RNA–Protein interactions for RNA: ENST00000472221.5

SEC61A2-212, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 2

Gene SEC61A2, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-212ENST00000472221 NISCHQ9Y2I1 1504 aa42.03■■■■■ 4.32
SEC61A2-212ENST00000472221 ABCC9O60706 1549 aa37.71■■■■□ 3.63
SEC61A2-212ENST00000472221 CCDC180Q9P1Z9 1646 aa37.7■■■■□ 3.63
SEC61A2-212ENST00000472221 RB1CC1Q8TDY2 1594 aa35.89■■■■□ 3.34
SEC61A2-212ENST00000472221 NACADO15069 1562 aa35.65■■■■□ 3.3
SEC61A2-212ENST00000472221 DCAF8L2P0C7V8 631 aa35.42■■■■□ 3.26
SEC61A2-212ENST00000472221 DNAJC5BQ9UF47 199 aa35.41■■■■□ 3.26
SEC61A2-212ENST00000472221 MYO15BQ96JP2 1530 aa35.18■■■■□ 3.22
SEC61A2-212ENST00000472221 PABPN1Q86U42 306 aaKnown RBP eCLIP35.1■■■■□ 3.21
SEC61A2-212ENST00000472221 UNC13AQ9UPW8 1703 aa35.08■■■■□ 3.21
SEC61A2-212ENST00000472221 BICRAQ9NZM4 1560 aa34.87■■■■□ 3.17
SEC61A2-212ENST00000472221 ZCCHC6Q5VYS8 1495 aaKnown RBP34.84■■■■□ 3.17
SEC61A2-212ENST00000472221 DCAF1Q9Y4B6 1507 aa34.73■■■■□ 3.15
SEC61A2-212ENST00000472221 SHROOM4Q9ULL8 1493 aa34.39■■■■□ 3.1
SEC61A2-212ENST00000472221 SCRIBQ14160 1630 aa34.34■■■■□ 3.09
SEC61A2-212ENST00000472221 CC2D2AQ9P2K1 1620 aa34.07■■■■□ 3.04
SEC61A2-212ENST00000472221 EIF4G1Q04637 1599 aaKnown RBP34■■■■□ 3.03
SEC61A2-212ENST00000472221 CECR2Q9BXF3 1484 aa33.97■■■■□ 3.03
SEC61A2-212ENST00000472221 NCAPD3P42695 1498 aa32.93■■■□□ 2.86
SEC61A2-212ENST00000472221 ATAD2BQ9ULI0 1458 aa32.82■■■□□ 2.84
SEC61A2-212ENST00000472221 SMARCA4P51532 1647 aa32.77■■■□□ 2.84
SEC61A2-212ENST00000472221 SMARCA2P51531 1590 aa32.71■■■□□ 2.83
SEC61A2-212ENST00000472221 HMGXB3Q12766 1538 aa32.67■■■□□ 2.82
SEC61A2-212ENST00000472221 BAZ1AQ9NRL2 1556 aaPredicted RBP32.61■■■□□ 2.81
SEC61A2-212ENST00000472221 ERCC6Q03468 1493 aa32.54■■■□□ 2.8
SEC61A2-212ENST00000472221 CUX2O14529 1486 aa32.51■■■□□ 2.79
SEC61A2-212ENST00000472221 DNAJC5Q9H3Z4 198 aa32.51■■■□□ 2.79
SEC61A2-212ENST00000472221 PEG3Q9GZU2 1588 aa32.49■■■□□ 2.79
SEC61A2-212ENST00000472221 BAZ1BQ9UIG0 1483 aaKnown RBP32.48■■■□□ 2.79
SEC61A2-212ENST00000472221 NESP48681 1621 aa32.4■■■□□ 2.78
SEC61A2-212ENST00000472221 MROH2BQ7Z745 1585 aa32.38■■■□□ 2.77
SEC61A2-212ENST00000472221 LAMC3Q9Y6N6 1575 aa32.17■■■□□ 2.74
SEC61A2-212ENST00000472221 THOC2Q8NI27 1593 aaKnown RBP32.08■■■□□ 2.73
SEC61A2-212ENST00000472221 WIZO95785 1651 aa31.99■■■□□ 2.71
SEC61A2-212ENST00000472221 PDS5BQ9NTI5 1447 aa31.98■■■□□ 2.71
SEC61A2-212ENST00000472221 KIF21AQ7Z4S6 1674 aa31.97■■■□□ 2.71
SEC61A2-212ENST00000472221 CADPSQ9ULU8 1353 aa31.92■■■□□ 2.7
SEC61A2-212ENST00000472221 RSF1Q96T23 1441 aaPredicted RBP31.72■■■□□ 2.67
SEC61A2-212ENST00000472221 MRC2Q9UBG0 1479 aa31.71■■■□□ 2.67
SEC61A2-212ENST00000472221 WDR62O43379 1518 aa31.65■■■□□ 2.66
SEC61A2-212ENST00000472221 TOP2AP11388 1531 aaKnown RBP31.59■■■□□ 2.65
SEC61A2-212ENST00000472221 CEP164Q9UPV0 1460 aa31.58■■■□□ 2.65
SEC61A2-212ENST00000472221 CFTRP13569 1480 aa31.57■■■□□ 2.64
SEC61A2-212ENST00000472221 FANCD2Q9BXW9 1451 aa31.55■■■□□ 2.64
SEC61A2-212ENST00000472221 URB2Q14146 1524 aaKnown RBP31.3■■■□□ 2.6
SEC61A2-212ENST00000472221 CCDC88BA6NC98 1476 aa31.23■■■□□ 2.59
SEC61A2-212ENST00000472221 PRDM2Q13029 1718 aa31.21■■■□□ 2.59
SEC61A2-212ENST00000472221 TRIM41Q8WV44 630 aa31.04■■■□□ 2.56
SEC61A2-212ENST00000472221 OSCARQ8IYS5 282 aa31.01■■■□□ 2.55
SEC61A2-212ENST00000472221 TOPBP1Q92547 1522 aa30.96■■■□□ 2.55
SEC61A2-212ENST00000472221 IFT140Q96RY7 1462 aa30.95■■■□□ 2.55
SEC61A2-212ENST00000472221 ZNF608Q9ULD9 1512 aaPredicted RBP30.92■■■□□ 2.54
SEC61A2-212ENST00000472221 ABCC8Q09428 1581 aa30.88■■■□□ 2.53
SEC61A2-212ENST00000472221 DNMBPQ6XZF7 1577 aa30.83■■■□□ 2.53
SEC61A2-212ENST00000472221 EIF4G3O43432 1585 aaKnown RBP30.73■■■□□ 2.51
SEC61A2-212ENST00000472221 TARBP1Q13395 1621 aaKnown RBP30.69■■■□□ 2.5
SEC61A2-212ENST00000472221 POLA1P09884 1462 aaPredicted RBP30.64■■■□□ 2.5
SEC61A2-212ENST00000472221 AQRO60306 1485 aaKnown RBP eCLIP30.63■■■□□ 2.49
SEC61A2-212ENST00000472221 RIMBP3CA6NJZ7 1639 aa30.62■■■□□ 2.49
SEC61A2-212ENST00000472221 RIMBP3BA6NNM3 1639 aa30.62■■■□□ 2.49
SEC61A2-212ENST00000472221 RIMBP3Q9UFD9 1639 aa30.62■■■□□ 2.49
SEC61A2-212ENST00000472221 RAD54L2Q9Y4B4 1467 aa30.53■■■□□ 2.48
SEC61A2-212ENST00000472221 ARHGEF11O15085 1522 aa30.52■■■□□ 2.48
SEC61A2-212ENST00000472221 SOGA1O94964 1423 aa30.49■■■□□ 2.47
SEC61A2-212ENST00000472221 CHD1O14646 1710 aa30.49■■■□□ 2.47
SEC61A2-212ENST00000472221 FGD5Q6ZNL6 1462 aa30.44■■■□□ 2.46
SEC61A2-212ENST00000472221 TDRD9Q8NDG6 1382 aaKnown RBP30.43■■■□□ 2.46
SEC61A2-212ENST00000472221 CUX1P39880 1505 aa30.42■■■□□ 2.46
SEC61A2-212ENST00000472221 FBLN2P98095 1184 aa30.39■■■□□ 2.46
SEC61A2-212ENST00000472221 WDR97A6NE52 1622 aa30.37■■■□□ 2.45
SEC61A2-212ENST00000472221 SNAPC4Q5SXM2 1469 aa30.31■■■□□ 2.44
SEC61A2-212ENST00000472221 CYB5RLQ6IPT4 315 aa30.28■■■□□ 2.44
SEC61A2-212ENST00000472221 SUPT5HO00267 1087 aaKnown RBP30.26■■■□□ 2.43
SEC61A2-212ENST00000472221 ARAP1Q96P48 1450 aa30.24■■■□□ 2.43
SEC61A2-212ENST00000472221 GRIN2BQ13224 1484 aa30.23■■■□□ 2.43
SEC61A2-212ENST00000472221 MAGI1Q96QZ7 1491 aaPredicted RBP30.23■■■□□ 2.43
SEC61A2-212ENST00000472221 CHMP7Q8WUX9 453 aaPredicted RBP30.18■■■□□ 2.42
SEC61A2-212ENST00000472221 CLASP1Q7Z460 1538 aa30.17■■■□□ 2.42
SEC61A2-212ENST00000472221 SYNJ2O15056 1496 aa30.14■■■□□ 2.42
SEC61A2-212ENST00000472221 SYNJ1O43426 1573 aa30.13■■■□□ 2.41
SEC61A2-212ENST00000472221 GAPVD1Q14C86 1478 aa30.12■■■□□ 2.41
SEC61A2-212ENST00000472221 ABCA10Q8WWZ4 1543 aa30.11■■■□□ 2.41
SEC61A2-212ENST00000472221 PBRM1Q86U86 1689 aa30.1■■■□□ 2.41
SEC61A2-212ENST00000472221 ABCA5Q8WWZ7 1642 aa30.06■■■□□ 2.4
SEC61A2-212ENST00000472221 WRNQ14191 1432 aaPredicted RBP eCLIP29.96■■■□□ 2.39
SEC61A2-212ENST00000472221 TOP2BQ02880 1626 aa29.93■■■□□ 2.38
SEC61A2-212ENST00000472221 BIVM-ERCC5R4GMW8 1640 aa29.93■■■□□ 2.38
SEC61A2-212ENST00000472221 TRHP20396 242 aaPredicted RBP29.93■■■□□ 2.38
SEC61A2-212ENST00000472221 GRIN2AQ12879 1464 aa29.85■■■□□ 2.37
SEC61A2-212ENST00000472221 ADAMTS12P58397 1594 aa29.83■■■□□ 2.37
SEC61A2-212ENST00000472221 NUP160Q12769 1436 aa29.76■■■□□ 2.35
SEC61A2-212ENST00000472221 CEP170Q5SW79 1584 aa29.74■■■□□ 2.35
SEC61A2-212ENST00000472221 FHAD1B1AJZ9 1412 aa29.74■■■□□ 2.35
SEC61A2-212ENST00000472221 ERICH3Q5RHP9 1530 aa29.72■■■□□ 2.35
SEC61A2-212ENST00000472221 ERCC6L2Q5T890 1561 aa29.7■■■□□ 2.35
SEC61A2-212ENST00000472221 SHROOM2Q13796 1616 aa29.63■■■□□ 2.33
SEC61A2-212ENST00000472221 PRG4Q92954 1404 aaPredicted RBP29.45■■■□□ 2.31
SEC61A2-212ENST00000472221 JPH4Q96JJ6 628 aa29.44■■■□□ 2.3
SEC61A2-212ENST00000472221 RUSC2Q8N2Y8 1516 aa29.41■■■□□ 2.3
SEC61A2-212ENST00000472221 IGF1RP08069 1367 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms