RNA–Protein interactions for RNA: ENST00000472312.1

ZC3H12A-203, Transcript of zinc finger CCCH-type containing 12A, humanhuman

TSL 2

Gene ZC3H12A, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12A-203ENST00000472312 NISCHQ9Y2I1 1504 aa42.01■■■■■ 4.32
ZC3H12A-203ENST00000472312 CCDC180Q9P1Z9 1646 aa37.51■■■■□ 3.6
ZC3H12A-203ENST00000472312 ABCC9O60706 1549 aa36.56■■■■□ 3.44
ZC3H12A-203ENST00000472312 RB1CC1Q8TDY2 1594 aa35.29■■■■□ 3.24
ZC3H12A-203ENST00000472312 NACADO15069 1562 aa35.25■■■■□ 3.23
ZC3H12A-203ENST00000472312 MYO15BQ96JP2 1530 aa35.11■■■■□ 3.21
ZC3H12A-203ENST00000472312 ZCCHC6Q5VYS8 1495 aaKnown RBP35.02■■■■□ 3.2
ZC3H12A-203ENST00000472312 DCAF1Q9Y4B6 1507 aa34.88■■■■□ 3.17
ZC3H12A-203ENST00000472312 DCAF8L2P0C7V8 631 aa34.84■■■■□ 3.17
ZC3H12A-203ENST00000472312 UNC13AQ9UPW8 1703 aa34.44■■■■□ 3.1
ZC3H12A-203ENST00000472312 BICRAQ9NZM4 1560 aa34.18■■■■□ 3.06
ZC3H12A-203ENST00000472312 PABPN1Q86U42 306 aaKnown RBP eCLIP34.04■■■■□ 3.04
ZC3H12A-203ENST00000472312 SCRIBQ14160 1630 aa34.04■■■■□ 3.04
ZC3H12A-203ENST00000472312 SHROOM4Q9ULL8 1493 aa34.01■■■■□ 3.04
ZC3H12A-203ENST00000472312 DNAJC5BQ9UF47 199 aa33.56■■■□□ 2.96
ZC3H12A-203ENST00000472312 EIF4G1Q04637 1599 aaKnown RBP33.29■■■□□ 2.92
ZC3H12A-203ENST00000472312 CC2D2AQ9P2K1 1620 aa33.15■■■□□ 2.9
ZC3H12A-203ENST00000472312 CECR2Q9BXF3 1484 aa32.93■■■□□ 2.86
ZC3H12A-203ENST00000472312 SMARCA4P51532 1647 aa32.62■■■□□ 2.81
ZC3H12A-203ENST00000472312 BAZ1AQ9NRL2 1556 aaPredicted RBP32.61■■■□□ 2.81
ZC3H12A-203ENST00000472312 NCAPD3P42695 1498 aa32.49■■■□□ 2.79
ZC3H12A-203ENST00000472312 SMARCA2P51531 1590 aa32.48■■■□□ 2.79
ZC3H12A-203ENST00000472312 ATAD2BQ9ULI0 1458 aa32.45■■■□□ 2.79
ZC3H12A-203ENST00000472312 PEG3Q9GZU2 1588 aa32.4■■■□□ 2.78
ZC3H12A-203ENST00000472312 HMGXB3Q12766 1538 aa32.38■■■□□ 2.77
ZC3H12A-203ENST00000472312 MROH2BQ7Z745 1585 aa32.32■■■□□ 2.76
ZC3H12A-203ENST00000472312 BAZ1BQ9UIG0 1483 aaKnown RBP32.17■■■□□ 2.74
ZC3H12A-203ENST00000472312 WIZO95785 1651 aa31.95■■■□□ 2.7
ZC3H12A-203ENST00000472312 RSF1Q96T23 1441 aaPredicted RBP31.92■■■□□ 2.7
ZC3H12A-203ENST00000472312 TOP2AP11388 1531 aaKnown RBP31.7■■■□□ 2.67
ZC3H12A-203ENST00000472312 LAMC3Q9Y6N6 1575 aa31.68■■■□□ 2.66
ZC3H12A-203ENST00000472312 NESP48681 1621 aa31.6■■■□□ 2.65
ZC3H12A-203ENST00000472312 ERCC6Q03468 1493 aa31.57■■■□□ 2.64
ZC3H12A-203ENST00000472312 CADPSQ9ULU8 1353 aa31.49■■■□□ 2.63
ZC3H12A-203ENST00000472312 PDS5BQ9NTI5 1447 aa31.42■■■□□ 2.62
ZC3H12A-203ENST00000472312 CUX2O14529 1486 aa31.39■■■□□ 2.62
ZC3H12A-203ENST00000472312 CFTRP13569 1480 aa31.33■■■□□ 2.61
ZC3H12A-203ENST00000472312 KIF21AQ7Z4S6 1674 aa31.3■■■□□ 2.6
ZC3H12A-203ENST00000472312 THOC2Q8NI27 1593 aaKnown RBP31.29■■■□□ 2.6
ZC3H12A-203ENST00000472312 CCDC88BA6NC98 1476 aa31.24■■■□□ 2.59
ZC3H12A-203ENST00000472312 PRDM2Q13029 1718 aa31.15■■■□□ 2.58
ZC3H12A-203ENST00000472312 FANCD2Q9BXW9 1451 aa31.13■■■□□ 2.57
ZC3H12A-203ENST00000472312 CEP164Q9UPV0 1460 aa31.13■■■□□ 2.57
ZC3H12A-203ENST00000472312 MRC2Q9UBG0 1479 aa31.1■■■□□ 2.57
ZC3H12A-203ENST00000472312 WDR62O43379 1518 aa31.04■■■□□ 2.56
ZC3H12A-203ENST00000472312 SUPT5HO00267 1087 aaKnown RBP30.84■■■□□ 2.53
ZC3H12A-203ENST00000472312 URB2Q14146 1524 aaKnown RBP30.81■■■□□ 2.52
ZC3H12A-203ENST00000472312 ABCC8Q09428 1581 aa30.7■■■□□ 2.5
ZC3H12A-203ENST00000472312 TOPBP1Q92547 1522 aa30.63■■■□□ 2.49
ZC3H12A-203ENST00000472312 DNMBPQ6XZF7 1577 aa30.62■■■□□ 2.49
ZC3H12A-203ENST00000472312 IFT140Q96RY7 1462 aa30.5■■■□□ 2.47
ZC3H12A-203ENST00000472312 DNAJC5Q9H3Z4 198 aa30.4■■■□□ 2.46
ZC3H12A-203ENST00000472312 POLA1P09884 1462 aaPredicted RBP30.36■■■□□ 2.45
ZC3H12A-203ENST00000472312 CUX1P39880 1505 aa30.34■■■□□ 2.45
ZC3H12A-203ENST00000472312 TARBP1Q13395 1621 aaKnown RBP30.33■■■□□ 2.45
ZC3H12A-203ENST00000472312 ZNF608Q9ULD9 1512 aaPredicted RBP30.27■■■□□ 2.44
ZC3H12A-203ENST00000472312 FGD5Q6ZNL6 1462 aa30.25■■■□□ 2.43
ZC3H12A-203ENST00000472312 EIF4G3O43432 1585 aaKnown RBP30.23■■■□□ 2.43
ZC3H12A-203ENST00000472312 WDR97A6NE52 1622 aa30.22■■■□□ 2.43
ZC3H12A-203ENST00000472312 SOGA1O94964 1423 aa30.19■■■□□ 2.42
ZC3H12A-203ENST00000472312 RAD54L2Q9Y4B4 1467 aa30.13■■■□□ 2.41
ZC3H12A-203ENST00000472312 BIVM-ERCC5R4GMW8 1640 aa30.13■■■□□ 2.41
ZC3H12A-203ENST00000472312 WRNQ14191 1432 aaPredicted RBP eCLIP30.12■■■□□ 2.41
ZC3H12A-203ENST00000472312 TOP2BQ02880 1626 aa30.11■■■□□ 2.41
ZC3H12A-203ENST00000472312 AQRO60306 1485 aaKnown RBP eCLIP30.06■■■□□ 2.43e-12■■■■■ 61.6
ZC3H12A-203ENST00000472312 SYNJ1O43426 1573 aa30.03■■■□□ 2.4
ZC3H12A-203ENST00000472312 ABCA10Q8WWZ4 1543 aa30.02■■■□□ 2.4
ZC3H12A-203ENST00000472312 TDRD9Q8NDG6 1382 aaKnown RBP29.97■■■□□ 2.39
ZC3H12A-203ENST00000472312 OSCARQ8IYS5 282 aa29.93■■■□□ 2.38
ZC3H12A-203ENST00000472312 ABCA5Q8WWZ7 1642 aa29.93■■■□□ 2.38
ZC3H12A-203ENST00000472312 GRIN2BQ13224 1484 aa29.92■■■□□ 2.38
ZC3H12A-203ENST00000472312 MAGI1Q96QZ7 1491 aaPredicted RBP29.89■■■□□ 2.38
ZC3H12A-203ENST00000472312 GAPVD1Q14C86 1478 aa29.87■■■□□ 2.37
ZC3H12A-203ENST00000472312 SNAPC4Q5SXM2 1469 aa29.85■■■□□ 2.37
ZC3H12A-203ENST00000472312 PBRM1Q86U86 1689 aa29.85■■■□□ 2.37
ZC3H12A-203ENST00000472312 CHD1O14646 1710 aa29.83■■■□□ 2.37
ZC3H12A-203ENST00000472312 SYNJ2O15056 1496 aa29.74■■■□□ 2.35
ZC3H12A-203ENST00000472312 ERICH3Q5RHP9 1530 aa29.68■■■□□ 2.34
ZC3H12A-203ENST00000472312 ADAMTS12P58397 1594 aa29.63■■■□□ 2.33
ZC3H12A-203ENST00000472312 FBLN2P98095 1184 aa29.62■■■□□ 2.33
ZC3H12A-203ENST00000472312 CHMP7Q8WUX9 453 aaPredicted RBP29.61■■■□□ 2.33
ZC3H12A-203ENST00000472312 CLASP1Q7Z460 1538 aa29.57■■■□□ 2.32
ZC3H12A-203ENST00000472312 FHAD1B1AJZ9 1412 aa29.55■■■□□ 2.32
ZC3H12A-203ENST00000472312 GRIN2AQ12879 1464 aa29.53■■■□□ 2.32
ZC3H12A-203ENST00000472312 RIMBP3CA6NJZ7 1639 aa29.52■■■□□ 2.32
ZC3H12A-203ENST00000472312 RIMBP3BA6NNM3 1639 aa29.52■■■□□ 2.32
ZC3H12A-203ENST00000472312 RIMBP3Q9UFD9 1639 aa29.52■■■□□ 2.32
ZC3H12A-203ENST00000472312 ARHGEF11O15085 1522 aa29.51■■■□□ 2.32
ZC3H12A-203ENST00000472312 KIF27Q86VH2 1401 aa29.51■■■□□ 2.31
ZC3H12A-203ENST00000472312 NUP160Q12769 1436 aa29.43■■■□□ 2.3
ZC3H12A-203ENST00000472312 CUL7Q14999 1698 aa29.4■■■□□ 2.3
ZC3H12A-203ENST00000472312 CEP170Q5SW79 1584 aa29.36■■■□□ 2.29
ZC3H12A-203ENST00000472312 IGF1RP08069 1367 aa29.35■■■□□ 2.29
ZC3H12A-203ENST00000472312 ARAP1Q96P48 1450 aa29.26■■■□□ 2.27
ZC3H12A-203ENST00000472312 SHROOM2Q13796 1616 aa29.24■■■□□ 2.27
ZC3H12A-203ENST00000472312 TRIM41Q8WV44 630 aa29.22■■■□□ 2.27
ZC3H12A-203ENST00000472312 RUSC2Q8N2Y8 1516 aa29.2■■■□□ 2.27
ZC3H12A-203ENST00000472312 CARMIL1Q5VZK9 1371 aa29.18■■■□□ 2.26
ZC3H12A-203ENST00000472312 KIAA0586Q9BVV6 1533 aa29.1■■■□□ 2.25
ZC3H12A-203ENST00000472312 CYB5RLQ6IPT4 315 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms