RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 NISCHQ9Y2I1 1504 aa20.13■□□□□ 0.81
TSPAN1-205ENST00000472170 CCDC180Q9P1Z9 1646 aa17.95■□□□□ 0.46
TSPAN1-205ENST00000472170 ABCC9O60706 1549 aa17.72■□□□□ 0.43
TSPAN1-205ENST00000472170 DCAF8L2P0C7V8 631 aa17.13■□□□□ 0.33
TSPAN1-205ENST00000472170 RB1CC1Q8TDY2 1594 aa17.03■□□□□ 0.32
TSPAN1-205ENST00000472170 NACADO15069 1562 aa16.97■□□□□ 0.31
TSPAN1-205ENST00000472170 DNAJC5BQ9UF47 199 aa16.8■□□□□ 0.28
TSPAN1-205ENST00000472170 MYO15BQ96JP2 1530 aa16.78■□□□□ 0.28
TSPAN1-205ENST00000472170 ZCCHC6Q5VYS8 1495 aaKnown RBP16.68■□□□□ 0.26
TSPAN1-205ENST00000472170 DCAF1Q9Y4B6 1507 aa16.65■□□□□ 0.26
TSPAN1-205ENST00000472170 PABPN1Q86U42 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
TSPAN1-205ENST00000472170 UNC13AQ9UPW8 1703 aa16.51■□□□□ 0.23
TSPAN1-205ENST00000472170 BICRAQ9NZM4 1560 aa16.36■□□□□ 0.21
TSPAN1-205ENST00000472170 SCRIBQ14160 1630 aa16.36■□□□□ 0.21
TSPAN1-205ENST00000472170 SHROOM4Q9ULL8 1493 aa16.3■□□□□ 0.2
TSPAN1-205ENST00000472170 EIF4G1Q04637 1599 aaKnown RBP16.02■□□□□ 0.16
TSPAN1-205ENST00000472170 CC2D2AQ9P2K1 1620 aa16■□□□□ 0.15
TSPAN1-205ENST00000472170 CECR2Q9BXF3 1484 aa15.97■□□□□ 0.15
TSPAN1-205ENST00000472170 BAZ1AQ9NRL2 1556 aaPredicted RBP15.65■□□□□ 0.1
TSPAN1-205ENST00000472170 NCAPD3P42695 1498 aa15.64■□□□□ 0.09
TSPAN1-205ENST00000472170 SMARCA2P51531 1590 aa15.63■□□□□ 0.09
TSPAN1-205ENST00000472170 DNAJC5Q9H3Z4 198 aa15.63■□□□□ 0.09
TSPAN1-205ENST00000472170 SMARCA4P51532 1647 aa15.63■□□□□ 0.09
TSPAN1-205ENST00000472170 ATAD2BQ9ULI0 1458 aa15.59■□□□□ 0.09
TSPAN1-205ENST00000472170 BAZ1BQ9UIG0 1483 aaKnown RBP15.52■□□□□ 0.07
TSPAN1-205ENST00000472170 HMGXB3Q12766 1538 aa15.51■□□□□ 0.07
TSPAN1-205ENST00000472170 MROH2BQ7Z745 1585 aa15.47■□□□□ 0.07
TSPAN1-205ENST00000472170 PEG3Q9GZU2 1588 aa15.45■□□□□ 0.06
TSPAN1-205ENST00000472170 ERCC6Q03468 1493 aa15.39■□□□□ 0.05
TSPAN1-205ENST00000472170 WIZO95785 1651 aa15.31■□□□□ 0.04
TSPAN1-205ENST00000472170 RSF1Q96T23 1441 aaPredicted RBP15.28■□□□□ 0.04
TSPAN1-205ENST00000472170 LAMC3Q9Y6N6 1575 aa15.26■□□□□ 0.03
TSPAN1-205ENST00000472170 PDS5BQ9NTI5 1447 aa15.24■□□□□ 0.03
TSPAN1-205ENST00000472170 NESP48681 1621 aa15.24■□□□□ 0.03
TSPAN1-205ENST00000472170 CADPSQ9ULU8 1353 aa15.22■□□□□ 0.03
TSPAN1-205ENST00000472170 CUX2O14529 1486 aa15.2■□□□□ 0.02
TSPAN1-205ENST00000472170 TOP2AP11388 1531 aaKnown RBP15.16■□□□□ 0.02
TSPAN1-205ENST00000472170 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
TSPAN1-205ENST00000472170 CFTRP13569 1480 aa15.04■□□□□ -0
TSPAN1-205ENST00000472170 CEP164Q9UPV0 1460 aa15.02■□□□□ -0
TSPAN1-205ENST00000472170 FANCD2Q9BXW9 1451 aa15.01□□□□□ -0.01
TSPAN1-205ENST00000472170 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
TSPAN1-205ENST00000472170 CCDC88BA6NC98 1476 aa15□□□□□ -0.01
TSPAN1-205ENST00000472170 THOC2Q8NI27 1593 aaKnown RBP14.99□□□□□ -0.01
TSPAN1-205ENST00000472170 SUPT5HO00267 1087 aaKnown RBP14.97□□□□□ -0.01
TSPAN1-205ENST00000472170 WDR62O43379 1518 aa14.91□□□□□ -0.02
TSPAN1-205ENST00000472170 PRDM2Q13029 1718 aa14.9□□□□□ -0.02
TSPAN1-205ENST00000472170 TRIM41Q8WV44 630 aa14.9□□□□□ -0.02
TSPAN1-205ENST00000472170 ABCC8Q09428 1581 aa14.85□□□□□ -0.03
TSPAN1-205ENST00000472170 URB2Q14146 1524 aaKnown RBP14.8□□□□□ -0.04
TSPAN1-205ENST00000472170 TOPBP1Q92547 1522 aa14.72□□□□□ -0.05
TSPAN1-205ENST00000472170 IFT140Q96RY7 1462 aa14.72□□□□□ -0.05
TSPAN1-205ENST00000472170 DNMBPQ6XZF7 1577 aa14.7□□□□□ -0.06
TSPAN1-205ENST00000472170 OSCARQ8IYS5 282 aa14.7□□□□□ -0.06
TSPAN1-205ENST00000472170 SOGA1O94964 1423 aa14.62□□□□□ -0.07
TSPAN1-205ENST00000472170 ZNF608Q9ULD9 1512 aaPredicted RBP14.58□□□□□ -0.08
TSPAN1-205ENST00000472170 POLA1P09884 1462 aaPredicted RBP14.57□□□□□ -0.08
TSPAN1-205ENST00000472170 FBLN2P98095 1184 aa14.56□□□□□ -0.08
TSPAN1-205ENST00000472170 AQRO60306 1485 aaKnown RBP eCLIP14.54□□□□□ -0.08
TSPAN1-205ENST00000472170 FGD5Q6ZNL6 1462 aa14.54□□□□□ -0.08
TSPAN1-205ENST00000472170 TARBP1Q13395 1621 aaKnown RBP14.52□□□□□ -0.08
TSPAN1-205ENST00000472170 CUX1P39880 1505 aa14.52□□□□□ -0.08
TSPAN1-205ENST00000472170 RAD54L2Q9Y4B4 1467 aa14.52□□□□□ -0.08
TSPAN1-205ENST00000472170 TDRD9Q8NDG6 1382 aaKnown RBP14.52□□□□□ -0.08
TSPAN1-205ENST00000472170 EIF4G3O43432 1585 aaKnown RBP14.51□□□□□ -0.09
TSPAN1-205ENST00000472170 CHMP7Q8WUX9 453 aaPredicted RBP14.5□□□□□ -0.09
TSPAN1-205ENST00000472170 WDR97A6NE52 1622 aa14.48□□□□□ -0.09
TSPAN1-205ENST00000472170 WRNQ14191 1432 aaPredicted RBP eCLIP14.48□□□□□ -0.09
TSPAN1-205ENST00000472170 GRIN2BQ13224 1484 aa14.44□□□□□ -0.1
TSPAN1-205ENST00000472170 GAPVD1Q14C86 1478 aa14.42□□□□□ -0.1
TSPAN1-205ENST00000472170 MAGI1Q96QZ7 1491 aaPredicted RBP14.4□□□□□ -0.1
TSPAN1-205ENST00000472170 TOP2BQ02880 1626 aa14.4□□□□□ -0.1
TSPAN1-205ENST00000472170 ABCA10Q8WWZ4 1543 aa14.4□□□□□ -0.1
TSPAN1-205ENST00000472170 SNAPC4Q5SXM2 1469 aa14.38□□□□□ -0.11
TSPAN1-205ENST00000472170 CHD1O14646 1710 aa14.38□□□□□ -0.11
TSPAN1-205ENST00000472170 BIVM-ERCC5R4GMW8 1640 aa14.37□□□□□ -0.11
TSPAN1-205ENST00000472170 SYNJ2O15056 1496 aa14.34□□□□□ -0.11
TSPAN1-205ENST00000472170 SYNJ1O43426 1573 aa14.33□□□□□ -0.12
TSPAN1-205ENST00000472170 RIMBP3CA6NJZ7 1639 aa14.33□□□□□ -0.12
TSPAN1-205ENST00000472170 RIMBP3BA6NNM3 1639 aa14.33□□□□□ -0.12
TSPAN1-205ENST00000472170 RIMBP3Q9UFD9 1639 aa14.33□□□□□ -0.12
TSPAN1-205ENST00000472170 PBRM1Q86U86 1689 aa14.33□□□□□ -0.12
TSPAN1-205ENST00000472170 CYB5RLQ6IPT4 315 aa14.3□□□□□ -0.12
TSPAN1-205ENST00000472170 ABCA5Q8WWZ7 1642 aa14.29□□□□□ -0.12
TSPAN1-205ENST00000472170 ARHGEF11O15085 1522 aa14.27□□□□□ -0.12
TSPAN1-205ENST00000472170 FHAD1B1AJZ9 1412 aa14.25□□□□□ -0.13
TSPAN1-205ENST00000472170 ERICH3Q5RHP9 1530 aa14.25□□□□□ -0.13
TSPAN1-205ENST00000472170 KIF27Q86VH2 1401 aa14.24□□□□□ -0.13
TSPAN1-205ENST00000472170 TRHP20396 242 aaPredicted RBP14.23□□□□□ -0.13
TSPAN1-205ENST00000472170 GRIN2AQ12879 1464 aa14.2□□□□□ -0.14
TSPAN1-205ENST00000472170 CLASP1Q7Z460 1538 aa14.17□□□□□ -0.14
TSPAN1-205ENST00000472170 ADAMTS12P58397 1594 aa14.17□□□□□ -0.14
TSPAN1-205ENST00000472170 IGF1RP08069 1367 aa14.13□□□□□ -0.15
TSPAN1-205ENST00000472170 JPH4Q96JJ6 628 aa14.13□□□□□ -0.15
TSPAN1-205ENST00000472170 NUP160Q12769 1436 aa14.12□□□□□ -0.15
TSPAN1-205ENST00000472170 ARAP1Q96P48 1450 aa14.11□□□□□ -0.15
TSPAN1-205ENST00000472170 CARMIL1Q5VZK9 1371 aa14.1□□□□□ -0.15
TSPAN1-205ENST00000472170 CUL7Q14999 1698 aa14.1□□□□□ -0.15
TSPAN1-205ENST00000472170 CEP170Q5SW79 1584 aa14.08□□□□□ -0.16
TSPAN1-205ENST00000472170 NPM1P06748 294 aaKnown RBP eCLIP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms