RNA–Protein interactions for RNA: ENST00000472381.5

RPUSD3-213, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 823 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-213ENST00000472381 NISCHQ9Y2I1 1504 aa50.16■■■■■ 5.62
RPUSD3-213ENST00000472381 CCDC180Q9P1Z9 1646 aa45.01■■■■■ 4.8
RPUSD3-213ENST00000472381 ABCC9O60706 1549 aa44.83■■■■■ 4.77
RPUSD3-213ENST00000472381 RB1CC1Q8TDY2 1594 aa42.78■■■■■ 4.44
RPUSD3-213ENST00000472381 NACADO15069 1562 aa42.5■■■■■ 4.39
RPUSD3-213ENST00000472381 DCAF8L2P0C7V8 631 aa42.29■■■■■ 4.36
RPUSD3-213ENST00000472381 MYO15BQ96JP2 1530 aa41.94■■■■■ 4.3
RPUSD3-213ENST00000472381 DNAJC5BQ9UF47 199 aa41.85■■■■■ 4.29
RPUSD3-213ENST00000472381 UNC13AQ9UPW8 1703 aa41.8■■■■■ 4.28
RPUSD3-213ENST00000472381 PABPN1Q86U42 306 aaKnown RBP eCLIP41.73■■■■■ 4.27
RPUSD3-213ENST00000472381 ZCCHC6Q5VYS8 1495 aaKnown RBP41.6■■■■■ 4.25
RPUSD3-213ENST00000472381 BICRAQ9NZM4 1560 aa41.46■■■■■ 4.23
RPUSD3-213ENST00000472381 DCAF1Q9Y4B6 1507 aa41.45■■■■■ 4.23
RPUSD3-213ENST00000472381 SCRIBQ14160 1630 aa41■■■■■ 4.15
RPUSD3-213ENST00000472381 SHROOM4Q9ULL8 1493 aa40.97■■■■■ 4.15
RPUSD3-213ENST00000472381 CC2D2AQ9P2K1 1620 aa40.52■■■■■ 4.08
RPUSD3-213ENST00000472381 EIF4G1Q04637 1599 aaKnown RBP40.47■■■■■ 4.07
RPUSD3-213ENST00000472381 CECR2Q9BXF3 1484 aa40.38■■■■■ 4.05
RPUSD3-213ENST00000472381 NCAPD3P42695 1498 aa39.2■■■■□ 3.87
RPUSD3-213ENST00000472381 SMARCA4P51532 1647 aa39.12■■■■□ 3.85
RPUSD3-213ENST00000472381 ATAD2BQ9ULI0 1458 aa39.1■■■■□ 3.85
RPUSD3-213ENST00000472381 SMARCA2P51531 1590 aa39.04■■■■□ 3.84
RPUSD3-213ENST00000472381 BAZ1AQ9NRL2 1556 aaPredicted RBP38.95■■■■□ 3.83
RPUSD3-213ENST00000472381 HMGXB3Q12766 1538 aa38.95■■■■□ 3.83
RPUSD3-213ENST00000472381 BAZ1BQ9UIG0 1483 aaKnown RBP38.76■■■■□ 3.8
RPUSD3-213ENST00000472381 ERCC6Q03468 1493 aa38.73■■■■□ 3.79
RPUSD3-213ENST00000472381 PEG3Q9GZU2 1588 aa38.73■■■■□ 3.79
RPUSD3-213ENST00000472381 MROH2BQ7Z745 1585 aa38.63■■■■□ 3.77
RPUSD3-213ENST00000472381 CUX2O14529 1486 aa38.6■■■■□ 3.77
RPUSD3-213ENST00000472381 NESP48681 1621 aa38.53■■■■□ 3.76
RPUSD3-213ENST00000472381 DNAJC5Q9H3Z4 198 aa38.39■■■■□ 3.74
RPUSD3-213ENST00000472381 LAMC3Q9Y6N6 1575 aa38.34■■■■□ 3.73
RPUSD3-213ENST00000472381 WIZO95785 1651 aa38.2■■■■□ 3.71
RPUSD3-213ENST00000472381 THOC2Q8NI27 1593 aaKnown RBP38.14■■■■□ 3.7
RPUSD3-213ENST00000472381 PDS5BQ9NTI5 1447 aa38.1■■■■□ 3.69
RPUSD3-213ENST00000472381 KIF21AQ7Z4S6 1674 aa38.08■■■■□ 3.69
RPUSD3-213ENST00000472381 CADPSQ9ULU8 1353 aa38.02■■■■□ 3.68
RPUSD3-213ENST00000472381 RSF1Q96T23 1441 aaPredicted RBP37.87■■■■□ 3.65
RPUSD3-213ENST00000472381 MRC2Q9UBG0 1479 aa37.76■■■■□ 3.63
RPUSD3-213ENST00000472381 TOP2AP11388 1531 aaKnown RBP37.74■■■■□ 3.63
RPUSD3-213ENST00000472381 WDR62O43379 1518 aa37.66■■■■□ 3.62
RPUSD3-213ENST00000472381 CEP164Q9UPV0 1460 aa37.64■■■■□ 3.62
RPUSD3-213ENST00000472381 CFTRP13569 1480 aa37.61■■■■□ 3.61
RPUSD3-213ENST00000472381 FANCD2Q9BXW9 1451 aa37.6■■■■□ 3.61
RPUSD3-213ENST00000472381 PRDM2Q13029 1718 aa37.33■■■■□ 3.57
RPUSD3-213ENST00000472381 CCDC88BA6NC98 1476 aa37.28■■■■□ 3.56
RPUSD3-213ENST00000472381 URB2Q14146 1524 aaKnown RBP37.26■■■■□ 3.56
RPUSD3-213ENST00000472381 TOPBP1Q92547 1522 aa36.9■■■■□ 3.5
RPUSD3-213ENST00000472381 IFT140Q96RY7 1462 aa36.88■■■■□ 3.5
RPUSD3-213ENST00000472381 ABCC8Q09428 1581 aa36.87■■■■□ 3.49
RPUSD3-213ENST00000472381 OSCARQ8IYS5 282 aa36.85■■■■□ 3.49
RPUSD3-213ENST00000472381 DNMBPQ6XZF7 1577 aa36.8■■■■□ 3.48
RPUSD3-213ENST00000472381 TRIM41Q8WV44 630 aa36.79■■■■□ 3.48
RPUSD3-213ENST00000472381 ZNF608Q9ULD9 1512 aaPredicted RBP36.78■■■■□ 3.48
RPUSD3-213ENST00000472381 EIF4G3O43432 1585 aaKnown RBP36.62■■■■□ 3.45
RPUSD3-213ENST00000472381 TARBP1Q13395 1621 aaKnown RBP36.56■■■■□ 3.44
RPUSD3-213ENST00000472381 POLA1P09884 1462 aaPredicted RBP36.52■■■■□ 3.44
RPUSD3-213ENST00000472381 AQRO60306 1485 aaKnown RBP eCLIP36.46■■■■□ 3.433e-6■■□□□ 13.8
RPUSD3-213ENST00000472381 RAD54L2Q9Y4B4 1467 aa36.37■■■■□ 3.41
RPUSD3-213ENST00000472381 RIMBP3CA6NJZ7 1639 aa36.37■■■■□ 3.41
RPUSD3-213ENST00000472381 RIMBP3BA6NNM3 1639 aa36.37■■■■□ 3.41
RPUSD3-213ENST00000472381 RIMBP3Q9UFD9 1639 aa36.37■■■■□ 3.41
RPUSD3-213ENST00000472381 SOGA1O94964 1423 aa36.36■■■■□ 3.41
RPUSD3-213ENST00000472381 CHD1O14646 1710 aa36.34■■■■□ 3.41
RPUSD3-213ENST00000472381 FGD5Q6ZNL6 1462 aa36.32■■■■□ 3.41
RPUSD3-213ENST00000472381 SUPT5HO00267 1087 aaKnown RBP36.31■■■■□ 3.4
RPUSD3-213ENST00000472381 CUX1P39880 1505 aa36.3■■■■□ 3.4
RPUSD3-213ENST00000472381 ARHGEF11O15085 1522 aa36.26■■■■□ 3.4
RPUSD3-213ENST00000472381 TDRD9Q8NDG6 1382 aaKnown RBP36.26■■■■□ 3.39
RPUSD3-213ENST00000472381 WDR97A6NE52 1622 aa36.24■■■■□ 3.39
RPUSD3-213ENST00000472381 FBLN2P98095 1184 aa36.22■■■■□ 3.39
RPUSD3-213ENST00000472381 SNAPC4Q5SXM2 1469 aa36.11■■■■□ 3.37
RPUSD3-213ENST00000472381 GRIN2BQ13224 1484 aa36.05■■■■□ 3.36
RPUSD3-213ENST00000472381 MAGI1Q96QZ7 1491 aaPredicted RBP36.05■■■■□ 3.36
RPUSD3-213ENST00000472381 CHMP7Q8WUX9 453 aaPredicted RBP35.98■■■■□ 3.35
RPUSD3-213ENST00000472381 CYB5RLQ6IPT4 315 aa35.97■■■■□ 3.35
RPUSD3-213ENST00000472381 PBRM1Q86U86 1689 aa35.95■■■■□ 3.35
RPUSD3-213ENST00000472381 GAPVD1Q14C86 1478 aa35.94■■■■□ 3.34
RPUSD3-213ENST00000472381 SYNJ1O43426 1573 aa35.92■■■■□ 3.34
RPUSD3-213ENST00000472381 ABCA10Q8WWZ4 1543 aa35.92■■■■□ 3.34
RPUSD3-213ENST00000472381 SYNJ2O15056 1496 aa35.92■■■■□ 3.34
RPUSD3-213ENST00000472381 CLASP1Q7Z460 1538 aa35.9■■■■□ 3.34
RPUSD3-213ENST00000472381 ARAP1Q96P48 1450 aa35.89■■■■□ 3.34
RPUSD3-213ENST00000472381 ABCA5Q8WWZ7 1642 aa35.86■■■■□ 3.33
RPUSD3-213ENST00000472381 WRNQ14191 1432 aaPredicted RBP eCLIP35.82■■■■□ 3.32
RPUSD3-213ENST00000472381 BIVM-ERCC5R4GMW8 1640 aa35.79■■■■□ 3.32
RPUSD3-213ENST00000472381 TOP2BQ02880 1626 aa35.79■■■■□ 3.32
RPUSD3-213ENST00000472381 ADAMTS12P58397 1594 aa35.59■■■■□ 3.29
RPUSD3-213ENST00000472381 GRIN2AQ12879 1464 aa35.59■■■■□ 3.29
RPUSD3-213ENST00000472381 TRHP20396 242 aaPredicted RBP35.55■■■■□ 3.28
RPUSD3-213ENST00000472381 FHAD1B1AJZ9 1412 aa35.49■■■■□ 3.27
RPUSD3-213ENST00000472381 ERICH3Q5RHP9 1530 aa35.48■■■■□ 3.27
RPUSD3-213ENST00000472381 CEP170Q5SW79 1584 aa35.44■■■■□ 3.26
RPUSD3-213ENST00000472381 NUP160Q12769 1436 aa35.44■■■■□ 3.26
RPUSD3-213ENST00000472381 ERCC6L2Q5T890 1561 aa35.32■■■■□ 3.24
RPUSD3-213ENST00000472381 SHROOM2Q13796 1616 aa35.29■■■■□ 3.24
RPUSD3-213ENST00000472381 PRG4Q92954 1404 aaPredicted RBP35.1■■■■□ 3.21
RPUSD3-213ENST00000472381 KIF27Q86VH2 1401 aa35.09■■■■□ 3.21
RPUSD3-213ENST00000472381 RUSC2Q8N2Y8 1516 aa35.09■■■■□ 3.21
RPUSD3-213ENST00000472381 JPH4Q96JJ6 628 aa35.07■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms