RNA–Protein interactions for RNA: ENST00000472064.1

CHI3L1-203, Transcript of chitinase 3 like 1, humanhuman

TSL 2

Gene CHI3L1, Length 890 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHI3L1-203ENST00000472064 NISCHQ9Y2I1 1504 aa29.84■■■□□ 2.37
CHI3L1-203ENST00000472064 CCDC180Q9P1Z9 1646 aa26.78■■□□□ 1.88
CHI3L1-203ENST00000472064 ABCC9O60706 1549 aa26.65■■□□□ 1.86
CHI3L1-203ENST00000472064 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
CHI3L1-203ENST00000472064 NACADO15069 1562 aa25.28■■□□□ 1.64
CHI3L1-203ENST00000472064 DCAF8L2P0C7V8 631 aa25.14■■□□□ 1.62
CHI3L1-203ENST00000472064 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
CHI3L1-203ENST00000472064 UNC13AQ9UPW8 1703 aa24.88■■□□□ 1.57
CHI3L1-203ENST00000472064 DNAJC5BQ9UF47 199 aa24.87■■□□□ 1.57
CHI3L1-203ENST00000472064 PABPN1Q86U42 306 aaKnown RBP eCLIP24.81■■□□□ 1.56
CHI3L1-203ENST00000472064 ZCCHC6Q5VYS8 1495 aaKnown RBP24.76■■□□□ 1.55
CHI3L1-203ENST00000472064 DCAF1Q9Y4B6 1507 aa24.66■■□□□ 1.54
CHI3L1-203ENST00000472064 BICRAQ9NZM4 1560 aa24.66■■□□□ 1.54
CHI3L1-203ENST00000472064 SCRIBQ14160 1630 aa24.39■■□□□ 1.49
CHI3L1-203ENST00000472064 SHROOM4Q9ULL8 1493 aa24.37■■□□□ 1.49
CHI3L1-203ENST00000472064 CC2D2AQ9P2K1 1620 aa24.1■■□□□ 1.45
CHI3L1-203ENST00000472064 EIF4G1Q04637 1599 aaKnown RBP24.07■■□□□ 1.44
CHI3L1-203ENST00000472064 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
CHI3L1-203ENST00000472064 NCAPD3P42695 1498 aa23.31■■□□□ 1.32
CHI3L1-203ENST00000472064 SMARCA4P51532 1647 aa23.27■■□□□ 1.32
CHI3L1-203ENST00000472064 ATAD2BQ9ULI0 1458 aa23.25■■□□□ 1.31
CHI3L1-203ENST00000472064 SMARCA2P51531 1590 aa23.23■■□□□ 1.31
CHI3L1-203ENST00000472064 BAZ1AQ9NRL2 1556 aaPredicted RBP23.18■■□□□ 1.3
CHI3L1-203ENST00000472064 HMGXB3Q12766 1538 aa23.17■■□□□ 1.3
CHI3L1-203ENST00000472064 BAZ1BQ9UIG0 1483 aaKnown RBP23.05■■□□□ 1.28
CHI3L1-203ENST00000472064 PEG3Q9GZU2 1588 aa23.04■■□□□ 1.28
CHI3L1-203ENST00000472064 ERCC6Q03468 1493 aa23.03■■□□□ 1.28
CHI3L1-203ENST00000472064 MROH2BQ7Z745 1585 aa22.98■■□□□ 1.27
CHI3L1-203ENST00000472064 CUX2O14529 1486 aa22.95■■□□□ 1.26
CHI3L1-203ENST00000472064 NESP48681 1621 aa22.91■■□□□ 1.26
CHI3L1-203ENST00000472064 LAMC3Q9Y6N6 1575 aa22.8■■□□□ 1.24
CHI3L1-203ENST00000472064 DNAJC5Q9H3Z4 198 aa22.8■■□□□ 1.24
CHI3L1-203ENST00000472064 WIZO95785 1651 aa22.73■■□□□ 1.23
CHI3L1-203ENST00000472064 THOC2Q8NI27 1593 aaKnown RBP22.69■■□□□ 1.22
CHI3L1-203ENST00000472064 KIF21AQ7Z4S6 1674 aa22.66■■□□□ 1.22
CHI3L1-203ENST00000472064 PDS5BQ9NTI5 1447 aa22.65■■□□□ 1.22
CHI3L1-203ENST00000472064 CADPSQ9ULU8 1353 aa22.61■■□□□ 1.21
CHI3L1-203ENST00000472064 RSF1Q96T23 1441 aaPredicted RBP22.53■■□□□ 1.2
CHI3L1-203ENST00000472064 TOP2AP11388 1531 aaKnown RBP22.46■■□□□ 1.19
CHI3L1-203ENST00000472064 MRC2Q9UBG0 1479 aa22.45■■□□□ 1.18
CHI3L1-203ENST00000472064 WDR62O43379 1518 aa22.4■■□□□ 1.18
CHI3L1-203ENST00000472064 CEP164Q9UPV0 1460 aa22.39■■□□□ 1.17
CHI3L1-203ENST00000472064 CFTRP13569 1480 aa22.37■■□□□ 1.17
CHI3L1-203ENST00000472064 FANCD2Q9BXW9 1451 aa22.36■■□□□ 1.17
CHI3L1-203ENST00000472064 PRDM2Q13029 1718 aa22.23■■□□□ 1.15
CHI3L1-203ENST00000472064 CCDC88BA6NC98 1476 aa22.18■■□□□ 1.14
CHI3L1-203ENST00000472064 URB2Q14146 1524 aaKnown RBP22.16■■□□□ 1.14
CHI3L1-203ENST00000472064 TOPBP1Q92547 1522 aa21.95■■□□□ 1.1
CHI3L1-203ENST00000472064 IFT140Q96RY7 1462 aa21.93■■□□□ 1.1
CHI3L1-203ENST00000472064 ABCC8Q09428 1581 aa21.92■■□□□ 1.1
CHI3L1-203ENST00000472064 OSCARQ8IYS5 282 aa21.9■■□□□ 1.1
CHI3L1-203ENST00000472064 DNMBPQ6XZF7 1577 aa21.89■■□□□ 1.09
CHI3L1-203ENST00000472064 ZNF608Q9ULD9 1512 aaPredicted RBP21.87■■□□□ 1.09
CHI3L1-203ENST00000472064 TRIM41Q8WV44 630 aa21.85■■□□□ 1.09
CHI3L1-203ENST00000472064 EIF4G3O43432 1585 aaKnown RBP21.78■■□□□ 1.08
CHI3L1-203ENST00000472064 TARBP1Q13395 1621 aaKnown RBP21.75■■□□□ 1.07
CHI3L1-203ENST00000472064 POLA1P09884 1462 aaPredicted RBP21.73■■□□□ 1.07
CHI3L1-203ENST00000472064 AQRO60306 1485 aaKnown RBP eCLIP21.68■■□□□ 1.06
CHI3L1-203ENST00000472064 RAD54L2Q9Y4B4 1467 aa21.64■■□□□ 1.05
CHI3L1-203ENST00000472064 SOGA1O94964 1423 aa21.63■■□□□ 1.05
CHI3L1-203ENST00000472064 RIMBP3CA6NJZ7 1639 aa21.62■■□□□ 1.05
CHI3L1-203ENST00000472064 RIMBP3BA6NNM3 1639 aa21.62■■□□□ 1.05
CHI3L1-203ENST00000472064 RIMBP3Q9UFD9 1639 aa21.62■■□□□ 1.05
CHI3L1-203ENST00000472064 CHD1O14646 1710 aa21.62■■□□□ 1.05
CHI3L1-203ENST00000472064 FGD5Q6ZNL6 1462 aa21.61■■□□□ 1.05
CHI3L1-203ENST00000472064 SUPT5HO00267 1087 aaKnown RBP21.61■■□□□ 1.05
CHI3L1-203ENST00000472064 CUX1P39880 1505 aa21.6■■□□□ 1.05
CHI3L1-203ENST00000472064 WDR97A6NE52 1622 aa21.57■■□□□ 1.04
CHI3L1-203ENST00000472064 TDRD9Q8NDG6 1382 aaKnown RBP21.56■■□□□ 1.04
CHI3L1-203ENST00000472064 ARHGEF11O15085 1522 aa21.55■■□□□ 1.04
CHI3L1-203ENST00000472064 FBLN2P98095 1184 aa21.54■■□□□ 1.04
CHI3L1-203ENST00000472064 SNAPC4Q5SXM2 1469 aa21.49■■□□□ 1.03
CHI3L1-203ENST00000472064 MAGI1Q96QZ7 1491 aaPredicted RBP21.45■■□□□ 1.02
CHI3L1-203ENST00000472064 GRIN2BQ13224 1484 aa21.44■■□□□ 1.02
CHI3L1-203ENST00000472064 PBRM1Q86U86 1689 aa21.4■■□□□ 1.02
CHI3L1-203ENST00000472064 CHMP7Q8WUX9 453 aaPredicted RBP21.39■■□□□ 1.01
CHI3L1-203ENST00000472064 CYB5RLQ6IPT4 315 aa21.38■■□□□ 1.01
CHI3L1-203ENST00000472064 GAPVD1Q14C86 1478 aa21.38■■□□□ 1.01
CHI3L1-203ENST00000472064 SYNJ1O43426 1573 aa21.37■■□□□ 1.01
CHI3L1-203ENST00000472064 ABCA10Q8WWZ4 1543 aa21.37■■□□□ 1.01
CHI3L1-203ENST00000472064 SYNJ2O15056 1496 aa21.36■■□□□ 1.01
CHI3L1-203ENST00000472064 CLASP1Q7Z460 1538 aa21.34■■□□□ 1.01
CHI3L1-203ENST00000472064 ARAP1Q96P48 1450 aa21.34■■□□□ 1.01
CHI3L1-203ENST00000472064 ABCA5Q8WWZ7 1642 aa21.34■■□□□ 1.01
CHI3L1-203ENST00000472064 BIVM-ERCC5R4GMW8 1640 aa21.3■■□□□ 1
CHI3L1-203ENST00000472064 WRNQ14191 1432 aaPredicted RBP eCLIP21.29■■□□□ 1
CHI3L1-203ENST00000472064 TOP2BQ02880 1626 aa21.29■■□□□ 1
CHI3L1-203ENST00000472064 ADAMTS12P58397 1594 aa21.18■□□□□ 0.98
CHI3L1-203ENST00000472064 GRIN2AQ12879 1464 aa21.16■□□□□ 0.98
CHI3L1-203ENST00000472064 TRHP20396 242 aaPredicted RBP21.13■□□□□ 0.97
CHI3L1-203ENST00000472064 ERICH3Q5RHP9 1530 aa21.11■□□□□ 0.97
CHI3L1-203ENST00000472064 FHAD1B1AJZ9 1412 aa21.11■□□□□ 0.97
CHI3L1-203ENST00000472064 CEP170Q5SW79 1584 aa21.09■□□□□ 0.97
CHI3L1-203ENST00000472064 NUP160Q12769 1436 aa21.08■□□□□ 0.97
CHI3L1-203ENST00000472064 ERCC6L2Q5T890 1561 aa21.01■□□□□ 0.95
CHI3L1-203ENST00000472064 SHROOM2Q13796 1616 aa20.99■□□□□ 0.95
CHI3L1-203ENST00000472064 KIF27Q86VH2 1401 aa20.88■□□□□ 0.93
CHI3L1-203ENST00000472064 RUSC2Q8N2Y8 1516 aa20.88■□□□□ 0.93
CHI3L1-203ENST00000472064 PRG4Q92954 1404 aaPredicted RBP20.87■□□□□ 0.93
CHI3L1-203ENST00000472064 JPH4Q96JJ6 628 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms