RNA–Protein interactions for RNA: ENST00000472264.1

MMP23B-204, Transcript of matrix metallopeptidase 23B, humanhuman

TSL 3

Gene MMP23B, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP23B-204ENST00000472264 NISCHQ9Y2I1 1504 aa47.56■■■■■ 5.2
MMP23B-204ENST00000472264 CCDC180Q9P1Z9 1646 aa42.29■■■■■ 4.36
MMP23B-204ENST00000472264 ABCC9O60706 1549 aa41.55■■■■■ 4.24
MMP23B-204ENST00000472264 DCAF8L2P0C7V8 631 aa39.9■■■■□ 3.98
MMP23B-204ENST00000472264 RB1CC1Q8TDY2 1594 aa39.89■■■■□ 3.98
MMP23B-204ENST00000472264 NACADO15069 1562 aa39.81■■■■□ 3.96
MMP23B-204ENST00000472264 ZCCHC6Q5VYS8 1495 aaKnown RBP39.56■■■■□ 3.92
MMP23B-204ENST00000472264 MYO15BQ96JP2 1530 aa39.5■■■■□ 3.91
MMP23B-204ENST00000472264 DCAF1Q9Y4B6 1507 aa39.31■■■■□ 3.88
MMP23B-204ENST00000472264 UNC13AQ9UPW8 1703 aa39■■■■□ 3.83
MMP23B-204ENST00000472264 PABPN1Q86U42 306 aaKnown RBP eCLIP38.85■■■■□ 3.81
MMP23B-204ENST00000472264 BICRAQ9NZM4 1560 aa38.69■■■■□ 3.78
MMP23B-204ENST00000472264 SCRIBQ14160 1630 aa38.62■■■■□ 3.77
MMP23B-204ENST00000472264 DNAJC5BQ9UF47 199 aa38.28■■■■□ 3.72
MMP23B-204ENST00000472264 SHROOM4Q9ULL8 1493 aa38.21■■■■□ 3.71
MMP23B-204ENST00000472264 EIF4G1Q04637 1599 aaKnown RBP37.68■■■■□ 3.62
MMP23B-204ENST00000472264 CC2D2AQ9P2K1 1620 aa37.57■■■■□ 3.6
MMP23B-204ENST00000472264 CECR2Q9BXF3 1484 aa37.33■■■■□ 3.57
MMP23B-204ENST00000472264 SMARCA4P51532 1647 aa36.92■■■■□ 3.5
MMP23B-204ENST00000472264 BAZ1AQ9NRL2 1556 aaPredicted RBP36.86■■■■□ 3.49
MMP23B-204ENST00000472264 NCAPD3P42695 1498 aa36.75■■■■□ 3.47
MMP23B-204ENST00000472264 ATAD2BQ9ULI0 1458 aa36.75■■■■□ 3.47
MMP23B-204ENST00000472264 SMARCA2P51531 1590 aa36.69■■■■□ 3.46
MMP23B-204ENST00000472264 MROH2BQ7Z745 1585 aa36.66■■■■□ 3.46
MMP23B-204ENST00000472264 PEG3Q9GZU2 1588 aa36.53■■■■□ 3.44
MMP23B-204ENST00000472264 HMGXB3Q12766 1538 aa36.53■■■■□ 3.44
MMP23B-204ENST00000472264 BAZ1BQ9UIG0 1483 aaKnown RBP36.45■■■■□ 3.43
MMP23B-204ENST00000472264 WIZO95785 1651 aa36.27■■■■□ 3.4
MMP23B-204ENST00000472264 RSF1Q96T23 1441 aaPredicted RBP36.2■■■■□ 3.39
MMP23B-204ENST00000472264 NESP48681 1621 aa35.92■■■■□ 3.34
MMP23B-204ENST00000472264 TOP2AP11388 1531 aaKnown RBP35.84■■■■□ 3.33
MMP23B-204ENST00000472264 ERCC6Q03468 1493 aa35.81■■■■□ 3.32
MMP23B-204ENST00000472264 LAMC3Q9Y6N6 1575 aa35.79■■■■□ 3.32
MMP23B-204ENST00000472264 CADPSQ9ULU8 1353 aa35.68■■■■□ 3.3
MMP23B-204ENST00000472264 PDS5BQ9NTI5 1447 aa35.57■■■■□ 3.29
MMP23B-204ENST00000472264 KIF21AQ7Z4S6 1674 aa35.48■■■■□ 3.27
MMP23B-204ENST00000472264 CCDC88BA6NC98 1476 aa35.47■■■■□ 3.27
MMP23B-204ENST00000472264 CUX2O14529 1486 aa35.44■■■■□ 3.26
MMP23B-204ENST00000472264 CFTRP13569 1480 aa35.43■■■■□ 3.26
MMP23B-204ENST00000472264 DNAJC5Q9H3Z4 198 aa35.39■■■■□ 3.26
MMP23B-204ENST00000472264 THOC2Q8NI27 1593 aaKnown RBP35.35■■■■□ 3.25
MMP23B-204ENST00000472264 SUPT5HO00267 1087 aaKnown RBP35.28■■■■□ 3.24
MMP23B-204ENST00000472264 FANCD2Q9BXW9 1451 aa35.27■■■■□ 3.24
MMP23B-204ENST00000472264 CEP164Q9UPV0 1460 aa35.22■■■■□ 3.23
MMP23B-204ENST00000472264 MRC2Q9UBG0 1479 aa35.2■■■■□ 3.23
MMP23B-204ENST00000472264 PRDM2Q13029 1718 aa35.14■■■■□ 3.22
MMP23B-204ENST00000472264 WDR62O43379 1518 aa35.06■■■■□ 3.2
MMP23B-204ENST00000472264 URB2Q14146 1524 aaKnown RBP34.92■■■■□ 3.18
MMP23B-204ENST00000472264 TOPBP1Q92547 1522 aa34.69■■■■□ 3.14
MMP23B-204ENST00000472264 ABCC8Q09428 1581 aa34.69■■■■□ 3.14
MMP23B-204ENST00000472264 DNMBPQ6XZF7 1577 aa34.62■■■■□ 3.13
MMP23B-204ENST00000472264 IFT140Q96RY7 1462 aa34.49■■■■□ 3.11
MMP23B-204ENST00000472264 CUX1P39880 1505 aa34.39■■■■□ 3.1
MMP23B-204ENST00000472264 POLA1P09884 1462 aaPredicted RBP34.38■■■■□ 3.09
MMP23B-204ENST00000472264 ZNF608Q9ULD9 1512 aaPredicted RBP34.36■■■■□ 3.09
MMP23B-204ENST00000472264 TARBP1Q13395 1621 aaKnown RBP34.32■■■■□ 3.08
MMP23B-204ENST00000472264 FGD5Q6ZNL6 1462 aa34.29■■■■□ 3.08
MMP23B-204ENST00000472264 SOGA1O94964 1423 aa34.28■■■■□ 3.08
MMP23B-204ENST00000472264 RAD54L2Q9Y4B4 1467 aa34.27■■■■□ 3.08
MMP23B-204ENST00000472264 EIF4G3O43432 1585 aaKnown RBP34.19■■■■□ 3.06
MMP23B-204ENST00000472264 AQRO60306 1485 aaKnown RBP eCLIP34.18■■■■□ 3.06
MMP23B-204ENST00000472264 WRNQ14191 1432 aaPredicted RBP eCLIP34.13■■■■□ 3.05
MMP23B-204ENST00000472264 TDRD9Q8NDG6 1382 aaKnown RBP34.11■■■■□ 3.05
MMP23B-204ENST00000472264 TOP2BQ02880 1626 aa34.06■■■■□ 3.04
MMP23B-204ENST00000472264 BIVM-ERCC5R4GMW8 1640 aa34.05■■■■□ 3.04
MMP23B-204ENST00000472264 SYNJ1O43426 1573 aa34.05■■■■□ 3.04
MMP23B-204ENST00000472264 OSCARQ8IYS5 282 aa34.03■■■■□ 3.04
MMP23B-204ENST00000472264 WDR97A6NE52 1622 aa34■■■■□ 3.03
MMP23B-204ENST00000472264 ABCA10Q8WWZ4 1543 aa33.94■■■■□ 3.02
MMP23B-204ENST00000472264 GRIN2BQ13224 1484 aa33.86■■■■□ 3.01
MMP23B-204ENST00000472264 GAPVD1Q14C86 1478 aa33.86■■■■□ 3.01
MMP23B-204ENST00000472264 FBLN2P98095 1184 aa33.84■■■■□ 3.01
MMP23B-204ENST00000472264 SNAPC4Q5SXM2 1469 aa33.82■■■■□ 3.01
MMP23B-204ENST00000472264 CHD1O14646 1710 aa33.81■■■■□ 3
MMP23B-204ENST00000472264 ABCA5Q8WWZ7 1642 aa33.8■■■■□ 3
MMP23B-204ENST00000472264 PBRM1Q86U86 1689 aa33.78■■■■□ 3
MMP23B-204ENST00000472264 MAGI1Q96QZ7 1491 aaPredicted RBP33.76■■■■□ 3
MMP23B-204ENST00000472264 CHMP7Q8WUX9 453 aaPredicted RBP33.71■■■□□ 2.99
MMP23B-204ENST00000472264 SYNJ2O15056 1496 aa33.65■■■□□ 2.98
MMP23B-204ENST00000472264 ERICH3Q5RHP9 1530 aa33.53■■■□□ 2.96
MMP23B-204ENST00000472264 ADAMTS12P58397 1594 aa33.48■■■□□ 2.95
MMP23B-204ENST00000472264 TRIM41Q8WV44 630 aa33.47■■■□□ 2.95
MMP23B-204ENST00000472264 FHAD1B1AJZ9 1412 aa33.45■■■□□ 2.95
MMP23B-204ENST00000472264 RIMBP3CA6NJZ7 1639 aa33.45■■■□□ 2.95
MMP23B-204ENST00000472264 RIMBP3BA6NNM3 1639 aa33.45■■■□□ 2.95
MMP23B-204ENST00000472264 RIMBP3Q9UFD9 1639 aa33.45■■■□□ 2.95
MMP23B-204ENST00000472264 KIF27Q86VH2 1401 aa33.44■■■□□ 2.94
MMP23B-204ENST00000472264 GRIN2AQ12879 1464 aa33.42■■■□□ 2.94
MMP23B-204ENST00000472264 ARHGEF11O15085 1522 aa33.42■■■□□ 2.94
MMP23B-204ENST00000472264 CLASP1Q7Z460 1538 aa33.42■■■□□ 2.94
MMP23B-204ENST00000472264 IGF1RP08069 1367 aa33.34■■■□□ 2.93
MMP23B-204ENST00000472264 NUP160Q12769 1436 aa33.27■■■□□ 2.92
MMP23B-204ENST00000472264 CEP170Q5SW79 1584 aa33.26■■■□□ 2.92
MMP23B-204ENST00000472264 CUL7Q14999 1698 aa33.2■■■□□ 2.91
MMP23B-204ENST00000472264 CYB5RLQ6IPT4 315 aa33.19■■■□□ 2.9
MMP23B-204ENST00000472264 ARAP1Q96P48 1450 aa33.14■■■□□ 2.9
MMP23B-204ENST00000472264 RUSC2Q8N2Y8 1516 aa33.13■■■□□ 2.89
MMP23B-204ENST00000472264 CARMIL1Q5VZK9 1371 aa33.13■■■□□ 2.89
MMP23B-204ENST00000472264 SHROOM2Q13796 1616 aa33.02■■■□□ 2.88
MMP23B-204ENST00000472264 JPH4Q96JJ6 628 aa33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms