 2.52
NSMCE4A-207ENST00000472431 PABPN1Q86U42 306 aaKnown RBP eCLIP30.79■■■□□ 2.52
NSMCE4A-207ENST00000472431 MYO15BQ96JP2 1530 aa30.6■■■□□ 2.49
NSMCE4A-207ENST00000472431 BICRAQ9NZM4 1560 aa30.55■■■□□ 2.48
NSMCE4A-207ENST00000472431 ZCCHC6Q5VYS8 1495 aaKnown RBP30.29■■■□□ 2.44
NSMCE4A-207ENST00000472431 DCAF1Q9Y4B6 1507 aa30.17■■■□□ 2.42
NSMCE4A-207ENST00000472431 SCRIBQ14160 1630 aa30.01■■■□□ 2.39
NSMCE4A-207ENST00000472431 SHROOM4Q9ULL8 1493 aa29.98■■■□□ 2.39
NSMCE4A-207ENST00000472431 CC2D2AQ9P2K1 1620 aa29.89■■■□□ 2.37
NSMCE4A-207ENST00000472431 CECR2Q9BXF3 1484 aa29.8■■■□□ 2.36
NSMCE4A-207ENST00000472431 EIF4G1Q04637 1599 aaKnown RBP29.77■■■□□ 2.36
NSMCE4A-207ENST00000472431 NCAPD3P42695 1498 aa28.73■■■□□ 2.19
NSMCE4A-207ENST00000472431 DNAJC5Q9H3Z4 198 aa28.71■■■□□ 2.19
NSMCE4A-207ENST00000472431 ATAD2BQ9ULI0 1458 aa28.65■■■□□ 2.18
NSMCE4A-207ENST00000472431 SMARCA4P51532 1647 aa28.6■■■□□ 2.17
NSMCE4A-207ENST00000472431 ERCC6Q03468 1493 aa28.53■■■□□ 2.16
NSMCE4A-207ENST00000472431 SMARCA2P51531 1590 aa28.52■■■□□ 2.16
NSMCE4A-207ENST00000472431 CUX2O14529 1486 aa28.51■■■□□ 2.15
NSMCE4A-207ENST00000472431 HMGXB3Q12766 1538 aa28.5■■■□□ 2.15
NSMCE4A-207ENST00000472431 NESP48681 1621 aa28.41■■■□□ 2.14
NSMCE4A-207ENST00000472431 BAZ1AQ9NRL2 1556 aaPredicted RBP28.38■■■□□ 2.13
NSMCE4A-207ENST00000472431 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
NSMCE4A-207ENST00000472431 PEG3Q9GZU2 1588 aa28.29■■■□□ 2.12
NSMCE4A-207ENST00000472431 MROH2BQ7Z745 1585 aa28.24■■■□□ 2.11
NSMCE4A-207ENST00000472431 THOC2Q8NI27 1593 aaKnown RBP28.13■■■□□ 2.09
NSMCE4A-207ENST00000472431 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
NSMCE4A-207ENST00000472431 KIF21AQ7Z4S6 1674 aa28.05■■■□□ 2.08
NSMCE4A-207ENST00000472431 PDS5BQ9NTI5 1447 aa27.92■■■□□ 2.06
NSMCE4A-207ENST00000472431 WIZO95785 1651 aa27.91■■■□□ 2.06
NSMCE4A-207ENST00000472431 CADPSQ9ULU8 1353 aa27.85■■■□□ 2.05
NSMCE4A-207ENST00000472431 MRC2Q9UBG0 1479 aa27.73■■■□□ 2.03
NSMCE4A-207ENST00000472431 WDR62O43379 1518 aa27.68■■■□□ 2.02
NSMCE4A-207ENST00000472431 CEP164Q9UPV0 1460 aa27.57■■■□□ 2
NSMCE4A-207ENST00000472431 RSF1Q96T23 1441 aaPredicted RBP27.56■■■□□ 2
NSMCE4A-207ENST00000472431 FANCD2Q9BXW9 1451 aa27.55■■■□□ 2
NSMCE4A-207ENST00000472431 CFTRP13569 1480 aa27.51■■□□□ 1.99
NSMCE4A-207ENST00000472431 TOP2AP11388 1531 aaKnown RBP27.48■■□□□ 1.99
NSMCE4A-207ENST00000472431 TRIM41Q8WV44 630 aa27.41■■□□□ 1.98
NSMCE4A-207ENST00000472431 URB2Q14146 1524 aaKnown RBP27.37■■□□□ 1.97
NSMCE4A-207ENST00000472431 PRDM2Q13029 1718 aa27.27■■□□□ 1.96
NSMCE4A-207ENST00000472431 CCDC88BA6NC98 1476 aa27.19■■□□□ 1.94
NSMCE4A-207ENST00000472431 OSCARQ8IYS5 282 aa27.18■■□□□ 1.94
NSMCE4A-207ENST00000472431 ZNF608Q9ULD9 1512 aaPredicted RBP27.07■■□□□ 1.92
NSMCE4A-207ENST00000472431 TOPBP1Q92547 1522 aa27.03■■□□□ 1.92
NSMCE4A-207ENST00000472431 IFT140Q96RY7 1462 aa27.02■■□□□ 1.92
NSMCE4A-207ENST00000472431 RIMBP3CA6NJZ7 1639 aa26.93■■□□□ 1.9
NSMCE4A-207ENST00000472431 RIMBP3BA6NNM3 1639 aa26.93■■□□□ 1.9
NSMCE4A-207ENST00000472431 RIMBP3Q9UFD9 1639 aa26.93■■□□□ 1.9
NSMCE4A-207ENST00000472431 EIF4G3O43432 1585 aaKnown RBP26.9■■□□□ 1.9
NSMCE4A-207ENST00000472431 DNMBPQ6XZF7 1577 aa26.9■■□□□ 1.9
NSMCE4A-207ENST00000472431 ABCC8Q09428 1581 aa26.88■■□□□ 1.89
NSMCE4A-207ENST00000472431 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.88
NSMCE4A-207ENST00000472431 ARHGEF11O15085 1522 aa26.8■■□□□ 1.88
NSMCE4A-207ENST00000472431 AQRO60306 1485 aaKnown RBP eCLIP26.79■■□□□ 1.88
NSMCE4A-207ENST00000472431 CHD1O14646 1710 aa26.76■■□□□ 1.88
NSMCE4A-207ENST00000472431 POLA1P09884 1462 aaPredicted RBP26.74■■□□□ 1.87
NSMCE4A-207ENST00000472431 RAD54L2Q9Y4B4 1467 aa26.68■■□□□ 1.86
NSMCE4A-207ENST00000472431 FBLN2P98095 1184 aa26.6■■□□□ 1.85
NSMCE4A-207ENST00000472431 CYB5RLQ6IPT4 315 aa26.6■■□□□ 1.85
NSMCE4A-207ENST00000472431 TDRD9Q8NDG6 1382 aaKnown RBP26.59■■□□□ 1.85
NSMCE4A-207ENST00000472431 SOGA1O94964 1423 aa26.58■■□□□ 1.85
NSMCE4A-207ENST00000472431 FGD5Q6ZNL6 1462 aa26.55■■□□□ 1.84
NSMCE4A-207ENST00000472431 ARAP1Q96P48 1450 aa26.55■■□□□ 1.84
NSMCE4A-207ENST00000472431 CUX1P39880 1505 aa26.53■■□□□ 1.84
NSMCE4A-207ENST00000472431 SNAPC4Q5SXM2 1469 aa26.49■■□□□ 1.83
NSMCE4A-207ENST00000472431 WDR97A6NE52 1622 aa26.45■■□□□ 1.82
NSMCE4A-207ENST00000472431 CLASP1Q7Z460 1538 aa26.41■■□□□ 1.82
NSMCE4A-207ENST00000472431 MAGI1Q96QZ7 1491 aaPredicted RBP26.37■■□□□ 1.81
NSMCE4A-207ENST00000472431 GRIN2BQ13224 1484 aa26.36■■□□□ 1.81
NSMCE4A-207ENST00000472431 CHMP7Q8WUX9 453 aaPredicted RBP26.35■■□□□ 1.81
NSMCE4A-207ENST00000472431 SYNJ1O43426 1573 aa26.33■■□□□ 1.81
NSMCE4A-207ENST00000472431 PBRM1Q86U86 1689 aa26.32■■□□□ 1.8
NSMCE4A-207ENST00000472431 TRHP20396 242 aaPredicted RBP26.32■■□□□ 1.8
NSMCE4A-207ENST00000472431 SYNJ2O15056 1496 aa26.3■■□□□ 1.8
NSMCE4A-207ENST00000472431 GAPVD1Q14C86 1478 aa26.27■■□□□ 1.8
NSMCE4A-207ENST00000472431 ABCA5Q8WWZ7 1642 aa26.23■■□□□ 1.79
NSMCE4A-207ENST00000472431 SUPT5HO00267 1087 aaKnown RBP26.22■■□□□ 1.79
NSMCE4A-207ENST00000472431 ABCA10Q8WWZ4 1543 aa26.22■■□□□ 1.79
NSMCE4A-207ENST00000472431 WRNQ14191 1432 aaPredicted RBP eCLIP26.05■■□□□ 1.76
NSMCE4A-207ENST00000472431 GRIN2AQ12879 1464 aa26.05■■□□□ 1.76
NSMCE4A-207ENST00000472431 ERCC6L2Q5T890 1561 aa26.05■■□□□ 1.76
NSMCE4A-207ENST00000472431 BIVM-ERCC5R4GMW8 1640 aa26.05■■□□□ 1.76
NSMCE4A-207ENST00000472431 ADAMTS12P58397 1594 aa26.04■■□□□ 1.76
NSMCE4A-207ENST00000472431 TOP2BQ02880 1626 aa26.03■■□□□ 1.76
NSMCE4A-207ENST00000472431 CEP170Q5SW79 1584 aa26■■□□□ 1.75
NSMCE4A-207ENST00000472431 NUP160Q12769 1436 aa25.97■■□□□ 1.75
NSMCE4A-207ENST00000472431 FHAD1B1AJZ9 1412 aa25.91■■□□□ 1.74
NSMCE4A-207ENST00000472431 SHROOM2Q13796 1616 aa25.9■■□□□ 1.74
NSMCE4A-207ENST00000472431 ERICH3Q5RHP9 1530 aa25.87■■□□□ 1.73
NSMCE4A-207ENST00000472431 PRG4Q92954 1404 aaPredicted RBP25.73■■□□□ 1.71
NSMCE4A-207ENST00000472431 KIF13AQ9H1H9 1805 aa25.68■■□□□ 1.7
NSMCE4A-207ENST00000472431 JPH4Q96JJ6 628 aa25.68■■□□□ 1.7
NSMCE4A-207ENST00000472431 RUSC2Q8N2Y8 1516 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms