RNA–Protein interactions for RNA: ENST00000471875.5

SLC11A1-209, Transcript of solute carrier family 11 member 1, humanhuman

TSL 4

Gene SLC11A1, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC11A1-209ENST00000471875 NISCHQ9Y2I1 1504 aa38.36■■■■□ 3.73
SLC11A1-209ENST00000471875 ABCC9O60706 1549 aa34.43■■■■□ 3.1
SLC11A1-209ENST00000471875 CCDC180Q9P1Z9 1646 aa34.33■■■■□ 3.09
SLC11A1-209ENST00000471875 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.83
SLC11A1-209ENST00000471875 NACADO15069 1562 aa32.49■■■□□ 2.79
SLC11A1-209ENST00000471875 DCAF8L2P0C7V8 631 aa32.43■■■□□ 2.78
SLC11A1-209ENST00000471875 DNAJC5BQ9UF47 199 aa32.4■■■□□ 2.78
SLC11A1-209ENST00000471875 PABPN1Q86U42 306 aaKnown RBP eCLIP32.11■■■□□ 2.73
SLC11A1-209ENST00000471875 MYO15BQ96JP2 1530 aa32.05■■■□□ 2.72
SLC11A1-209ENST00000471875 UNC13AQ9UPW8 1703 aa32■■■□□ 2.71
SLC11A1-209ENST00000471875 BICRAQ9NZM4 1560 aa31.83■■■□□ 2.69
SLC11A1-209ENST00000471875 ZCCHC6Q5VYS8 1495 aaKnown RBP31.78■■■□□ 2.68
SLC11A1-209ENST00000471875 DCAF1Q9Y4B6 1507 aa31.65■■■□□ 2.66
SLC11A1-209ENST00000471875 SCRIBQ14160 1630 aa31.35■■■□□ 2.61
SLC11A1-209ENST00000471875 SHROOM4Q9ULL8 1493 aa31.28■■■□□ 2.6
SLC11A1-209ENST00000471875 CC2D2AQ9P2K1 1620 aa31.07■■■□□ 2.56
SLC11A1-209ENST00000471875 EIF4G1Q04637 1599 aaKnown RBP31■■■□□ 2.55
SLC11A1-209ENST00000471875 CECR2Q9BXF3 1484 aa30.99■■■□□ 2.55
SLC11A1-209ENST00000471875 NCAPD3P42695 1498 aa30.04■■■□□ 2.4
SLC11A1-209ENST00000471875 ATAD2BQ9ULI0 1458 aa29.95■■■□□ 2.39
SLC11A1-209ENST00000471875 SMARCA4P51532 1647 aa29.9■■■□□ 2.38
SLC11A1-209ENST00000471875 SMARCA2P51531 1590 aa29.81■■■□□ 2.36
SLC11A1-209ENST00000471875 HMGXB3Q12766 1538 aa29.76■■■□□ 2.36
SLC11A1-209ENST00000471875 BAZ1AQ9NRL2 1556 aaPredicted RBP29.73■■■□□ 2.35
SLC11A1-209ENST00000471875 DNAJC5Q9H3Z4 198 aa29.67■■■□□ 2.34
SLC11A1-209ENST00000471875 ERCC6Q03468 1493 aa29.67■■■□□ 2.34
SLC11A1-209ENST00000471875 BAZ1BQ9UIG0 1483 aaKnown RBP29.63■■■□□ 2.33
SLC11A1-209ENST00000471875 NESP48681 1621 aa29.61■■■□□ 2.33
SLC11A1-209ENST00000471875 PEG3Q9GZU2 1588 aa29.6■■■□□ 2.33
SLC11A1-209ENST00000471875 CUX2O14529 1486 aa29.6■■■□□ 2.33
SLC11A1-209ENST00000471875 MROH2BQ7Z745 1585 aa29.6■■■□□ 2.33
SLC11A1-209ENST00000471875 LAMC3Q9Y6N6 1575 aa29.31■■■□□ 2.28
SLC11A1-209ENST00000471875 THOC2Q8NI27 1593 aaKnown RBP29.24■■■□□ 2.27
SLC11A1-209ENST00000471875 WIZO95785 1651 aa29.22■■■□□ 2.27
SLC11A1-209ENST00000471875 KIF21AQ7Z4S6 1674 aa29.16■■■□□ 2.26
SLC11A1-209ENST00000471875 PDS5BQ9NTI5 1447 aa29.15■■■□□ 2.26
SLC11A1-209ENST00000471875 CADPSQ9ULU8 1353 aa29.13■■■□□ 2.25
SLC11A1-209ENST00000471875 RSF1Q96T23 1441 aaPredicted RBP28.99■■■□□ 2.23
SLC11A1-209ENST00000471875 MRC2Q9UBG0 1479 aa28.91■■■□□ 2.22
SLC11A1-209ENST00000471875 WDR62O43379 1518 aa28.84■■■□□ 2.21
SLC11A1-209ENST00000471875 TOP2AP11388 1531 aaKnown RBP28.81■■■□□ 2.2
SLC11A1-209ENST00000471875 CFTRP13569 1480 aa28.8■■■□□ 2.2
SLC11A1-209ENST00000471875 FANCD2Q9BXW9 1451 aa28.79■■■□□ 2.2
SLC11A1-209ENST00000471875 CEP164Q9UPV0 1460 aa28.78■■■□□ 2.2
SLC11A1-209ENST00000471875 URB2Q14146 1524 aaKnown RBP28.59■■■□□ 2.17
SLC11A1-209ENST00000471875 CCDC88BA6NC98 1476 aa28.53■■■□□ 2.16
SLC11A1-209ENST00000471875 PRDM2Q13029 1718 aa28.42■■■□□ 2.14
SLC11A1-209ENST00000471875 TRIM41Q8WV44 630 aa28.36■■■□□ 2.13
SLC11A1-209ENST00000471875 OSCARQ8IYS5 282 aa28.32■■■□□ 2.12
SLC11A1-209ENST00000471875 TOPBP1Q92547 1522 aa28.25■■■□□ 2.11
SLC11A1-209ENST00000471875 ZNF608Q9ULD9 1512 aaPredicted RBP28.24■■■□□ 2.11
SLC11A1-209ENST00000471875 IFT140Q96RY7 1462 aa28.22■■■□□ 2.11
SLC11A1-209ENST00000471875 ABCC8Q09428 1581 aa28.13■■■□□ 2.09
SLC11A1-209ENST00000471875 DNMBPQ6XZF7 1577 aa28.11■■■□□ 2.09
SLC11A1-209ENST00000471875 EIF4G3O43432 1585 aaKnown RBP28.02■■■□□ 2.08
SLC11A1-209ENST00000471875 TARBP1Q13395 1621 aaKnown RBP28■■■□□ 2.07
SLC11A1-209ENST00000471875 AQRO60306 1485 aaKnown RBP eCLIP27.98■■■□□ 2.07
SLC11A1-209ENST00000471875 POLA1P09884 1462 aaPredicted RBP27.96■■■□□ 2.07
SLC11A1-209ENST00000471875 RIMBP3CA6NJZ7 1639 aa27.92■■■□□ 2.06
SLC11A1-209ENST00000471875 RIMBP3BA6NNM3 1639 aa27.92■■■□□ 2.06
SLC11A1-209ENST00000471875 RIMBP3Q9UFD9 1639 aa27.92■■■□□ 2.06
SLC11A1-209ENST00000471875 RAD54L2Q9Y4B4 1467 aa27.9■■■□□ 2.06
SLC11A1-209ENST00000471875 SOGA1O94964 1423 aa27.85■■■□□ 2.05
SLC11A1-209ENST00000471875 ARHGEF11O15085 1522 aa27.84■■■□□ 2.05
SLC11A1-209ENST00000471875 TDRD9Q8NDG6 1382 aaKnown RBP27.83■■■□□ 2.05
SLC11A1-209ENST00000471875 CHD1O14646 1710 aa27.81■■■□□ 2.04
SLC11A1-209ENST00000471875 FGD5Q6ZNL6 1462 aa27.8■■■□□ 2.04
SLC11A1-209ENST00000471875 FBLN2P98095 1184 aa27.79■■■□□ 2.04
SLC11A1-209ENST00000471875 CUX1P39880 1505 aa27.78■■■□□ 2.04
SLC11A1-209ENST00000471875 SUPT5HO00267 1087 aaKnown RBP27.74■■■□□ 2.03
SLC11A1-209ENST00000471875 CYB5RLQ6IPT4 315 aa27.68■■■□□ 2.02
SLC11A1-209ENST00000471875 SNAPC4Q5SXM2 1469 aa27.66■■■□□ 2.02
SLC11A1-209ENST00000471875 WDR97A6NE52 1622 aa27.63■■■□□ 2.01
SLC11A1-209ENST00000471875 ARAP1Q96P48 1450 aa27.58■■■□□ 2.01
SLC11A1-209ENST00000471875 GRIN2BQ13224 1484 aa27.57■■■□□ 2
SLC11A1-209ENST00000471875 CHMP7Q8WUX9 453 aaPredicted RBP27.57■■■□□ 2
SLC11A1-209ENST00000471875 MAGI1Q96QZ7 1491 aaPredicted RBP27.56■■■□□ 2
SLC11A1-209ENST00000471875 CLASP1Q7Z460 1538 aa27.51■■□□□ 1.99
SLC11A1-209ENST00000471875 GAPVD1Q14C86 1478 aa27.49■■□□□ 1.99
SLC11A1-209ENST00000471875 SYNJ2O15056 1496 aa27.48■■□□□ 1.99
SLC11A1-209ENST00000471875 ABCA10Q8WWZ4 1543 aa27.46■■□□□ 1.99
SLC11A1-209ENST00000471875 SYNJ1O43426 1573 aa27.45■■□□□ 1.99
SLC11A1-209ENST00000471875 PBRM1Q86U86 1689 aa27.44■■□□□ 1.98
SLC11A1-209ENST00000471875 ABCA5Q8WWZ7 1642 aa27.41■■□□□ 1.98
SLC11A1-209ENST00000471875 WRNQ14191 1432 aaPredicted RBP eCLIP27.35■■□□□ 1.97
SLC11A1-209ENST00000471875 TRHP20396 242 aaPredicted RBP27.35■■□□□ 1.97
SLC11A1-209ENST00000471875 TOP2BQ02880 1626 aa27.3■■□□□ 1.96
SLC11A1-209ENST00000471875 BIVM-ERCC5R4GMW8 1640 aa27.3■■□□□ 1.96
SLC11A1-209ENST00000471875 GRIN2AQ12879 1464 aa27.23■■□□□ 1.95
SLC11A1-209ENST00000471875 ADAMTS12P58397 1594 aa27.19■■□□□ 1.94
SLC11A1-209ENST00000471875 CEP170Q5SW79 1584 aa27.15■■□□□ 1.94
SLC11A1-209ENST00000471875 NUP160Q12769 1436 aa27.15■■□□□ 1.94
SLC11A1-209ENST00000471875 ERCC6L2Q5T890 1561 aa27.14■■□□□ 1.94
SLC11A1-209ENST00000471875 FHAD1B1AJZ9 1412 aa27.14■■□□□ 1.93
SLC11A1-209ENST00000471875 ERICH3Q5RHP9 1530 aa27.1■■□□□ 1.93
SLC11A1-209ENST00000471875 SHROOM2Q13796 1616 aa27.01■■□□□ 1.91
SLC11A1-209ENST00000471875 PRG4Q92954 1404 aaPredicted RBP26.9■■□□□ 1.9
SLC11A1-209ENST00000471875 JPH4Q96JJ6 628 aa26.9■■□□□ 1.9
SLC11A1-209ENST00000471875 IGF1RP08069 1367 aa26.83■■□□□ 1.88
SLC11A1-209ENST00000471875 RUSC2Q8N2Y8 1516 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms