RNA–Protein interactions for RNA: ENST00000472151.1

ERCC5-204, Transcript of ERCC excision repair 5, endonuclease, humanhuman

TSL 3

Gene ERCC5, Length 635 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC5-204ENST00000472151 NISCHQ9Y2I1 1504 aa40.55■■■■■ 4.08
ERCC5-204ENST00000472151 CCDC180Q9P1Z9 1646 aa36.01■■■■□ 3.35
ERCC5-204ENST00000472151 ABCC9O60706 1549 aa35.54■■■■□ 3.28
ERCC5-204ENST00000472151 DCAF8L2P0C7V8 631 aa34.12■■■■□ 3.05
ERCC5-204ENST00000472151 RB1CC1Q8TDY2 1594 aa33.97■■■■□ 3.03
ERCC5-204ENST00000472151 NACADO15069 1562 aa33.88■■■■□ 3.01
ERCC5-204ENST00000472151 ZCCHC6Q5VYS8 1495 aaKnown RBP33.74■■■□□ 2.99
ERCC5-204ENST00000472151 MYO15BQ96JP2 1530 aa33.54■■■□□ 2.96
ERCC5-204ENST00000472151 DCAF1Q9Y4B6 1507 aa33.41■■■□□ 2.94
ERCC5-204ENST00000472151 UNC13AQ9UPW8 1703 aa33.36■■■□□ 2.93
ERCC5-204ENST00000472151 PABPN1Q86U42 306 aaKnown RBP eCLIP33.26■■■□□ 2.91
ERCC5-204ENST00000472151 BICRAQ9NZM4 1560 aa33.06■■■□□ 2.88
ERCC5-204ENST00000472151 SCRIBQ14160 1630 aa33.04■■■□□ 2.88
ERCC5-204ENST00000472151 DNAJC5BQ9UF47 199 aa32.81■■■□□ 2.84
ERCC5-204ENST00000472151 SHROOM4Q9ULL8 1493 aa32.42■■■□□ 2.78
ERCC5-204ENST00000472151 EIF4G1Q04637 1599 aaKnown RBP32.15■■■□□ 2.74
ERCC5-204ENST00000472151 CC2D2AQ9P2K1 1620 aa32.08■■■□□ 2.73
ERCC5-204ENST00000472151 CECR2Q9BXF3 1484 aa31.86■■■□□ 2.69
ERCC5-204ENST00000472151 SMARCA4P51532 1647 aa31.5■■■□□ 2.63
ERCC5-204ENST00000472151 BAZ1AQ9NRL2 1556 aaPredicted RBP31.39■■■□□ 2.61
ERCC5-204ENST00000472151 ATAD2BQ9ULI0 1458 aa31.35■■■□□ 2.61
ERCC5-204ENST00000472151 MROH2BQ7Z745 1585 aa31.34■■■□□ 2.61
ERCC5-204ENST00000472151 NCAPD3P42695 1498 aa31.28■■■□□ 2.6
ERCC5-204ENST00000472151 SMARCA2P51531 1590 aa31.23■■■□□ 2.59
ERCC5-204ENST00000472151 HMGXB3Q12766 1538 aa31.1■■■□□ 2.57
ERCC5-204ENST00000472151 PEG3Q9GZU2 1588 aa31.09■■■□□ 2.57
ERCC5-204ENST00000472151 BAZ1BQ9UIG0 1483 aaKnown RBP31.08■■■□□ 2.57
ERCC5-204ENST00000472151 WIZO95785 1651 aa31.03■■■□□ 2.56
ERCC5-204ENST00000472151 RSF1Q96T23 1441 aaPredicted RBP30.9■■■□□ 2.54
ERCC5-204ENST00000472151 NESP48681 1621 aa30.76■■■□□ 2.51
ERCC5-204ENST00000472151 TOP2AP11388 1531 aaKnown RBP30.57■■■□□ 2.48
ERCC5-204ENST00000472151 ERCC6Q03468 1493 aa30.55■■■□□ 2.48
ERCC5-204ENST00000472151 LAMC3Q9Y6N6 1575 aa30.46■■■□□ 2.47
ERCC5-204ENST00000472151 CADPSQ9ULU8 1353 aa30.41■■■□□ 2.46
ERCC5-204ENST00000472151 KIF21AQ7Z4S6 1674 aa30.35■■■□□ 2.45
ERCC5-204ENST00000472151 CCDC88BA6NC98 1476 aa30.28■■■□□ 2.44
ERCC5-204ENST00000472151 PDS5BQ9NTI5 1447 aa30.26■■■□□ 2.43
ERCC5-204ENST00000472151 THOC2Q8NI27 1593 aaKnown RBP30.2■■■□□ 2.42
ERCC5-204ENST00000472151 CFTRP13569 1480 aa30.19■■■□□ 2.42
ERCC5-204ENST00000472151 SUPT5HO00267 1087 aaKnown RBP30.19■■■□□ 2.42
ERCC5-204ENST00000472151 CUX2O14529 1486 aa30.16■■■□□ 2.42
ERCC5-204ENST00000472151 FANCD2Q9BXW9 1451 aa30.09■■■□□ 2.41
ERCC5-204ENST00000472151 CEP164Q9UPV0 1460 aa30.03■■■□□ 2.4
ERCC5-204ENST00000472151 MRC2Q9UBG0 1479 aa30.01■■■□□ 2.4
ERCC5-204ENST00000472151 PRDM2Q13029 1718 aa29.97■■■□□ 2.39
ERCC5-204ENST00000472151 WDR62O43379 1518 aa29.9■■■□□ 2.38
ERCC5-204ENST00000472151 URB2Q14146 1524 aaKnown RBP29.84■■■□□ 2.37
ERCC5-204ENST00000472151 TOPBP1Q92547 1522 aa29.61■■■□□ 2.33
ERCC5-204ENST00000472151 DNMBPQ6XZF7 1577 aa29.52■■■□□ 2.32
ERCC5-204ENST00000472151 DNAJC5Q9H3Z4 198 aa29.47■■■□□ 2.31
ERCC5-204ENST00000472151 ABCC8Q09428 1581 aa29.45■■■□□ 2.31
ERCC5-204ENST00000472151 ZNF608Q9ULD9 1512 aaPredicted RBP29.4■■■□□ 2.3
ERCC5-204ENST00000472151 CUX1P39880 1505 aa29.39■■■□□ 2.3
ERCC5-204ENST00000472151 IFT140Q96RY7 1462 aa29.38■■■□□ 2.29
ERCC5-204ENST00000472151 POLA1P09884 1462 aaPredicted RBP29.35■■■□□ 2.29
ERCC5-204ENST00000472151 RAD54L2Q9Y4B4 1467 aa29.31■■■□□ 2.28
ERCC5-204ENST00000472151 TARBP1Q13395 1621 aaKnown RBP29.3■■■□□ 2.28
ERCC5-204ENST00000472151 FGD5Q6ZNL6 1462 aa29.29■■■□□ 2.28
ERCC5-204ENST00000472151 SOGA1O94964 1423 aa29.23■■■□□ 2.27
ERCC5-204ENST00000472151 AQRO60306 1485 aaKnown RBP eCLIP29.22■■■□□ 2.27
ERCC5-204ENST00000472151 EIF4G3O43432 1585 aaKnown RBP29.21■■■□□ 2.27
ERCC5-204ENST00000472151 TDRD9Q8NDG6 1382 aaKnown RBP29.15■■■□□ 2.26
ERCC5-204ENST00000472151 SYNJ1O43426 1573 aa29.12■■■□□ 2.25
ERCC5-204ENST00000472151 WRNQ14191 1432 aaPredicted RBP eCLIP29.11■■■□□ 2.25
ERCC5-204ENST00000472151 TOP2BQ02880 1626 aa29.04■■■□□ 2.24
ERCC5-204ENST00000472151 BIVM-ERCC5R4GMW8 1640 aa29.04■■■□□ 2.24
ERCC5-204ENST00000472151 WDR97A6NE52 1622 aa29.02■■■□□ 2.24
ERCC5-204ENST00000472151 OSCARQ8IYS5 282 aa28.98■■■□□ 2.23
ERCC5-204ENST00000472151 ABCA10Q8WWZ4 1543 aa28.93■■■□□ 2.22
ERCC5-204ENST00000472151 CHD1O14646 1710 aa28.92■■■□□ 2.22
ERCC5-204ENST00000472151 FBLN2P98095 1184 aa28.91■■■□□ 2.22
ERCC5-204ENST00000472151 SNAPC4Q5SXM2 1469 aa28.9■■■□□ 2.22
ERCC5-204ENST00000472151 GAPVD1Q14C86 1478 aa28.87■■■□□ 2.21
ERCC5-204ENST00000472151 PBRM1Q86U86 1689 aa28.86■■■□□ 2.21
ERCC5-204ENST00000472151 GRIN2BQ13224 1484 aa28.85■■■□□ 2.21
ERCC5-204ENST00000472151 ABCA5Q8WWZ7 1642 aa28.85■■■□□ 2.21
ERCC5-204ENST00000472151 MAGI1Q96QZ7 1491 aaPredicted RBP28.75■■■□□ 2.19
ERCC5-204ENST00000472151 CHMP7Q8WUX9 453 aaPredicted RBP28.73■■■□□ 2.19
ERCC5-204ENST00000472151 SYNJ2O15056 1496 aa28.66■■■□□ 2.18
ERCC5-204ENST00000472151 TRIM41Q8WV44 630 aa28.6■■■□□ 2.17
ERCC5-204ENST00000472151 ADAMTS12P58397 1594 aa28.59■■■□□ 2.17
ERCC5-204ENST00000472151 RIMBP3CA6NJZ7 1639 aa28.58■■■□□ 2.17
ERCC5-204ENST00000472151 RIMBP3BA6NNM3 1639 aa28.58■■■□□ 2.17
ERCC5-204ENST00000472151 RIMBP3Q9UFD9 1639 aa28.58■■■□□ 2.17
ERCC5-204ENST00000472151 ERICH3Q5RHP9 1530 aa28.54■■■□□ 2.16
ERCC5-204ENST00000472151 ARHGEF11O15085 1522 aa28.53■■■□□ 2.16
ERCC5-204ENST00000472151 CLASP1Q7Z460 1538 aa28.52■■■□□ 2.16
ERCC5-204ENST00000472151 GRIN2AQ12879 1464 aa28.5■■■□□ 2.15
ERCC5-204ENST00000472151 FHAD1B1AJZ9 1412 aa28.5■■■□□ 2.15
ERCC5-204ENST00000472151 KIF27Q86VH2 1401 aa28.47■■■□□ 2.15
ERCC5-204ENST00000472151 IGF1RP08069 1367 aa28.43■■■□□ 2.14
ERCC5-204ENST00000472151 CEP170Q5SW79 1584 aa28.42■■■□□ 2.14
ERCC5-204ENST00000472151 RUSC2Q8N2Y8 1516 aa28.38■■■□□ 2.13
ERCC5-204ENST00000472151 CYB5RLQ6IPT4 315 aa28.36■■■□□ 2.13
ERCC5-204ENST00000472151 NUP160Q12769 1436 aa28.35■■■□□ 2.13
ERCC5-204ENST00000472151 ARAP1Q96P48 1450 aa28.33■■■□□ 2.13
ERCC5-204ENST00000472151 CUL7Q14999 1698 aa28.27■■■□□ 2.12
ERCC5-204ENST00000472151 ERCC6L2Q5T890 1561 aa28.27■■■□□ 2.12
ERCC5-204ENST00000472151 CARMIL1Q5VZK9 1371 aa28.25■■■□□ 2.11
ERCC5-204ENST00000472151 SHROOM2Q13796 1616 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms