RNA–Protein interactions for RNA: ENST00000471890.6

PFKFB4-211, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, humanhuman

TSL 4

Gene PFKFB4, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB4-211ENST00000471890 NISCHQ9Y2I1 1504 aa34.16■■■■□ 3.06
PFKFB4-211ENST00000471890 CCDC180Q9P1Z9 1646 aa30.56■■■□□ 2.48
PFKFB4-211ENST00000471890 ABCC9O60706 1549 aa30.32■■■□□ 2.44
PFKFB4-211ENST00000471890 RB1CC1Q8TDY2 1594 aa28.98■■■□□ 2.23
PFKFB4-211ENST00000471890 NACADO15069 1562 aa28.85■■■□□ 2.21
PFKFB4-211ENST00000471890 DCAF8L2P0C7V8 631 aa28.67■■■□□ 2.18
PFKFB4-211ENST00000471890 MYO15BQ96JP2 1530 aa28.56■■■□□ 2.16
PFKFB4-211ENST00000471890 ZCCHC6Q5VYS8 1495 aaKnown RBP28.36■■■□□ 2.13
PFKFB4-211ENST00000471890 UNC13AQ9UPW8 1703 aa28.33■■■□□ 2.13
PFKFB4-211ENST00000471890 DNAJC5BQ9UF47 199 aa28.28■■■□□ 2.12
PFKFB4-211ENST00000471890 PABPN1Q86U42 306 aaKnown RBP eCLIP28.27■■■□□ 2.12
PFKFB4-211ENST00000471890 DCAF1Q9Y4B6 1507 aa28.26■■■□□ 2.11
PFKFB4-211ENST00000471890 BICRAQ9NZM4 1560 aa28.14■■■□□ 2.1
PFKFB4-211ENST00000471890 SCRIBQ14160 1630 aa27.83■■■□□ 2.05
PFKFB4-211ENST00000471890 SHROOM4Q9ULL8 1493 aa27.81■■■□□ 2.04
PFKFB4-211ENST00000471890 CC2D2AQ9P2K1 1620 aa27.42■■□□□ 1.98
PFKFB4-211ENST00000471890 EIF4G1Q04637 1599 aaKnown RBP27.42■■□□□ 1.98
PFKFB4-211ENST00000471890 CECR2Q9BXF3 1484 aa27.31■■□□□ 1.96
PFKFB4-211ENST00000471890 NCAPD3P42695 1498 aa26.64■■□□□ 1.86
PFKFB4-211ENST00000471890 SMARCA4P51532 1647 aa26.59■■□□□ 1.85
PFKFB4-211ENST00000471890 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.85
PFKFB4-211ENST00000471890 SMARCA2P51531 1590 aa26.51■■□□□ 1.83
PFKFB4-211ENST00000471890 BAZ1AQ9NRL2 1556 aaPredicted RBP26.5■■□□□ 1.83
PFKFB4-211ENST00000471890 HMGXB3Q12766 1538 aa26.45■■□□□ 1.83
PFKFB4-211ENST00000471890 PEG3Q9GZU2 1588 aa26.37■■□□□ 1.81
PFKFB4-211ENST00000471890 MROH2BQ7Z745 1585 aa26.32■■□□□ 1.8
PFKFB4-211ENST00000471890 BAZ1BQ9UIG0 1483 aaKnown RBP26.31■■□□□ 1.8
PFKFB4-211ENST00000471890 ERCC6Q03468 1493 aa26.17■■□□□ 1.78
PFKFB4-211ENST00000471890 NESP48681 1621 aa26.12■■□□□ 1.77
PFKFB4-211ENST00000471890 CUX2O14529 1486 aa26.08■■□□□ 1.77
PFKFB4-211ENST00000471890 WIZO95785 1651 aa26■■□□□ 1.75
PFKFB4-211ENST00000471890 LAMC3Q9Y6N6 1575 aa25.99■■□□□ 1.75
PFKFB4-211ENST00000471890 RSF1Q96T23 1441 aaPredicted RBP25.86■■□□□ 1.73
PFKFB4-211ENST00000471890 CADPSQ9ULU8 1353 aa25.83■■□□□ 1.73
PFKFB4-211ENST00000471890 PDS5BQ9NTI5 1447 aa25.83■■□□□ 1.73
PFKFB4-211ENST00000471890 THOC2Q8NI27 1593 aaKnown RBP25.82■■□□□ 1.72
PFKFB4-211ENST00000471890 DNAJC5Q9H3Z4 198 aa25.82■■□□□ 1.72
PFKFB4-211ENST00000471890 KIF21AQ7Z4S6 1674 aa25.78■■□□□ 1.72
PFKFB4-211ENST00000471890 TOP2AP11388 1531 aaKnown RBP25.7■■□□□ 1.7
PFKFB4-211ENST00000471890 CFTRP13569 1480 aa25.59■■□□□ 1.69
PFKFB4-211ENST00000471890 MRC2Q9UBG0 1479 aa25.59■■□□□ 1.69
PFKFB4-211ENST00000471890 WDR62O43379 1518 aa25.53■■□□□ 1.68
PFKFB4-211ENST00000471890 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
PFKFB4-211ENST00000471890 CEP164Q9UPV0 1460 aa25.53■■□□□ 1.68
PFKFB4-211ENST00000471890 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
PFKFB4-211ENST00000471890 PRDM2Q13029 1718 aa25.33■■□□□ 1.65
PFKFB4-211ENST00000471890 URB2Q14146 1524 aaKnown RBP25.31■■□□□ 1.64
PFKFB4-211ENST00000471890 TOPBP1Q92547 1522 aa25.07■■□□□ 1.6
PFKFB4-211ENST00000471890 ABCC8Q09428 1581 aa25.04■■□□□ 1.6
PFKFB4-211ENST00000471890 IFT140Q96RY7 1462 aa25.02■■□□□ 1.6
PFKFB4-211ENST00000471890 DNMBPQ6XZF7 1577 aa24.99■■□□□ 1.59
PFKFB4-211ENST00000471890 ZNF608Q9ULD9 1512 aaPredicted RBP24.95■■□□□ 1.58
PFKFB4-211ENST00000471890 OSCARQ8IYS5 282 aa24.91■■□□□ 1.58
PFKFB4-211ENST00000471890 TARBP1Q13395 1621 aaKnown RBP24.83■■□□□ 1.57
PFKFB4-211ENST00000471890 POLA1P09884 1462 aaPredicted RBP24.83■■□□□ 1.56
PFKFB4-211ENST00000471890 SUPT5HO00267 1087 aaKnown RBP24.82■■□□□ 1.56
PFKFB4-211ENST00000471890 EIF4G3O43432 1585 aaKnown RBP24.81■■□□□ 1.56
PFKFB4-211ENST00000471890 AQRO60306 1485 aaKnown RBP eCLIP24.75■■□□□ 1.554e-7■■■■□ 26.5
PFKFB4-211ENST00000471890 RAD54L2Q9Y4B4 1467 aa24.72■■□□□ 1.55
PFKFB4-211ENST00000471890 CUX1P39880 1505 aa24.71■■□□□ 1.55
PFKFB4-211ENST00000471890 SOGA1O94964 1423 aa24.71■■□□□ 1.55
PFKFB4-211ENST00000471890 TRIM41Q8WV44 630 aa24.71■■□□□ 1.55
PFKFB4-211ENST00000471890 FGD5Q6ZNL6 1462 aa24.69■■□□□ 1.54
PFKFB4-211ENST00000471890 TDRD9Q8NDG6 1382 aaKnown RBP24.63■■□□□ 1.53
PFKFB4-211ENST00000471890 WDR97A6NE52 1622 aa24.61■■□□□ 1.53
PFKFB4-211ENST00000471890 CHD1O14646 1710 aa24.58■■□□□ 1.53
PFKFB4-211ENST00000471890 RIMBP3CA6NJZ7 1639 aa24.56■■□□□ 1.52
PFKFB4-211ENST00000471890 RIMBP3BA6NNM3 1639 aa24.56■■□□□ 1.52
PFKFB4-211ENST00000471890 RIMBP3Q9UFD9 1639 aa24.56■■□□□ 1.52
PFKFB4-211ENST00000471890 FBLN2P98095 1184 aa24.51■■□□□ 1.51
PFKFB4-211ENST00000471890 SNAPC4Q5SXM2 1469 aa24.51■■□□□ 1.51
PFKFB4-211ENST00000471890 ARHGEF11O15085 1522 aa24.51■■□□□ 1.51
PFKFB4-211ENST00000471890 GRIN2BQ13224 1484 aa24.48■■□□□ 1.51
PFKFB4-211ENST00000471890 MAGI1Q96QZ7 1491 aaPredicted RBP24.47■■□□□ 1.51
PFKFB4-211ENST00000471890 ABCA10Q8WWZ4 1543 aa24.45■■□□□ 1.5
PFKFB4-211ENST00000471890 GAPVD1Q14C86 1478 aa24.42■■□□□ 1.5
PFKFB4-211ENST00000471890 CHMP7Q8WUX9 453 aaPredicted RBP24.39■■□□□ 1.49
PFKFB4-211ENST00000471890 WRNQ14191 1432 aaPredicted RBP eCLIP24.38■■□□□ 1.49
PFKFB4-211ENST00000471890 PBRM1Q86U86 1689 aa24.38■■□□□ 1.49
PFKFB4-211ENST00000471890 TOP2BQ02880 1626 aa24.38■■□□□ 1.49
PFKFB4-211ENST00000471890 ABCA5Q8WWZ7 1642 aa24.38■■□□□ 1.49
PFKFB4-211ENST00000471890 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
PFKFB4-211ENST00000471890 SYNJ2O15056 1496 aa24.38■■□□□ 1.49
PFKFB4-211ENST00000471890 SYNJ1O43426 1573 aa24.34■■□□□ 1.49
PFKFB4-211ENST00000471890 CLASP1Q7Z460 1538 aa24.34■■□□□ 1.49
PFKFB4-211ENST00000471890 CYB5RLQ6IPT4 315 aa24.3■■□□□ 1.48
PFKFB4-211ENST00000471890 ARAP1Q96P48 1450 aa24.29■■□□□ 1.48
PFKFB4-211ENST00000471890 ADAMTS12P58397 1594 aa24.17■■□□□ 1.46
PFKFB4-211ENST00000471890 GRIN2AQ12879 1464 aa24.16■■□□□ 1.46
PFKFB4-211ENST00000471890 ERICH3Q5RHP9 1530 aa24.14■■□□□ 1.45
PFKFB4-211ENST00000471890 FHAD1B1AJZ9 1412 aa24.13■■□□□ 1.45
PFKFB4-211ENST00000471890 NUP160Q12769 1436 aa24.1■■□□□ 1.45
PFKFB4-211ENST00000471890 CEP170Q5SW79 1584 aa24.07■■□□□ 1.44
PFKFB4-211ENST00000471890 SHROOM2Q13796 1616 aa23.95■■□□□ 1.43
PFKFB4-211ENST00000471890 ERCC6L2Q5T890 1561 aa23.95■■□□□ 1.43
PFKFB4-211ENST00000471890 TRHP20396 242 aaPredicted RBP23.93■■□□□ 1.42
PFKFB4-211ENST00000471890 KIF27Q86VH2 1401 aa23.9■■□□□ 1.42
PFKFB4-211ENST00000471890 IGF1RP08069 1367 aa23.89■■□□□ 1.41
PFKFB4-211ENST00000471890 JPH4Q96JJ6 628 aa23.84■■□□□ 1.41
PFKFB4-211ENST00000471890 RUSC2Q8N2Y8 1516 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms