RNA–Protein interactions for RNA: ENST00000472415.1

PLXNB3-206, Transcript of plexin B3, humanhuman

TSL 2

Gene PLXNB3, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-206ENST00000472415 NISCHQ9Y2I1 1504 aa38.44■■■■□ 3.74
PLXNB3-206ENST00000472415 ABCC9O60706 1549 aa35.07■■■■□ 3.21
PLXNB3-206ENST00000472415 CCDC180Q9P1Z9 1646 aa34.58■■■■□ 3.13
PLXNB3-206ENST00000472415 DNAJC5BQ9UF47 199 aa33.18■■■□□ 2.9
PLXNB3-206ENST00000472415 RB1CC1Q8TDY2 1594 aa33.14■■■□□ 2.9
PLXNB3-206ENST00000472415 NACADO15069 1562 aa32.8■■■□□ 2.84
PLXNB3-206ENST00000472415 DCAF8L2P0C7V8 631 aa32.8■■■□□ 2.84
PLXNB3-206ENST00000472415 PABPN1Q86U42 306 aaKnown RBP eCLIP32.65■■■□□ 2.82
PLXNB3-206ENST00000472415 UNC13AQ9UPW8 1703 aa32.35■■■□□ 2.77
PLXNB3-206ENST00000472415 BICRAQ9NZM4 1560 aa32.18■■■□□ 2.74
PLXNB3-206ENST00000472415 MYO15BQ96JP2 1530 aa32.17■■■□□ 2.74
PLXNB3-206ENST00000472415 ZCCHC6Q5VYS8 1495 aaKnown RBP31.78■■■□□ 2.68
PLXNB3-206ENST00000472415 DCAF1Q9Y4B6 1507 aa31.65■■■□□ 2.66
PLXNB3-206ENST00000472415 SHROOM4Q9ULL8 1493 aa31.65■■■□□ 2.66
PLXNB3-206ENST00000472415 SCRIBQ14160 1630 aa31.63■■■□□ 2.65
PLXNB3-206ENST00000472415 CC2D2AQ9P2K1 1620 aa31.6■■■□□ 2.65
PLXNB3-206ENST00000472415 CECR2Q9BXF3 1484 aa31.6■■■□□ 2.65
PLXNB3-206ENST00000472415 EIF4G1Q04637 1599 aaKnown RBP31.45■■■□□ 2.63
PLXNB3-206ENST00000472415 DNAJC5Q9H3Z4 198 aa30.69■■■□□ 2.5
PLXNB3-206ENST00000472415 ERCC6Q03468 1493 aa30.32■■■□□ 2.44
PLXNB3-206ENST00000472415 NCAPD3P42695 1498 aa30.3■■■□□ 2.44
PLXNB3-206ENST00000472415 CUX2O14529 1486 aa30.28■■■□□ 2.44
PLXNB3-206ENST00000472415 ATAD2BQ9ULI0 1458 aa30.19■■■□□ 2.42
PLXNB3-206ENST00000472415 SMARCA2P51531 1590 aa30.07■■■□□ 2.4
PLXNB3-206ENST00000472415 SMARCA4P51532 1647 aa30.07■■■□□ 2.4
PLXNB3-206ENST00000472415 HMGXB3Q12766 1538 aa30.03■■■□□ 2.4
PLXNB3-206ENST00000472415 NESP48681 1621 aa30.03■■■□□ 2.4
PLXNB3-206ENST00000472415 BAZ1BQ9UIG0 1483 aaKnown RBP29.92■■■□□ 2.38
PLXNB3-206ENST00000472415 BAZ1AQ9NRL2 1556 aaPredicted RBP29.86■■■□□ 2.37
PLXNB3-206ENST00000472415 THOC2Q8NI27 1593 aaKnown RBP29.71■■■□□ 2.35
PLXNB3-206ENST00000472415 PEG3Q9GZU2 1588 aa29.71■■■□□ 2.35
PLXNB3-206ENST00000472415 LAMC3Q9Y6N6 1575 aa29.67■■■□□ 2.34
PLXNB3-206ENST00000472415 MROH2BQ7Z745 1585 aa29.65■■■□□ 2.34
PLXNB3-206ENST00000472415 KIF21AQ7Z4S6 1674 aa29.57■■■□□ 2.32
PLXNB3-206ENST00000472415 PDS5BQ9NTI5 1447 aa29.56■■■□□ 2.32
PLXNB3-206ENST00000472415 CADPSQ9ULU8 1353 aa29.4■■■□□ 2.3
PLXNB3-206ENST00000472415 TRIM41Q8WV44 630 aa29.35■■■□□ 2.29
PLXNB3-206ENST00000472415 MRC2Q9UBG0 1479 aa29.33■■■□□ 2.29
PLXNB3-206ENST00000472415 WIZO95785 1651 aa29.28■■■□□ 2.28
PLXNB3-206ENST00000472415 WDR62O43379 1518 aa29.23■■■□□ 2.27
PLXNB3-206ENST00000472415 CEP164Q9UPV0 1460 aa29.16■■■□□ 2.26
PLXNB3-206ENST00000472415 FANCD2Q9BXW9 1451 aa29.1■■■□□ 2.25
PLXNB3-206ENST00000472415 CFTRP13569 1480 aa28.97■■■□□ 2.23
PLXNB3-206ENST00000472415 RSF1Q96T23 1441 aaPredicted RBP28.92■■■□□ 2.22
PLXNB3-206ENST00000472415 OSCARQ8IYS5 282 aa28.9■■■□□ 2.22
PLXNB3-206ENST00000472415 URB2Q14146 1524 aaKnown RBP28.87■■■□□ 2.21
PLXNB3-206ENST00000472415 TOP2AP11388 1531 aaKnown RBP28.86■■■□□ 2.21
PLXNB3-206ENST00000472415 ZNF608Q9ULD9 1512 aaPredicted RBP28.59■■■□□ 2.17
PLXNB3-206ENST00000472415 PRDM2Q13029 1718 aa28.59■■■□□ 2.17
PLXNB3-206ENST00000472415 CCDC88BA6NC98 1476 aa28.57■■■□□ 2.16
PLXNB3-206ENST00000472415 IFT140Q96RY7 1462 aa28.56■■■□□ 2.16
PLXNB3-206ENST00000472415 RIMBP3CA6NJZ7 1639 aa28.54■■■□□ 2.16
PLXNB3-206ENST00000472415 RIMBP3BA6NNM3 1639 aa28.54■■■□□ 2.16
PLXNB3-206ENST00000472415 RIMBP3Q9UFD9 1639 aa28.54■■■□□ 2.16
PLXNB3-206ENST00000472415 TOPBP1Q92547 1522 aa28.48■■■□□ 2.15
PLXNB3-206ENST00000472415 ARHGEF11O15085 1522 aa28.43■■■□□ 2.14
PLXNB3-206ENST00000472415 EIF4G3O43432 1585 aaKnown RBP28.39■■■□□ 2.14
PLXNB3-206ENST00000472415 ABCC8Q09428 1581 aa28.36■■■□□ 2.13
PLXNB3-206ENST00000472415 DNMBPQ6XZF7 1577 aa28.33■■■□□ 2.13
PLXNB3-206ENST00000472415 CYB5RLQ6IPT4 315 aa28.31■■■□□ 2.12
PLXNB3-206ENST00000472415 AQRO60306 1485 aaKnown RBP eCLIP28.3■■■□□ 2.12
PLXNB3-206ENST00000472415 FBLN2P98095 1184 aa28.28■■■□□ 2.12
PLXNB3-206ENST00000472415 TARBP1Q13395 1621 aaKnown RBP28.23■■■□□ 2.11
PLXNB3-206ENST00000472415 CHD1O14646 1710 aa28.23■■■□□ 2.11
PLXNB3-206ENST00000472415 POLA1P09884 1462 aaPredicted RBP28.18■■■□□ 2.1
PLXNB3-206ENST00000472415 TRHP20396 242 aaPredicted RBP28.15■■■□□ 2.1
PLXNB3-206ENST00000472415 RAD54L2Q9Y4B4 1467 aa28.13■■■□□ 2.09
PLXNB3-206ENST00000472415 ARAP1Q96P48 1450 aa28.12■■■□□ 2.09
PLXNB3-206ENST00000472415 TDRD9Q8NDG6 1382 aaKnown RBP28.1■■■□□ 2.09
PLXNB3-206ENST00000472415 SOGA1O94964 1423 aa28.07■■■□□ 2.08
PLXNB3-206ENST00000472415 SNAPC4Q5SXM2 1469 aa28■■■□□ 2.07
PLXNB3-206ENST00000472415 FGD5Q6ZNL6 1462 aa27.97■■■□□ 2.07
PLXNB3-206ENST00000472415 CHMP7Q8WUX9 453 aaPredicted RBP27.95■■■□□ 2.06
PLXNB3-206ENST00000472415 CUX1P39880 1505 aa27.88■■■□□ 2.05
PLXNB3-206ENST00000472415 CLASP1Q7Z460 1538 aa27.87■■■□□ 2.05
PLXNB3-206ENST00000472415 WDR97A6NE52 1622 aa27.86■■■□□ 2.05
PLXNB3-206ENST00000472415 SYNJ1O43426 1573 aa27.86■■■□□ 2.05
PLXNB3-206ENST00000472415 MAGI1Q96QZ7 1491 aaPredicted RBP27.85■■■□□ 2.05
PLXNB3-206ENST00000472415 GRIN2BQ13224 1484 aa27.84■■■□□ 2.05
PLXNB3-206ENST00000472415 SYNJ2O15056 1496 aa27.78■■■□□ 2.04
PLXNB3-206ENST00000472415 GAPVD1Q14C86 1478 aa27.7■■■□□ 2.03
PLXNB3-206ENST00000472415 PBRM1Q86U86 1689 aa27.68■■■□□ 2.02
PLXNB3-206ENST00000472415 ABCA10Q8WWZ4 1543 aa27.58■■■□□ 2.01
PLXNB3-206ENST00000472415 ABCA5Q8WWZ7 1642 aa27.57■■■□□ 2
PLXNB3-206ENST00000472415 AEBP2Q6ZN18 517 aaPredicted RBP27.57■■■□□ 2
PLXNB3-206ENST00000472415 SUPT5HO00267 1087 aaKnown RBP27.53■■■□□ 2
PLXNB3-206ENST00000472415 GRIN2AQ12879 1464 aa27.49■■□□□ 1.99
PLXNB3-206ENST00000472415 ERCC6L2Q5T890 1561 aa27.48■■□□□ 1.99
PLXNB3-206ENST00000472415 WRNQ14191 1432 aaPredicted RBP eCLIP27.45■■□□□ 1.98
PLXNB3-206ENST00000472415 ADAMTS12P58397 1594 aa27.42■■□□□ 1.98
PLXNB3-206ENST00000472415 CEP170Q5SW79 1584 aa27.4■■□□□ 1.98
PLXNB3-206ENST00000472415 NUP160Q12769 1436 aa27.37■■□□□ 1.97
PLXNB3-206ENST00000472415 FHAD1B1AJZ9 1412 aa27.33■■□□□ 1.97
PLXNB3-206ENST00000472415 TOP2BQ02880 1626 aa27.31■■□□□ 1.96
PLXNB3-206ENST00000472415 BIVM-ERCC5R4GMW8 1640 aa27.29■■□□□ 1.96
PLXNB3-206ENST00000472415 SHROOM2Q13796 1616 aa27.26■■□□□ 1.95
PLXNB3-206ENST00000472415 ERICH3Q5RHP9 1530 aa27.23■■□□□ 1.95
PLXNB3-206ENST00000472415 PRG4Q92954 1404 aaPredicted RBP27.21■■□□□ 1.95
PLXNB3-206ENST00000472415 JPH4Q96JJ6 628 aa27.14■■□□□ 1.94
PLXNB3-206ENST00000472415 KIF13AQ9H1H9 1805 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms