RNA–Protein interactions for RNA: ENST00000472191.1

PCBP3-211, Transcript of poly(rC) binding protein 3, humanhuman

TSL 5

Gene PCBP3, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP3-211ENST00000472191 NISCHQ9Y2I1 1504 aa34.82■■■■□ 3.16
PCBP3-211ENST00000472191 CCDC180Q9P1Z9 1646 aa31.02■■■□□ 2.56
PCBP3-211ENST00000472191 ABCC9O60706 1549 aa30.38■■■□□ 2.45
PCBP3-211ENST00000472191 RB1CC1Q8TDY2 1594 aa29.17■■■□□ 2.26
PCBP3-211ENST00000472191 NACADO15069 1562 aa29.1■■■□□ 2.25
PCBP3-211ENST00000472191 DCAF8L2P0C7V8 631 aa29.09■■■□□ 2.25
PCBP3-211ENST00000472191 ZCCHC6Q5VYS8 1495 aaKnown RBP29.02■■■□□ 2.24
PCBP3-211ENST00000472191 MYO15BQ96JP2 1530 aa28.87■■■□□ 2.21
PCBP3-211ENST00000472191 DCAF1Q9Y4B6 1507 aa28.76■■■□□ 2.19
PCBP3-211ENST00000472191 UNC13AQ9UPW8 1703 aa28.65■■■□□ 2.18
PCBP3-211ENST00000472191 SCRIBQ14160 1630 aa28.36■■■□□ 2.13
PCBP3-211ENST00000472191 PABPN1Q86U42 306 aaKnown RBP eCLIP28.34■■■□□ 2.13
PCBP3-211ENST00000472191 BICRAQ9NZM4 1560 aa28.33■■■□□ 2.13
PCBP3-211ENST00000472191 SHROOM4Q9ULL8 1493 aa27.92■■■□□ 2.06
PCBP3-211ENST00000472191 DNAJC5BQ9UF47 199 aa27.85■■■□□ 2.05
PCBP3-211ENST00000472191 EIF4G1Q04637 1599 aaKnown RBP27.57■■■□□ 2
PCBP3-211ENST00000472191 CC2D2AQ9P2K1 1620 aa27.49■■□□□ 1.99
PCBP3-211ENST00000472191 CECR2Q9BXF3 1484 aa27.26■■□□□ 1.95
PCBP3-211ENST00000472191 SMARCA4P51532 1647 aa27.08■■□□□ 1.93
PCBP3-211ENST00000472191 BAZ1AQ9NRL2 1556 aaPredicted RBP26.99■■□□□ 1.91
PCBP3-211ENST00000472191 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
PCBP3-211ENST00000472191 ATAD2BQ9ULI0 1458 aa26.87■■□□□ 1.89
PCBP3-211ENST00000472191 SMARCA2P51531 1590 aa26.84■■□□□ 1.89
PCBP3-211ENST00000472191 NCAPD3P42695 1498 aa26.82■■□□□ 1.88
PCBP3-211ENST00000472191 PEG3Q9GZU2 1588 aa26.75■■□□□ 1.87
PCBP3-211ENST00000472191 HMGXB3Q12766 1538 aa26.75■■□□□ 1.87
PCBP3-211ENST00000472191 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
PCBP3-211ENST00000472191 WIZO95785 1651 aa26.63■■□□□ 1.85
PCBP3-211ENST00000472191 RSF1Q96T23 1441 aaPredicted RBP26.51■■□□□ 1.83
PCBP3-211ENST00000472191 NESP48681 1621 aa26.3■■□□□ 1.8
PCBP3-211ENST00000472191 TOP2AP11388 1531 aaKnown RBP26.29■■□□□ 1.8
PCBP3-211ENST00000472191 LAMC3Q9Y6N6 1575 aa26.16■■□□□ 1.78
PCBP3-211ENST00000472191 ERCC6Q03468 1493 aa26.16■■□□□ 1.78
PCBP3-211ENST00000472191 KIF21AQ7Z4S6 1674 aa26.05■■□□□ 1.76
PCBP3-211ENST00000472191 CADPSQ9ULU8 1353 aa26.04■■□□□ 1.76
PCBP3-211ENST00000472191 CCDC88BA6NC98 1476 aa25.96■■□□□ 1.75
PCBP3-211ENST00000472191 PDS5BQ9NTI5 1447 aa25.94■■□□□ 1.74
PCBP3-211ENST00000472191 THOC2Q8NI27 1593 aaKnown RBP25.92■■□□□ 1.74
PCBP3-211ENST00000472191 CFTRP13569 1480 aa25.9■■□□□ 1.74
PCBP3-211ENST00000472191 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
PCBP3-211ENST00000472191 CUX2O14529 1486 aa25.85■■□□□ 1.73
PCBP3-211ENST00000472191 SUPT5HO00267 1087 aaKnown RBP25.84■■□□□ 1.73
PCBP3-211ENST00000472191 FANCD2Q9BXW9 1451 aa25.79■■□□□ 1.72
PCBP3-211ENST00000472191 CEP164Q9UPV0 1460 aa25.78■■□□□ 1.72
PCBP3-211ENST00000472191 MRC2Q9UBG0 1479 aa25.74■■□□□ 1.71
PCBP3-211ENST00000472191 WDR62O43379 1518 aa25.67■■□□□ 1.7
PCBP3-211ENST00000472191 DNAJC5Q9H3Z4 198 aa25.66■■□□□ 1.7
PCBP3-211ENST00000472191 URB2Q14146 1524 aaKnown RBP25.57■■□□□ 1.68
PCBP3-211ENST00000472191 TOPBP1Q92547 1522 aa25.4■■□□□ 1.66
PCBP3-211ENST00000472191 DNMBPQ6XZF7 1577 aa25.38■■□□□ 1.65
PCBP3-211ENST00000472191 ABCC8Q09428 1581 aa25.3■■□□□ 1.64
PCBP3-211ENST00000472191 CUX1P39880 1505 aa25.22■■□□□ 1.63
PCBP3-211ENST00000472191 IFT140Q96RY7 1462 aa25.2■■□□□ 1.62
PCBP3-211ENST00000472191 POLA1P09884 1462 aaPredicted RBP25.18■■□□□ 1.62
PCBP3-211ENST00000472191 ZNF608Q9ULD9 1512 aaPredicted RBP25.16■■□□□ 1.62
PCBP3-211ENST00000472191 TARBP1Q13395 1621 aaKnown RBP25.15■■□□□ 1.62
PCBP3-211ENST00000472191 FGD5Q6ZNL6 1462 aa25.13■■□□□ 1.61
PCBP3-211ENST00000472191 EIF4G3O43432 1585 aaKnown RBP25.1■■□□□ 1.61
PCBP3-211ENST00000472191 RAD54L2Q9Y4B4 1467 aa25.09■■□□□ 1.61
PCBP3-211ENST00000472191 SYNJ1O43426 1573 aa25.03■■□□□ 1.6
PCBP3-211ENST00000472191 SOGA1O94964 1423 aa25.03■■□□□ 1.6
PCBP3-211ENST00000472191 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
PCBP3-211ENST00000472191 WRNQ14191 1432 aaPredicted RBP eCLIP25■■□□□ 1.59
PCBP3-211ENST00000472191 WDR97A6NE52 1622 aa24.99■■□□□ 1.59
PCBP3-211ENST00000472191 TOP2BQ02880 1626 aa24.98■■□□□ 1.59
PCBP3-211ENST00000472191 AQRO60306 1485 aaKnown RBP eCLIP24.98■■□□□ 1.59
PCBP3-211ENST00000472191 TDRD9Q8NDG6 1382 aaKnown RBP24.92■■□□□ 1.58
PCBP3-211ENST00000472191 ABCA10Q8WWZ4 1543 aa24.84■■□□□ 1.57
PCBP3-211ENST00000472191 PBRM1Q86U86 1689 aa24.83■■□□□ 1.57
PCBP3-211ENST00000472191 CHD1O14646 1710 aa24.83■■□□□ 1.57
PCBP3-211ENST00000472191 ABCA5Q8WWZ7 1642 aa24.82■■□□□ 1.56
PCBP3-211ENST00000472191 SNAPC4Q5SXM2 1469 aa24.77■■□□□ 1.56
PCBP3-211ENST00000472191 GAPVD1Q14C86 1478 aa24.76■■□□□ 1.55
PCBP3-211ENST00000472191 GRIN2BQ13224 1484 aa24.75■■□□□ 1.55
PCBP3-211ENST00000472191 OSCARQ8IYS5 282 aa24.72■■□□□ 1.55
PCBP3-211ENST00000472191 MAGI1Q96QZ7 1491 aaPredicted RBP24.69■■□□□ 1.54
PCBP3-211ENST00000472191 FBLN2P98095 1184 aa24.66■■□□□ 1.54
PCBP3-211ENST00000472191 SYNJ2O15056 1496 aa24.6■■□□□ 1.53
PCBP3-211ENST00000472191 ADAMTS12P58397 1594 aa24.59■■□□□ 1.53
PCBP3-211ENST00000472191 CHMP7Q8WUX9 453 aaPredicted RBP24.55■■□□□ 1.52
PCBP3-211ENST00000472191 ERICH3Q5RHP9 1530 aa24.55■■□□□ 1.52
PCBP3-211ENST00000472191 RIMBP3CA6NJZ7 1639 aa24.47■■□□□ 1.51
PCBP3-211ENST00000472191 RIMBP3BA6NNM3 1639 aa24.47■■□□□ 1.51
PCBP3-211ENST00000472191 RIMBP3Q9UFD9 1639 aa24.47■■□□□ 1.51
PCBP3-211ENST00000472191 CLASP1Q7Z460 1538 aa24.47■■□□□ 1.51
PCBP3-211ENST00000472191 GRIN2AQ12879 1464 aa24.46■■□□□ 1.51
PCBP3-211ENST00000472191 FHAD1B1AJZ9 1412 aa24.45■■□□□ 1.51
PCBP3-211ENST00000472191 KIF27Q86VH2 1401 aa24.45■■□□□ 1.51
PCBP3-211ENST00000472191 ARHGEF11O15085 1522 aa24.42■■□□□ 1.5
PCBP3-211ENST00000472191 CEP170Q5SW79 1584 aa24.39■■□□□ 1.5
PCBP3-211ENST00000472191 CUL7Q14999 1698 aa24.37■■□□□ 1.49
PCBP3-211ENST00000472191 TRIM41Q8WV44 630 aa24.35■■□□□ 1.49
PCBP3-211ENST00000472191 IGF1RP08069 1367 aa24.34■■□□□ 1.49
PCBP3-211ENST00000472191 NUP160Q12769 1436 aa24.33■■□□□ 1.49
PCBP3-211ENST00000472191 RUSC2Q8N2Y8 1516 aa24.31■■□□□ 1.48
PCBP3-211ENST00000472191 ARAP1Q96P48 1450 aa24.24■■□□□ 1.47
PCBP3-211ENST00000472191 CARMIL1Q5VZK9 1371 aa24.21■■□□□ 1.47
PCBP3-211ENST00000472191 SHROOM2Q13796 1616 aa24.21■■□□□ 1.47
PCBP3-211ENST00000472191 ERCC6L2Q5T890 1561 aa24.19■■□□□ 1.46
PCBP3-211ENST00000472191 CYB5RLQ6IPT4 315 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms