RNA–Protein interactions for RNA: ENST00000472384.5

GRAMD1C-209, Transcript of GRAM domain containing 1C, humanhuman

TSL 2

Gene GRAMD1C, Length 1,162 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1C-209ENST00000472384 NISCHQ9Y2I1 1504 aa51.8■■■■■ 5.88
GRAMD1C-209ENST00000472384 ABCC9O60706 1549 aa47.2■■■■■ 5.15
GRAMD1C-209ENST00000472384 CCDC180Q9P1Z9 1646 aa46.66■■■■■ 5.06
GRAMD1C-209ENST00000472384 DNAJC5BQ9UF47 199 aa44.89■■■■■ 4.78
GRAMD1C-209ENST00000472384 RB1CC1Q8TDY2 1594 aa44.66■■■■■ 4.74
GRAMD1C-209ENST00000472384 NACADO15069 1562 aa44.25■■■■■ 4.67
GRAMD1C-209ENST00000472384 PABPN1Q86U42 306 aaKnown RBP eCLIP43.88■■■■■ 4.62
GRAMD1C-209ENST00000472384 DCAF8L2P0C7V8 631 aa43.83■■■■■ 4.61
GRAMD1C-209ENST00000472384 UNC13AQ9UPW8 1703 aa43.7■■■■■ 4.59
GRAMD1C-209ENST00000472384 MYO15BQ96JP2 1530 aa43.53■■■■■ 4.56
GRAMD1C-209ENST00000472384 BICRAQ9NZM4 1560 aa43.5■■■■■ 4.55
GRAMD1C-209ENST00000472384 ZCCHC6Q5VYS8 1495 aaKnown RBP42.82■■■■■ 4.45
GRAMD1C-209ENST00000472384 SHROOM4Q9ULL8 1493 aa42.77■■■■■ 4.44
GRAMD1C-209ENST00000472384 DCAF1Q9Y4B6 1507 aa42.76■■■■■ 4.44
GRAMD1C-209ENST00000472384 CC2D2AQ9P2K1 1620 aa42.63■■■■■ 4.41
GRAMD1C-209ENST00000472384 CECR2Q9BXF3 1484 aa42.58■■■■■ 4.41
GRAMD1C-209ENST00000472384 SCRIBQ14160 1630 aa42.48■■■■■ 4.39
GRAMD1C-209ENST00000472384 EIF4G1Q04637 1599 aaKnown RBP42.41■■■■■ 4.38
GRAMD1C-209ENST00000472384 DNAJC5Q9H3Z4 198 aa41.54■■■■■ 4.24
GRAMD1C-209ENST00000472384 NCAPD3P42695 1498 aa40.92■■■■■ 4.14
GRAMD1C-209ENST00000472384 CUX2O14529 1486 aa40.9■■■■■ 4.14
GRAMD1C-209ENST00000472384 ERCC6Q03468 1493 aa40.71■■■■■ 4.11
GRAMD1C-209ENST00000472384 ATAD2BQ9ULI0 1458 aa40.71■■■■■ 4.11
GRAMD1C-209ENST00000472384 HMGXB3Q12766 1538 aa40.52■■■■■ 4.08
GRAMD1C-209ENST00000472384 SMARCA4P51532 1647 aa40.49■■■■■ 4.07
GRAMD1C-209ENST00000472384 SMARCA2P51531 1590 aa40.49■■■■■ 4.07
GRAMD1C-209ENST00000472384 NESP48681 1621 aa40.44■■■■■ 4.06
GRAMD1C-209ENST00000472384 BAZ1BQ9UIG0 1483 aaKnown RBP40.21■■■■■ 4.03
GRAMD1C-209ENST00000472384 BAZ1AQ9NRL2 1556 aaPredicted RBP40.19■■■■■ 4.02
GRAMD1C-209ENST00000472384 PEG3Q9GZU2 1588 aa40.15■■■■■ 4.02
GRAMD1C-209ENST00000472384 THOC2Q8NI27 1593 aaKnown RBP40.13■■■■■ 4.01
GRAMD1C-209ENST00000472384 LAMC3Q9Y6N6 1575 aa40.01■■■■■ 4
GRAMD1C-209ENST00000472384 MROH2BQ7Z745 1585 aa39.93■■■■□ 3.98
GRAMD1C-209ENST00000472384 KIF21AQ7Z4S6 1674 aa39.85■■■■□ 3.97
GRAMD1C-209ENST00000472384 PDS5BQ9NTI5 1447 aa39.79■■■■□ 3.96
GRAMD1C-209ENST00000472384 CADPSQ9ULU8 1353 aa39.62■■■■□ 3.93
GRAMD1C-209ENST00000472384 MRC2Q9UBG0 1479 aa39.49■■■■□ 3.91
GRAMD1C-209ENST00000472384 WDR62O43379 1518 aa39.45■■■■□ 3.91
GRAMD1C-209ENST00000472384 TRIM41Q8WV44 630 aa39.39■■■■□ 3.9
GRAMD1C-209ENST00000472384 WIZO95785 1651 aa39.38■■■■□ 3.9
GRAMD1C-209ENST00000472384 CEP164Q9UPV0 1460 aa39.21■■■■□ 3.87
GRAMD1C-209ENST00000472384 FANCD2Q9BXW9 1451 aa39.15■■■■□ 3.86
GRAMD1C-209ENST00000472384 CFTRP13569 1480 aa39.08■■■■□ 3.85
GRAMD1C-209ENST00000472384 OSCARQ8IYS5 282 aa38.92■■■■□ 3.82
GRAMD1C-209ENST00000472384 URB2Q14146 1524 aaKnown RBP38.91■■■■□ 3.82
GRAMD1C-209ENST00000472384 RSF1Q96T23 1441 aaPredicted RBP38.9■■■■□ 3.82
GRAMD1C-209ENST00000472384 TOP2AP11388 1531 aaKnown RBP38.84■■■■□ 3.81
GRAMD1C-209ENST00000472384 PRDM2Q13029 1718 aa38.55■■■■□ 3.76
GRAMD1C-209ENST00000472384 ZNF608Q9ULD9 1512 aaPredicted RBP38.53■■■■□ 3.76
GRAMD1C-209ENST00000472384 RIMBP3CA6NJZ7 1639 aa38.5■■■■□ 3.75
GRAMD1C-209ENST00000472384 RIMBP3BA6NNM3 1639 aa38.5■■■■□ 3.75
GRAMD1C-209ENST00000472384 RIMBP3Q9UFD9 1639 aa38.5■■■■□ 3.75
GRAMD1C-209ENST00000472384 IFT140Q96RY7 1462 aa38.47■■■■□ 3.75
GRAMD1C-209ENST00000472384 CCDC88BA6NC98 1476 aa38.45■■■■□ 3.75
GRAMD1C-209ENST00000472384 TOPBP1Q92547 1522 aa38.37■■■■□ 3.73
GRAMD1C-209ENST00000472384 ARHGEF11O15085 1522 aa38.33■■■■□ 3.73
GRAMD1C-209ENST00000472384 EIF4G3O43432 1585 aaKnown RBP38.23■■■■□ 3.71
GRAMD1C-209ENST00000472384 ABCC8Q09428 1581 aa38.19■■■■□ 3.7
GRAMD1C-209ENST00000472384 DNMBPQ6XZF7 1577 aa38.15■■■■□ 3.7
GRAMD1C-209ENST00000472384 TARBP1Q13395 1621 aaKnown RBP38.09■■■■□ 3.69
GRAMD1C-209ENST00000472384 AQRO60306 1485 aaKnown RBP eCLIP38.09■■■■□ 3.69
GRAMD1C-209ENST00000472384 CYB5RLQ6IPT4 315 aa38.06■■■■□ 3.68
GRAMD1C-209ENST00000472384 CHD1O14646 1710 aa38.02■■■■□ 3.68
GRAMD1C-209ENST00000472384 POLA1P09884 1462 aaPredicted RBP37.95■■■■□ 3.67
GRAMD1C-209ENST00000472384 ARAP1Q96P48 1450 aa37.95■■■■□ 3.67
GRAMD1C-209ENST00000472384 FBLN2P98095 1184 aa37.83■■■■□ 3.65
GRAMD1C-209ENST00000472384 RAD54L2Q9Y4B4 1467 aa37.83■■■■□ 3.65
GRAMD1C-209ENST00000472384 TDRD9Q8NDG6 1382 aaKnown RBP37.75■■■■□ 3.63
GRAMD1C-209ENST00000472384 SOGA1O94964 1423 aa37.74■■■■□ 3.63
GRAMD1C-209ENST00000472384 TRHP20396 242 aaPredicted RBP37.73■■■■□ 3.63
GRAMD1C-209ENST00000472384 SNAPC4Q5SXM2 1469 aa37.64■■■■□ 3.62
GRAMD1C-209ENST00000472384 CLASP1Q7Z460 1538 aa37.64■■■■□ 3.62
GRAMD1C-209ENST00000472384 FGD5Q6ZNL6 1462 aa37.61■■■■□ 3.61
GRAMD1C-209ENST00000472384 WDR97A6NE52 1622 aa37.6■■■■□ 3.61
GRAMD1C-209ENST00000472384 CUX1P39880 1505 aa37.53■■■■□ 3.6
GRAMD1C-209ENST00000472384 MAGI1Q96QZ7 1491 aaPredicted RBP37.52■■■■□ 3.6
GRAMD1C-209ENST00000472384 CHMP7Q8WUX9 453 aaPredicted RBP37.49■■■■□ 3.59
GRAMD1C-209ENST00000472384 SYNJ1O43426 1573 aa37.48■■■■□ 3.59
GRAMD1C-209ENST00000472384 GRIN2BQ13224 1484 aa37.46■■■■□ 3.59
GRAMD1C-209ENST00000472384 SYNJ2O15056 1496 aa37.41■■■■□ 3.58
GRAMD1C-209ENST00000472384 GAPVD1Q14C86 1478 aa37.26■■■■□ 3.56
GRAMD1C-209ENST00000472384 PBRM1Q86U86 1689 aa37.25■■■■□ 3.55
GRAMD1C-209ENST00000472384 ABCA10Q8WWZ4 1543 aa37.18■■■■□ 3.54
GRAMD1C-209ENST00000472384 ABCA5Q8WWZ7 1642 aa37.17■■■■□ 3.54
GRAMD1C-209ENST00000472384 ERCC6L2Q5T890 1561 aa37.04■■■■□ 3.52
GRAMD1C-209ENST00000472384 GRIN2AQ12879 1464 aa37■■■■□ 3.51
GRAMD1C-209ENST00000472384 AEBP2Q6ZN18 517 aaPredicted RBP36.97■■■■□ 3.51
GRAMD1C-209ENST00000472384 NUP160Q12769 1436 aa36.93■■■■□ 3.5
GRAMD1C-209ENST00000472384 CEP170Q5SW79 1584 aa36.91■■■■□ 3.5
GRAMD1C-209ENST00000472384 ADAMTS12P58397 1594 aa36.91■■■■□ 3.5
GRAMD1C-209ENST00000472384 WRNQ14191 1432 aaPredicted RBP eCLIP36.87■■■■□ 3.49
GRAMD1C-209ENST00000472384 SHROOM2Q13796 1616 aa36.82■■■■□ 3.49
GRAMD1C-209ENST00000472384 FHAD1B1AJZ9 1412 aa36.77■■■■□ 3.48
GRAMD1C-209ENST00000472384 BIVM-ERCC5R4GMW8 1640 aa36.76■■■■□ 3.48
GRAMD1C-209ENST00000472384 TOP2BQ02880 1626 aa36.75■■■■□ 3.47
GRAMD1C-209ENST00000472384 SUPT5HO00267 1087 aaKnown RBP36.67■■■■□ 3.46
GRAMD1C-209ENST00000472384 ERICH3Q5RHP9 1530 aa36.67■■■■□ 3.46
GRAMD1C-209ENST00000472384 KIF13AQ9H1H9 1805 aa36.59■■■■□ 3.45
GRAMD1C-209ENST00000472384 PRG4Q92954 1404 aaPredicted RBP36.57■■■■□ 3.44
GRAMD1C-209ENST00000472384 JPH4Q96JJ6 628 aa36.52■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms